RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ZNF532Q9HCE3 1301 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 COL5A2P05997 1499 aaPredicted RBP15.08■□□□□ 0
PTPN7-217ENST00000495688 C4AP0C0L4 1744 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 C4BP0C0L5 1744 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 GSDMDP57764 484 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 PNOCQ13519 176 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 SYCP1Q15431 976 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.08■□□□□ 06e-7■■■■□ 19.6
PTPN7-217ENST00000495688 FBXO3Q9UK99 471 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 ZMYM6O95789 1325 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 DDX60Q8IY21 1712 aaKnown RBP15.07■□□□□ 0
PTPN7-217ENST00000495688 SH2B2O14492 632 aaPredicted RBP15.07■□□□□ 0
PTPN7-217ENST00000495688 SYKP43405 635 aa15.07■□□□□ 0
PTPN7-217ENST00000495688 PAPPAQ13219 1627 aa15.07■□□□□ 0
PTPN7-217ENST00000495688 PIGBQ92521 554 aa15.07■□□□□ 0
PTPN7-217ENST00000495688 BPIFA3Q9BQP9 254 aa15.07■□□□□ 0
PTPN7-217ENST00000495688 RANBP6O60518 1105 aaKnown RBP15.07■□□□□ 0
PTPN7-217ENST00000495688 NLRP10Q86W26 655 aa15.07■□□□□ 0
PTPN7-217ENST00000495688 DPF2Q92785 391 aa15.07■□□□□ 0
PTPN7-217ENST00000495688 PLA2G12BQ9BX93 195 aa15.07■□□□□ 0
PTPN7-217ENST00000495688 DCCP43146 1447 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 PTPAQ15257 358 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 SPECC1Q5M775 1068 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 VGLL2Q8N8G2 317 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 PPP1R13BQ96KQ4 1090 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 SFPQP23246 707 aaKnown RBP eCLIP15.06■□□□□ 0
PTPN7-217ENST00000495688 FANCCQ00597 558 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 GOLGA8FQ08AF8 430 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 GOLGA8DPQ0D2H9 430 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 GNL2Q13823 731 aaKnown RBP15.06■□□□□ 0
PTPN7-217ENST00000495688 ELF2Q15723 593 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 CCDC102BQ68D86 513 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 GIGYF2Q6Y7W6 1299 aaKnown RBP15.06■□□□□ 0
PTPN7-217ENST00000495688 KIF18AQ8NI77 898 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 IMPACTQ9P2X3 320 aa15.06■□□□□ 0
PTPN7-217ENST00000495688 PDE6AP16499 860 aa15.05■□□□□ 0
PTPN7-217ENST00000495688 NTRK3Q16288 839 aa15.05■□□□□ 0
PTPN7-217ENST00000495688 KMT5BQ4FZB7 885 aa15.05■□□□□ 0
PTPN7-217ENST00000495688 HSP90AA4PQ58FG1 418 aa15.05■□□□□ 0
PTPN7-217ENST00000495688 STK11IPQ8N1F8 1099 aa15.05■□□□□ 0
PTPN7-217ENST00000495688 LRRN4CLQ8ND94 238 aa15.05■□□□□ 0
PTPN7-217ENST00000495688 IGDCC4Q8TDY8 1250 aa15.05■□□□□ 0
PTPN7-217ENST00000495688 CARD10Q9BWT7 1032 aa15.05■□□□□ 0
PTPN7-217ENST00000495688 FAM217BQ9NTX9 383 aaPredicted RBP15.05■□□□□ 0
PTPN7-217ENST00000495688 TACC3Q9Y6A5 838 aa15.05■□□□□ 0
PTPN7-217ENST00000495688 SHANK3Q9BYB0 1731 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 MAP3K15Q6ZN16 1313 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 CTSWP56202 376 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 CTDSPL2Q05D32 466 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 SYT10Q6XYQ8 523 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 NFXL1Q6ZNB6 911 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 FOXP4Q8IVH2 680 aaPredicted RBP15.05■□□□□ -0
PTPN7-217ENST00000495688 MAP3K14Q99558 947 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 PODXL2Q9NZ53 605 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 CGNQ9P2M7 1197 aaKnown RBP15.05■□□□□ -0
PTPN7-217ENST00000495688 HPSEQ9Y251 543 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 TOGARAM1Q9Y4F4 1720 aa15.05■□□□□ -0
PTPN7-217ENST00000495688 UBN2Q6ZU65 1347 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 WDR19Q8NEZ3 1342 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 ANKRD18BA2A2Z9 1011 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 IRS4O14654 1257 aaPredicted RBP15.04■□□□□ -0
PTPN7-217ENST00000495688 FOXN1O15353 648 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 ZBTB43O43298 467 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 PDE8BO95263 885 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 LONRF3Q496Y0 759 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 FEZ1Q99689 392 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 EVA1CP58658 441 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 CCDC82Q8N4S0 544 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 LY9Q9HBG7 655 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 EPB41L4AQ9HCS5 686 aaPredicted RBP15.04■□□□□ -0
PTPN7-217ENST00000495688 TRMT112Q9UI30 125 aaKnown RBP15.04■□□□□ -0
PTPN7-217ENST00000495688 TUBE1Q9UJT0 475 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 ABCC12Q96J65 1359 aa15.04■□□□□ -0
PTPN7-217ENST00000495688 TCRBV5S4A2TA0A5A2 114 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 GUCY1A2P33402 732 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 IARSP41252 1262 aaKnown RBP15.03■□□□□ -0
PTPN7-217ENST00000495688 TMEM67Q5HYA8 995 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 METTL16Q86W50 562 aaKnown RBP15.03■□□□□ -0
PTPN7-217ENST00000495688 CMTR1Q8N1G2 835 aaKnown RBP15.03■□□□□ -0
PTPN7-217ENST00000495688 CCDC150Q8NCX0 1101 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 AIDAQ96BJ3 306 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 STRBPQ96SI9 672 aaKnown RBP15.03■□□□□ -0
PTPN7-217ENST00000495688 OGFRQ9NZT2 677 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 ZSWIM5Q9P217 1185 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 GOLGA8AA7E2F4 631 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 TMEM232C9JQI7 657 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 STARD3NLO95772 234 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 HSPA2P54652 639 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 UBE3CQ15386 1083 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 FBXO38Q6PIJ6 1188 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 ZKSCAN3Q9BRR0 538 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 SLC26A6Q9BXS9 759 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 KCND1Q9NSA2 647 aa15.03■□□□□ -0
PTPN7-217ENST00000495688 DDX41Q9UJV9 622 aaKnown RBP15.03■□□□□ -0
PTPN7-217ENST00000495688 TPM4P67936 248 aa15.02■□□□□ -0
PTPN7-217ENST00000495688 GRIN1Q05586 938 aa15.02■□□□□ -0
PTPN7-217ENST00000495688 UTP14CQ5TAP6 766 aaKnown RBP15.02■□□□□ -0
PTPN7-217ENST00000495688 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.02■□□□□ -0
PTPN7-217ENST00000495688 TBC1D2BQ9UPU7 963 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms