RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 NRDE2Q9H7Z3 1164 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 PAPOLBQ9NRJ5 636 aaKnown RBP7.02□□□□□ -1.29
CLCN3-204ENST00000504131 RGL1Q9NZL6 768 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 VPS18Q9P253 973 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 ATP6V1G1O75348 118 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 ATP2B2Q01814 1243 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 AP1M1Q9BXS5 423 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 EIF2AQ9BY44 585 aaKnown RBP7.02□□□□□ -1.29
CLCN3-204ENST00000504131 CCDC113Q9H0I3 377 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 RPAP3Q9H6T3 665 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-204ENST00000504131 MCM8Q9UJA3 840 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 AFG3L2Q9Y4W6 797 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 CAPN7Q9Y6W3 813 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 CUX1P39880 1505 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 AP3B1O00203 1094 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 PROSER2Q86WR7 435 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-204ENST00000504131 HAUS1Q96CS2 278 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 ATPIF1Q9UII2 106 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 MLH1P40692 756 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 RASA3Q14644 834 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 DNAJC14Q6Y2X3 702 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-204ENST00000504131 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 RCAN3Q9UKA8 241 aa7.02□□□□□ -1.29
CLCN3-204ENST00000504131 FMN1Q68DA7 1419 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 STAM2O75886 525 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 PCK1P35558 622 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 ALDH1L2Q3SY69 923 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 ZC3H12AQ5D1E8 599 aaKnown RBP7.01□□□□□ -1.29
CLCN3-204ENST00000504131 MCTP1Q6DN14 999 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 THOC7Q6I9Y2 204 aaKnown RBP7.01□□□□□ -1.29
CLCN3-204ENST00000504131 GSDMAQ96QA5 445 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 TBK1Q9UHD2 729 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 MAFFQ9ULX9 164 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 CEP131Q9UPN4 1083 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 VPS37CA5D8V6 355 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-204ENST00000504131 MTRF1O75570 445 aaKnown RBP7.01□□□□□ -1.29
CLCN3-204ENST00000504131 APOEP02649 317 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 OLR1P78380 273 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 RELL1Q8IUW5 271 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 ZNF483Q8TF39 744 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-204ENST00000504131 OPTNQ96CV9 577 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 DHRS1Q96LJ7 313 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 SH3GL2Q99962 352 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 FAM129AQ9BZQ8 928 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 PHACTR1Q9C0D0 580 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 BZW2Q9Y6E2 419 aaKnown RBP7.01□□□□□ -1.29
CLCN3-204ENST00000504131 UNCXA6NJT0 531 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 ATF3P18847 181 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 PIP4K2BP78356 416 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 PDE3BQ13370 1112 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 SNCBQ16143 134 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 C3orf20Q8ND61 904 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 CAPN10Q9HC96 672 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 MUSKO15146 869 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 TADA3O75528 432 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 APOA4P06727 396 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 PLIN5Q00G26 463 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 SPECC1LQ69YQ0 1117 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 CCDC25Q86WR0 208 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 ZNF653Q96CK0 615 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 GBP5Q96PP8 586 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 OSBPL9Q96SU4 736 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 ZBED9Q6R2W3 1325 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-204ENST00000504131 IQCA1LA6NCM1 817 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 GRXCR2A6NFK2 248 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 TIMM44O43615 452 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 CLTAP09496 248 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 SPDYE1Q8NFV5 336 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-204ENST00000504131 SNRNP27Q8WVK2 155 aaKnown RBP7.01□□□□□ -1.29
CLCN3-204ENST00000504131 HPS3Q969F9 1004 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 MIEF2Q96C03 454 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 SPZ1Q9BXG8 430 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 TSGA10Q9BZW7 698 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 CAPN11Q9UMQ6 739 aa7.01□□□□□ -1.29
CLCN3-204ENST00000504131 A6NJR5 290 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 SPDYE16A6NNV3 312 aaPredicted RBP7□□□□□ -1.29
CLCN3-204ENST00000504131 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7□□□□□ -1.29
CLCN3-204ENST00000504131 CETN3O15182 167 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 KRT75O95678 551 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 GUCY2FP51841 1108 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 PPP2R5BQ15173 497 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 TAF11Q15544 211 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 STK32CQ86UX6 486 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 CDCA7Q9BWT1 371 aaPredicted RBP7□□□□□ -1.29
CLCN3-204ENST00000504131 ATP6V1DQ9Y5K8 247 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 EID1Q9Y6B2 187 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 EIF3CLB5ME19 914 aaKnown RBP7□□□□□ -1.29
CLCN3-204ENST00000504131 SERPINI2O75830 405 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 CHMP4BP1P59074 171 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 MPP3Q13368 585 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 ASIC2Q16515 512 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 DDB1Q16531 1140 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 ODR4Q5SWX8 454 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 C1QTNF12Q5T7M4 302 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 STX12Q86Y82 276 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 ELOA2Q8IYF1 753 aaPredicted RBP7□□□□□ -1.29
CLCN3-204ENST00000504131 C16orf45Q96MC5 204 aaPredicted RBP7□□□□□ -1.29
CLCN3-204ENST00000504131 EIF3CQ99613 913 aaKnown RBP7□□□□□ -1.29
CLCN3-204ENST00000504131 TMED10P49755 219 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms