RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 LAMB1P07942 1786 aa25.36■■□□□ 1.65
COL9A2-211ENST00000496215 TTC39AQ5SRH9 613 aa25.35■■□□□ 1.65
COL9A2-211ENST00000496215 PI16Q6UXB8 463 aa25.35■■□□□ 1.65
COL9A2-211ENST00000496215 CLMNQ96JQ2 1002 aa25.35■■□□□ 1.65
COL9A2-211ENST00000496215 RPAP1Q9BWH6 1393 aaPredicted RBP25.34■■□□□ 1.65
COL9A2-211ENST00000496215 MCAMP43121 646 aa25.34■■□□□ 1.65
COL9A2-211ENST00000496215 CCDC158Q5M9N0 1113 aa25.34■■□□□ 1.65
COL9A2-211ENST00000496215 USP2O75604 605 aaPredicted RBP25.33■■□□□ 1.65
COL9A2-211ENST00000496215 MKRN3Q13064 507 aaKnown RBP25.33■■□□□ 1.65
COL9A2-211ENST00000496215 FKBP1CQ5VVH2 108 aa25.33■■□□□ 1.65
COL9A2-211ENST00000496215 SLF2Q8IX21 1173 aa25.33■■□□□ 1.65
COL9A2-211ENST00000496215 CASP8AP2Q9UKL3 1982 aa25.33■■□□□ 1.64
COL9A2-211ENST00000496215 CA12O43570 354 aa25.32■■□□□ 1.64
COL9A2-211ENST00000496215 ERICH6Q7L0X2 663 aa25.32■■□□□ 1.64
COL9A2-211ENST00000496215 FAM83AQ86UY5 434 aa25.32■■□□□ 1.64
COL9A2-211ENST00000496215 RNF186Q9NXI6 227 aa25.32■■□□□ 1.64
COL9A2-211ENST00000496215 TLR7Q9NYK1 1049 aaKnown RBP25.32■■□□□ 1.64
COL9A2-211ENST00000496215 DBNLQ9UJU6 430 aaKnown RBP25.32■■□□□ 1.64
COL9A2-211ENST00000496215 GAKO14976 1311 aa25.32■■□□□ 1.64
COL9A2-211ENST00000496215 DOCK2Q92608 1830 aa25.31■■□□□ 1.64
COL9A2-211ENST00000496215 IREB2P48200 963 aaKnown RBP25.31■■□□□ 1.64
COL9A2-211ENST00000496215 SIRT2Q8IXJ6 389 aa25.31■■□□□ 1.64
COL9A2-211ENST00000496215 ZNF384Q8TF68 577 aa25.31■■□□□ 1.64
COL9A2-211ENST00000496215 CDC42EP5Q6NZY7 148 aa25.3■■□□□ 1.64
COL9A2-211ENST00000496215 EAF2Q96CJ1 260 aaPredicted RBP25.3■■□□□ 1.64
COL9A2-211ENST00000496215 MROH7-TTC4A0A0A0MT08 1334 aa25.3■■□□□ 1.64
COL9A2-211ENST00000496215 RRP1P56182 461 aaKnown RBP25.29■■□□□ 1.64
COL9A2-211ENST00000496215 MECOMQ03112 1051 aa25.29■■□□□ 1.64
COL9A2-211ENST00000496215 SPRYD7Q5W111 196 aa25.29■■□□□ 1.64
COL9A2-211ENST00000496215 AACSQ86V21 672 aa25.29■■□□□ 1.64
COL9A2-211ENST00000496215 RHPN1Q8TCX5 695 aa25.29■■□□□ 1.64
COL9A2-211ENST00000496215 ZNF512BQ96KM6 892 aaPredicted RBP25.29■■□□□ 1.64
COL9A2-211ENST00000496215 CCDC8Q9H0W5 538 aaPredicted RBP25.29■■□□□ 1.64
COL9A2-211ENST00000496215 UNCXA6NJT0 531 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 TRPA1O75762 1119 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 GJA5P36382 358 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 GSTO1P78417 241 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 TBC1D9Q6ZT07 1266 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 REM2Q8IYK8 340 aaPredicted RBP25.28■■□□□ 1.64
COL9A2-211ENST00000496215 HOOK2Q96ED9 719 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 KIF1BPQ96EK5 621 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 SNRKQ9NRH2 765 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 USP40Q9NVE5 1235 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 SAGE1Q9NXZ1 904 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 RAI14Q9P0K7 980 aa25.28■■□□□ 1.64
COL9A2-211ENST00000496215 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.28■■□□□ 1.64
COL9A2-211ENST00000496215 APBB1O00213 710 aa25.27■■□□□ 1.64
COL9A2-211ENST00000496215 NFIAQ12857 509 aa25.27■■□□□ 1.64
COL9A2-211ENST00000496215 IL1RAPL2Q9NP60 686 aa25.27■■□□□ 1.64
COL9A2-211ENST00000496215 LRP2BPQ9P2M1 347 aa25.27■■□□□ 1.64
COL9A2-211ENST00000496215 RFX7Q2KHR2 1363 aa25.27■■□□□ 1.64
COL9A2-211ENST00000496215 BTDP43251 543 aa25.26■■□□□ 1.63
COL9A2-211ENST00000496215 ANKRD13AQ8IZ07 590 aa25.26■■□□□ 1.63
COL9A2-211ENST00000496215 FAM151AQ8WW52 585 aa25.26■■□□□ 1.63
COL9A2-211ENST00000496215 FAM163AQ96GL9 167 aaPredicted RBP25.26■■□□□ 1.63
COL9A2-211ENST00000496215 WNK4Q96J92 1243 aa25.26■■□□□ 1.63
COL9A2-211ENST00000496215 MYO5AQ9Y4I1 1855 aaKnown RBP25.26■■□□□ 1.63
COL9A2-211ENST00000496215 TM4SF4P48230 202 aa25.25■■□□□ 1.63
COL9A2-211ENST00000496215 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.25■■□□□ 1.63
COL9A2-211ENST00000496215 CLASRPQ8N2M8 674 aaKnown RBP25.25■■□□□ 1.63
COL9A2-211ENST00000496215 NSUN4Q96CB9 384 aaKnown RBP25.25■■□□□ 1.63
COL9A2-211ENST00000496215 SLC10A4Q96EP9 437 aa25.25■■□□□ 1.63
COL9A2-211ENST00000496215 FAM198AQ9UFP1 575 aa25.25■■□□□ 1.63
COL9A2-211ENST00000496215 AK9Q5TCS8 1911 aa25.24■■□□□ 1.63
COL9A2-211ENST00000496215 RAB11FIP3O75154 756 aa25.24■■□□□ 1.63
COL9A2-211ENST00000496215 TCP10Q12799 353 aa25.24■■□□□ 1.63
COL9A2-211ENST00000496215 CAPN15O75808 1086 aa25.23■■□□□ 1.63
COL9A2-211ENST00000496215 LDHCP07864 332 aa25.23■■□□□ 1.63
COL9A2-211ENST00000496215 ZBTB48P10074 688 aaPredicted RBP25.23■■□□□ 1.63
COL9A2-211ENST00000496215 ZAP70P43403 619 aa25.23■■□□□ 1.63
COL9A2-211ENST00000496215 SREBF2Q12772 1141 aa25.23■■□□□ 1.63
COL9A2-211ENST00000496215 DCAF15Q66K64 600 aa25.23■■□□□ 1.63
COL9A2-211ENST00000496215 ZFPM1Q8IX07 1006 aa25.23■■□□□ 1.63
COL9A2-211ENST00000496215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.23■■□□□ 1.63
COL9A2-211ENST00000496215 CYP2E1P05181 493 aaPredicted RBP25.22■■□□□ 1.63
COL9A2-211ENST00000496215 CNKSR2Q8WXI2 1034 aa25.22■■□□□ 1.63
COL9A2-211ENST00000496215 IDI2Q9BXS1 227 aa25.22■■□□□ 1.63
COL9A2-211ENST00000496215 ELP3Q9H9T3 547 aa25.22■■□□□ 1.63
COL9A2-211ENST00000496215 GPR75-ASB3A0A0A6YYF3 556 aa25.21■■□□□ 1.63
COL9A2-211ENST00000496215 RGS3P49796 1198 aa25.21■■□□□ 1.63
COL9A2-211ENST00000496215 VGLL4Q14135 290 aa25.21■■□□□ 1.63
COL9A2-211ENST00000496215 CSADQ9Y600 493 aa25.21■■□□□ 1.63
COL9A2-211ENST00000496215 ENTPD3O75355 529 aa25.2■■□□□ 1.62
COL9A2-211ENST00000496215 IFIT2P09913 472 aaKnown RBP25.2■■□□□ 1.62
COL9A2-211ENST00000496215 NAA16Q6N069 864 aaPredicted RBP25.2■■□□□ 1.62
COL9A2-211ENST00000496215 WRNIP1Q96S55 665 aa25.2■■□□□ 1.62
COL9A2-211ENST00000496215 NOL10Q9BSC4 688 aaKnown RBP25.2■■□□□ 1.62
COL9A2-211ENST00000496215 ATRNL1Q5VV63 1379 aa25.19■■□□□ 1.62
COL9A2-211ENST00000496215 IGSF3O75054 1194 aa25.19■■□□□ 1.62
COL9A2-211ENST00000496215 PICALMQ13492 652 aa25.19■■□□□ 1.62
COL9A2-211ENST00000496215 BCL11AQ9H165 835 aa25.19■■□□□ 1.62
COL9A2-211ENST00000496215 R3HDMLQ9H3Y0 253 aa25.19■■□□□ 1.62
COL9A2-211ENST00000496215 DDX4Q9NQI0 724 aaKnown RBP25.19■■□□□ 1.62
COL9A2-211ENST00000496215 PIH1D3Q9NQM4 214 aaKnown RBP25.19■■□□□ 1.62
COL9A2-211ENST00000496215 FOCADQ5VW36 1801 aa25.19■■□□□ 1.62
COL9A2-211ENST00000496215 CDK5RAP2Q96SN8 1893 aa25.18■■□□□ 1.62
COL9A2-211ENST00000496215 MANSC4A6NHS7 340 aaPredicted RBP25.18■■□□□ 1.62
COL9A2-211ENST00000496215 IGF2BP3O00425 579 aaKnown RBP eCLIP25.18■■□□□ 1.62
COL9A2-211ENST00000496215 WDHD1O75717 1129 aaPredicted RBP25.18■■□□□ 1.62
COL9A2-211ENST00000496215 TBC1D8O95759 1140 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms