RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 HHIPL2Q6UWX4 724 aa13.58□□□□□ -0.24
TRIO-206ENST00000504606 GMLQ99445 158 aa13.58□□□□□ -0.24
TRIO-206ENST00000504606 U3KPZ7 1027 aaPredicted RBP13.58□□□□□ -0.24
TRIO-206ENST00000504606 PATL2C9JE40 543 aaKnown RBP13.57□□□□□ -0.24
TRIO-206ENST00000504606 FOXP2O15409 715 aa13.57□□□□□ -0.24
TRIO-206ENST00000504606 USP17L8P0C7I0 530 aa13.57□□□□□ -0.24
TRIO-206ENST00000504606 RPS12P25398 132 aaKnown RBP13.57□□□□□ -0.24
TRIO-206ENST00000504606 HSPA4P34932 840 aa13.57□□□□□ -0.24
TRIO-206ENST00000504606 RBM25P49756 843 aaKnown RBP13.57□□□□□ -0.24
TRIO-206ENST00000504606 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
TRIO-206ENST00000504606 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
TRIO-206ENST00000504606 SH3RF3Q8TEJ3 882 aaPredicted RBP13.57□□□□□ -0.24
TRIO-206ENST00000504606 SDR42E1Q8WUS8 393 aa13.57□□□□□ -0.24
TRIO-206ENST00000504606 MRIQ9BWK5 157 aa13.57□□□□□ -0.24
TRIO-206ENST00000504606 CRNKL1Q9BZJ0 848 aaKnown RBP13.57□□□□□ -0.24
TRIO-206ENST00000504606 SERPINA10Q9UK55 444 aa13.57□□□□□ -0.24
TRIO-206ENST00000504606 RPAP1Q9BWH6 1393 aaPredicted RBP13.57□□□□□ -0.24
TRIO-206ENST00000504606 GSG1L2A8MUP6 293 aa13.56□□□□□ -0.24
TRIO-206ENST00000504606 PLCG2P16885 1265 aa13.56□□□□□ -0.24
TRIO-206ENST00000504606 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
TRIO-206ENST00000504606 CFAP100Q494V2 611 aa13.56□□□□□ -0.24
TRIO-206ENST00000504606 IFNL3Q8IZI9 196 aa13.56□□□□□ -0.24
TRIO-206ENST00000504606 ZDHHC15Q96MV8 337 aa13.56□□□□□ -0.24
TRIO-206ENST00000504606 NACAP1Q9BZK3 213 aa13.56□□□□□ -0.24
TRIO-206ENST00000504606 SLC27A2O14975 620 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 FGAP02671 866 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 USP5P45974 858 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 TDO2P48775 406 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 GMPSP49915 693 aaPredicted RBP13.55□□□□□ -0.24
TRIO-206ENST00000504606 RNF20Q5VTR2 975 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 CREB3L3Q68CJ9 461 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
TRIO-206ENST00000504606 TEX11Q8IYF3 940 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 NAPBQ9H115 298 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 EPB41L4AQ9HCS5 686 aaPredicted RBP13.55□□□□□ -0.24
TRIO-206ENST00000504606 CTNNA3Q9UI47 895 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 PALD1Q9ULE6 856 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 PCDHAC2Q9Y5I4 1007 aa13.55□□□□□ -0.24
TRIO-206ENST00000504606 RHBDL3P58872 404 aa13.54□□□□□ -0.24
TRIO-206ENST00000504606 DLGAP5Q15398 846 aa13.54□□□□□ -0.24
TRIO-206ENST00000504606 ALX1Q15699 326 aa13.54□□□□□ -0.24
TRIO-206ENST00000504606 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
TRIO-206ENST00000504606 GPC2Q8N158 579 aa13.54□□□□□ -0.24
TRIO-206ENST00000504606 TGFBRAP1Q8WUH2 860 aa13.54□□□□□ -0.24
TRIO-206ENST00000504606 DPF2Q92785 391 aa13.54□□□□□ -0.24
TRIO-206ENST00000504606 DDRGK1Q96HY6 314 aa13.54□□□□□ -0.24
TRIO-206ENST00000504606 USP40Q9NVE5 1235 aa13.54□□□□□ -0.24
TRIO-206ENST00000504606 SHTN1A0MZ66 631 aa13.53□□□□□ -0.24
TRIO-206ENST00000504606 ZKSCAN1P17029 563 aaPredicted RBP13.53□□□□□ -0.24
TRIO-206ENST00000504606 IMMTQ16891 758 aaKnown RBP13.53□□□□□ -0.24
TRIO-206ENST00000504606 MICALL2Q8IY33 904 aa13.53□□□□□ -0.24
TRIO-206ENST00000504606 PRMT6Q96LA8 375 aaPredicted RBP13.53□□□□□ -0.24
TRIO-206ENST00000504606 DCP1AQ9NPI6 582 aaPredicted RBP13.53□□□□□ -0.24
TRIO-206ENST00000504606 ATP8A2Q9NTI2 1148 aa13.53□□□□□ -0.24
TRIO-206ENST00000504606 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
TRIO-206ENST00000504606 SNX14Q9Y5W7 946 aa13.53□□□□□ -0.24
TRIO-206ENST00000504606 ZMYM6O95789 1325 aa13.53□□□□□ -0.24
TRIO-206ENST00000504606 NAV1Q8NEY1 1877 aa13.53□□□□□ -0.24
TRIO-206ENST00000504606 CDK5RAP2Q96SN8 1893 aa13.53□□□□□ -0.24
TRIO-206ENST00000504606 DCAF8L1A6NGE4 600 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 ZNF213O14771 459 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 DDNO94850 711 aaPredicted RBP13.52□□□□□ -0.25
TRIO-206ENST00000504606 CYP21A2P08686 494 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 MMP14P50281 582 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 ZNF280AP59817 542 aaPredicted RBP13.52□□□□□ -0.25
TRIO-206ENST00000504606 ANAPC15P60006 121 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 HAND2P61296 217 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 GIMAP6Q6P9H5 292 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 MAPKAPK5Q8IW41 473 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 RASEFQ8IZ41 740 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 KCNB2Q92953 911 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 TDRD3Q9H7E2 651 aaKnown RBP13.52□□□□□ -0.25
TRIO-206ENST00000504606 MYOZ2Q9NPC6 264 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 RBM19Q9Y4C8 960 aaKnown RBP13.52□□□□□ -0.25
TRIO-206ENST00000504606 ECM29Q5VYK3 1845 aa13.52□□□□□ -0.25
TRIO-206ENST00000504606 BAZ2AQ9UIF9 1905 aaKnown RBP13.52□□□□□ -0.25
TRIO-206ENST00000504606 LAMA4Q16363 1823 aa13.51□□□□□ -0.25
TRIO-206ENST00000504606 FOCADQ5VW36 1801 aa13.51□□□□□ -0.25
TRIO-206ENST00000504606 FLT1P17948 1338 aa13.51□□□□□ -0.25
TRIO-206ENST00000504606 ZC3H4Q9UPT8 1303 aaKnown RBP13.51□□□□□ -0.25
TRIO-206ENST00000504606 H7C1D1 291 aa13.51□□□□□ -0.25
TRIO-206ENST00000504606 PICALMQ13492 652 aa13.51□□□□□ -0.25
TRIO-206ENST00000504606 RBM26Q5T8P6 1007 aaKnown RBP13.51□□□□□ -0.25
TRIO-206ENST00000504606 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
TRIO-206ENST00000504606 MTMR14Q8NCE2 650 aa13.51□□□□□ -0.25
TRIO-206ENST00000504606 KIF2CQ99661 725 aa13.51□□□□□ -0.25
TRIO-206ENST00000504606 MCM9Q9NXL9 1143 aa13.51□□□□□ -0.25
TRIO-206ENST00000504606 MINDY4BA8MYZ0 360 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 USP17L12C9JPN9 530 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 USP17L21D6R901 530 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 WDHD1O75717 1129 aaPredicted RBP13.5□□□□□ -0.25
TRIO-206ENST00000504606 CACNB3P54284 484 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 PPARAQ07869 468 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 AMOTL1Q8IY63 956 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 GPRC5DQ9NZD1 345 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 TMOD2Q9NZR1 351 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 ARPP21Q9UBL0 812 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms