RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZKSCAN4Q969J2 545 aaPredicted RBP28.92■■■□□ 2.22
COL27A1-208ENST00000494780 ZNF341Q9BYN7 854 aa28.92■■■□□ 2.22
COL27A1-208ENST00000494780 COPRSQ9NQ92 184 aa28.92■■■□□ 2.22
COL27A1-208ENST00000494780 DENND2AQ9ULE3 1009 aa28.92■■■□□ 2.22
COL27A1-208ENST00000494780 SALL1Q9NSC2 1324 aa28.92■■■□□ 2.22
COL27A1-208ENST00000494780 CCER2I3L3R5 266 aa28.91■■■□□ 2.22
COL27A1-208ENST00000494780 ZBTB22O15209 634 aa28.91■■■□□ 2.22
COL27A1-208ENST00000494780 LDHBP07195 334 aaKnown RBP28.91■■■□□ 2.22
COL27A1-208ENST00000494780 PRDX5P30044 214 aa28.91■■■□□ 2.22
COL27A1-208ENST00000494780 DIXDC1Q155Q3 683 aa28.91■■■□□ 2.22
COL27A1-208ENST00000494780 PRPF38BQ5VTL8 546 aaKnown RBP28.91■■■□□ 2.22
COL27A1-208ENST00000494780 WDHD1O75717 1129 aaPredicted RBP28.9■■■□□ 2.22
COL27A1-208ENST00000494780 RARSP54136 660 aaKnown RBP28.9■■■□□ 2.22
COL27A1-208ENST00000494780 PPIL2Q13356 520 aa28.9■■■□□ 2.22
COL27A1-208ENST00000494780 SNAPC2Q13487 334 aa28.9■■■□□ 2.22
COL27A1-208ENST00000494780 ARHGEF6Q15052 776 aa28.9■■■□□ 2.22
COL27A1-208ENST00000494780 CDC42EP5Q6NZY7 148 aa28.9■■■□□ 2.22
COL27A1-208ENST00000494780 MEIS3Q99687 375 aa28.9■■■□□ 2.22
COL27A1-208ENST00000494780 ZCCHC17Q9NP64 241 aaKnown RBP28.9■■■□□ 2.22
COL27A1-208ENST00000494780 PA2G4Q9UQ80 394 aaKnown RBP28.9■■■□□ 2.22
COL27A1-208ENST00000494780 ARHGAP45Q92619 1136 aa28.89■■■□□ 2.22
COL27A1-208ENST00000494780 IRF6O14896 467 aa28.88■■■□□ 2.21
COL27A1-208ENST00000494780 PHKA1P46020 1223 aa28.88■■■□□ 2.21
COL27A1-208ENST00000494780 CAP1Q01518 475 aa28.88■■■□□ 2.21
COL27A1-208ENST00000494780 PPATQ06203 517 aa28.88■■■□□ 2.21
COL27A1-208ENST00000494780 MIGA2Q7L4E1 593 aa28.88■■■□□ 2.21
COL27A1-208ENST00000494780 ARMC5Q96C12 935 aa28.88■■■□□ 2.21
COL27A1-208ENST00000494780 BTBD19C9JJ37 291 aa28.86■■■□□ 2.21
COL27A1-208ENST00000494780 GNAI3P08754 354 aa28.86■■■□□ 2.21
COL27A1-208ENST00000494780 TCP10Q12799 353 aa28.86■■■□□ 2.21
COL27A1-208ENST00000494780 ZGPATQ8N5A5 531 aaKnown RBP28.86■■■□□ 2.21
COL27A1-208ENST00000494780 USP40Q9NVE5 1235 aa28.86■■■□□ 2.21
COL27A1-208ENST00000494780 ZNF112Q9UJU3 913 aa28.86■■■□□ 2.21
COL27A1-208ENST00000494780 TLR2O60603 784 aa28.85■■■□□ 2.21
COL27A1-208ENST00000494780 INPP5BP32019 993 aa28.85■■■□□ 2.21
COL27A1-208ENST00000494780 NFIAQ12857 509 aa28.85■■■□□ 2.21
COL27A1-208ENST00000494780 CCDC102BQ68D86 513 aa28.85■■■□□ 2.21
COL27A1-208ENST00000494780 ADORA1P30542 326 aa28.84■■■□□ 2.21
COL27A1-208ENST00000494780 FAM198AQ9UFP1 575 aa28.84■■■□□ 2.21
COL27A1-208ENST00000494780 POTEFA5A3E0 1075 aa28.83■■■□□ 2.21
COL27A1-208ENST00000494780 PDS5AQ29RF7 1337 aaKnown RBP28.83■■■□□ 2.21
COL27A1-208ENST00000494780 MTX1Q13505 466 aa28.82■■■□□ 2.2
COL27A1-208ENST00000494780 AKAP2Q9Y2D5 859 aa28.82■■■□□ 2.2
COL27A1-208ENST00000494780 RBBP6Q7Z6E9 1792 aaKnown RBP28.81■■■□□ 2.2
COL27A1-208ENST00000494780 SRGAP3O43295 1099 aa28.81■■■□□ 2.2
COL27A1-208ENST00000494780 TIMM10P62072 90 aa28.81■■■□□ 2.2
COL27A1-208ENST00000494780 NOL9Q5SY16 702 aaKnown RBP28.81■■■□□ 2.2
COL27A1-208ENST00000494780 GAKO14976 1311 aa28.8■■■□□ 2.2
COL27A1-208ENST00000494780 RASGRF1Q13972 1273 aa28.8■■■□□ 2.2
COL27A1-208ENST00000494780 KIF22Q14807 665 aa28.8■■■□□ 2.2
COL27A1-208ENST00000494780 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.8■■■□□ 2.2
COL27A1-208ENST00000494780 IDI2Q9BXS1 227 aa28.8■■■□□ 2.2
COL27A1-208ENST00000494780 KCNH4Q9UQ05 1017 aa28.8■■■□□ 2.2
COL27A1-208ENST00000494780 AK9Q5TCS8 1911 aa28.79■■■□□ 2.2
COL27A1-208ENST00000494780 IPO8O15397 1037 aaKnown RBP28.79■■■□□ 2.2
COL27A1-208ENST00000494780 ANKRD23Q86SG2 305 aa28.79■■■□□ 2.2
COL27A1-208ENST00000494780 SLF2Q8IX21 1173 aa28.79■■■□□ 2.2
COL27A1-208ENST00000494780 PTCH2Q9Y6C5 1203 aa28.79■■■□□ 2.2
COL27A1-208ENST00000494780 HTTP42858 3142 aa28.79■■■□□ 2.2
COL27A1-208ENST00000494780 A0A1B0GUL7 405 aa28.78■■■□□ 2.2
COL27A1-208ENST00000494780 ENTPD3O75355 529 aa28.78■■■□□ 2.2
COL27A1-208ENST00000494780 LACTBP83111 547 aaPredicted RBP28.78■■■□□ 2.2
COL27A1-208ENST00000494780 TFCP2Q12800 502 aa28.78■■■□□ 2.2
COL27A1-208ENST00000494780 SPTY2D1Q68D10 685 aaPredicted RBP28.78■■■□□ 2.2
COL27A1-208ENST00000494780 NBPF11Q86T75 865 aa28.78■■■□□ 2.2
COL27A1-208ENST00000494780 DZIP1Q86YF9 867 aaKnown RBP28.78■■■□□ 2.2
COL27A1-208ENST00000494780 ZFPM1Q8IX07 1006 aa28.78■■■□□ 2.2
COL27A1-208ENST00000494780 XAGE2Q96GT9 111 aa28.78■■■□□ 2.2
COL27A1-208ENST00000494780 ZNF333Q96JL9 665 aa28.78■■■□□ 2.2
COL27A1-208ENST00000494780 ABCF2Q9UG63 623 aa28.78■■■□□ 2.2
COL27A1-208ENST00000494780 GNRH1P01148 92 aa28.77■■■□□ 2.2
COL27A1-208ENST00000494780 RGS3P49796 1198 aa28.77■■■□□ 2.2
COL27A1-208ENST00000494780 MVPQ14764 893 aaKnown RBP28.77■■■□□ 2.2
COL27A1-208ENST00000494780 SLC9C1Q4G0N8 1177 aa28.77■■■□□ 2.2
COL27A1-208ENST00000494780 FAM163AQ96GL9 167 aaPredicted RBP28.77■■■□□ 2.2
COL27A1-208ENST00000494780 TMEM106CQ9BVX2 250 aa28.77■■■□□ 2.2
COL27A1-208ENST00000494780 MYH2Q9UKX2 1941 aa28.77■■■□□ 2.2
COL27A1-208ENST00000494780 ATRNL1Q5VV63 1379 aa28.76■■■□□ 2.2
COL27A1-208ENST00000494780 C17orf99Q6UX52 265 aa28.76■■■□□ 2.19
COL27A1-208ENST00000494780 KIAA0100Q14667 2235 aaKnown RBP28.75■■■□□ 2.19
COL27A1-208ENST00000494780 RFX7Q2KHR2 1363 aa28.75■■■□□ 2.19
COL27A1-208ENST00000494780 TRIM27P14373 513 aa28.75■■■□□ 2.19
COL27A1-208ENST00000494780 ARHGAP39Q9C0H5 1083 aa28.75■■■□□ 2.19
COL27A1-208ENST00000494780 PDHXO00330 501 aa28.74■■■□□ 2.19
COL27A1-208ENST00000494780 CXCL11O14625 94 aa28.74■■■□□ 2.19
COL27A1-208ENST00000494780 PRMT2P55345 433 aa28.74■■■□□ 2.19
COL27A1-208ENST00000494780 ATF7IPQ6VMQ6 1270 aa28.74■■■□□ 2.19
COL27A1-208ENST00000494780 PHF20L1A8MW92 1017 aa28.73■■■□□ 2.19
COL27A1-208ENST00000494780 GNAI2P04899 355 aa28.73■■■□□ 2.19
COL27A1-208ENST00000494780 EN2P19622 333 aaPredicted RBP28.73■■■□□ 2.19
COL27A1-208ENST00000494780 MOGSQ13724 837 aa28.73■■■□□ 2.19
COL27A1-208ENST00000494780 DOCK2Q92608 1830 aa28.73■■■□□ 2.19
COL27A1-208ENST00000494780 MROH7-TTC4A0A0A0MT08 1334 aa28.72■■■□□ 2.19
COL27A1-208ENST00000494780 BTDP43251 543 aa28.72■■■□□ 2.19
COL27A1-208ENST00000494780 MAP3K10Q02779 954 aa28.72■■■□□ 2.19
COL27A1-208ENST00000494780 ERICH6Q7L0X2 663 aa28.72■■■□□ 2.19
COL27A1-208ENST00000494780 ZSCAN29Q8IWY8 852 aaPredicted RBP28.72■■■□□ 2.19
COL27A1-208ENST00000494780 NEUROD6Q96NK8 337 aa28.72■■■□□ 2.19
COL27A1-208ENST00000494780 CPA4Q9UI42 421 aa28.72■■■□□ 2.19
COL27A1-208ENST00000494780 ADGRA2Q96PE1 1338 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms