RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 PUM3Q15397 648 aaKnown RBP17.2■□□□□ 0.34
SAMM50-204ENST00000493161 DIXDC1Q155Q3 683 aa17.2■□□□□ 0.34
SAMM50-204ENST00000493161 C17orf99Q6UX52 265 aa17.2■□□□□ 0.34
SAMM50-204ENST00000493161 ZNF341Q9BYN7 854 aa17.2■□□□□ 0.34
SAMM50-204ENST00000493161 ZCCHC17Q9NP64 241 aaKnown RBP17.2■□□□□ 0.34
SAMM50-204ENST00000493161 ZNF521Q96K83 1311 aa17.2■□□□□ 0.34
SAMM50-204ENST00000493161 RPAP1Q9BWH6 1393 aaPredicted RBP17.19■□□□□ 0.34
SAMM50-204ENST00000493161 H0YGN5 161 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 PPATQ06203 517 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 TCP10Q12799 353 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 NFIAQ12857 509 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 MOGSQ13724 837 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 KIF22Q14807 665 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 DCAF15Q66K64 600 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 CDC42EP5Q6NZY7 148 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 TRIM47Q96LD4 638 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 SUGT1Q9Y2Z0 365 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 DAGLAQ9Y4D2 1042 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 MAST3O60307 1309 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 ADGRA2Q96PE1 1338 aa17.19■□□□□ 0.34
SAMM50-204ENST00000493161 PDHXO00330 501 aa17.18■□□□□ 0.34
SAMM50-204ENST00000493161 WDHD1O75717 1129 aaPredicted RBP17.18■□□□□ 0.34
SAMM50-204ENST00000493161 IFIT1P09914 478 aaKnown RBP17.18■□□□□ 0.34
SAMM50-204ENST00000493161 ZFPM1Q8IX07 1006 aa17.18■□□□□ 0.34
SAMM50-204ENST00000493161 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
SAMM50-204ENST00000493161 SHISA4Q96DD7 197 aa17.18■□□□□ 0.34
SAMM50-204ENST00000493161 HOOK2Q96ED9 719 aa17.18■□□□□ 0.34
SAMM50-204ENST00000493161 ZNF112Q9UJU3 913 aa17.18■□□□□ 0.34
SAMM50-204ENST00000493161 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
SAMM50-204ENST00000493161 EYA2O00167 538 aa17.17■□□□□ 0.34
SAMM50-204ENST00000493161 PRDX5P30044 214 aa17.17■□□□□ 0.34
SAMM50-204ENST00000493161 PSMC4P43686 418 aa17.17■□□□□ 0.34
SAMM50-204ENST00000493161 ATG9AQ7Z3C6 839 aa17.17■□□□□ 0.34
SAMM50-204ENST00000493161 ANKRD23Q86SG2 305 aa17.17■□□□□ 0.34
SAMM50-204ENST00000493161 SSH1Q8WYL5 1049 aa17.17■□□□□ 0.34
SAMM50-204ENST00000493161 FAM198AQ9UFP1 575 aa17.17■□□□□ 0.34
SAMM50-204ENST00000493161 KCNH4Q9UQ05 1017 aa17.17■□□□□ 0.34
SAMM50-204ENST00000493161 OSBPP22059 807 aa17.16■□□□□ 0.34
SAMM50-204ENST00000493161 WDR66Q8TBY9 1149 aa17.16■□□□□ 0.34
SAMM50-204ENST00000493161 LPIN2Q92539 896 aa17.16■□□□□ 0.34
SAMM50-204ENST00000493161 SRRDQ9UH36 339 aa17.16■□□□□ 0.34
SAMM50-204ENST00000493161 PTPRCP08575 1304 aa17.16■□□□□ 0.34
SAMM50-204ENST00000493161 GNRH1P01148 92 aa17.15■□□□□ 0.34
SAMM50-204ENST00000493161 SLC5A1P13866 664 aa17.15■□□□□ 0.34
SAMM50-204ENST00000493161 FMNL1O95466 1100 aaPredicted RBP17.14■□□□□ 0.33
SAMM50-204ENST00000493161 SLURP2P0DP57 97 aa17.14■□□□□ 0.33
SAMM50-204ENST00000493161 PRMT2P55345 433 aa17.14■□□□□ 0.33
SAMM50-204ENST00000493161 GPAT2Q6NUI2 795 aa17.14■□□□□ 0.33
SAMM50-204ENST00000493161 SIL1Q9H173 461 aa17.14■□□□□ 0.33
SAMM50-204ENST00000493161 USP40Q9NVE5 1235 aa17.14■□□□□ 0.33
SAMM50-204ENST00000493161 MYH13Q9UKX3 1938 aa17.13■□□□□ 0.33
SAMM50-204ENST00000493161 CYP2C8P10632 490 aa17.13■□□□□ 0.33
SAMM50-204ENST00000493161 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
SAMM50-204ENST00000493161 NOL9Q5SY16 702 aaKnown RBP17.13■□□□□ 0.33
SAMM50-204ENST00000493161 PHF20L1A8MW92 1017 aa17.12■□□□□ 0.33
SAMM50-204ENST00000493161 GRK4P32298 578 aa17.12■□□□□ 0.33
SAMM50-204ENST00000493161 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
SAMM50-204ENST00000493161 RAET1EQ8TD07 263 aa17.12■□□□□ 0.33
SAMM50-204ENST00000493161 MYPNQ86TC9 1320 aa17.12■□□□□ 0.33
SAMM50-204ENST00000493161 ATRNL1Q5VV63 1379 aa17.12■□□□□ 0.33
SAMM50-204ENST00000493161 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
SAMM50-204ENST00000493161 BCRP11274 1271 aa17.11■□□□□ 0.33
SAMM50-204ENST00000493161 CCL5P13501 91 aa17.11■□□□□ 0.33
SAMM50-204ENST00000493161 PHKA1P46020 1223 aa17.11■□□□□ 0.33
SAMM50-204ENST00000493161 PRKCZQ05513 592 aa17.11■□□□□ 0.33
SAMM50-204ENST00000493161 ATP2B3Q16720 1220 aa17.11■□□□□ 0.33
SAMM50-204ENST00000493161 SH3BP5LQ7L8J4 393 aa17.11■□□□□ 0.33
SAMM50-204ENST00000493161 UBE2Q1Q7Z7E8 422 aa17.11■□□□□ 0.33
SAMM50-204ENST00000493161 GABRQQ9UN88 632 aa17.11■□□□□ 0.33
SAMM50-204ENST00000493161 AK9Q5TCS8 1911 aa17.11■□□□□ 0.33
SAMM50-204ENST00000493161 HOXD10P28358 340 aa17.1■□□□□ 0.33
SAMM50-204ENST00000493161 ADORA1P30542 326 aa17.1■□□□□ 0.33
SAMM50-204ENST00000493161 RGS3P49796 1198 aa17.1■□□□□ 0.33
SAMM50-204ENST00000493161 DPF3Q92784 378 aa17.1■□□□□ 0.33
SAMM50-204ENST00000493161 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.1■□□□□ 0.33
SAMM50-204ENST00000493161 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
SAMM50-204ENST00000493161 CXCL11O14625 94 aa17.09■□□□□ 0.33
SAMM50-204ENST00000493161 GJA8P48165 433 aa17.09■□□□□ 0.33
SAMM50-204ENST00000493161 PARK7Q99497 189 aaKnown RBP17.09■□□□□ 0.33
SAMM50-204ENST00000493161 RNF208Q9H0X6 261 aa17.09■□□□□ 0.33
SAMM50-204ENST00000493161 CEP126Q9P2H0 1117 aa17.09■□□□□ 0.33
SAMM50-204ENST00000493161 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
SAMM50-204ENST00000493161 BIN2Q9UBW5 565 aaPredicted RBP17.09■□□□□ 0.33
SAMM50-204ENST00000493161 ZHX2Q9Y6X8 837 aa17.09■□□□□ 0.33
SAMM50-204ENST00000493161 SALL1Q9NSC2 1324 aa17.09■□□□□ 0.33
SAMM50-204ENST00000493161 CEP290O15078 2479 aa17.08■□□□□ 0.33
SAMM50-204ENST00000493161 CIAO1O76071 339 aa17.08■□□□□ 0.32
SAMM50-204ENST00000493161 GJB1P08034 283 aa17.08■□□□□ 0.32
SAMM50-204ENST00000493161 PTPRAP18433 802 aa17.08■□□□□ 0.32
SAMM50-204ENST00000493161 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
SAMM50-204ENST00000493161 SCYL3Q8IZE3 742 aa17.08■□□□□ 0.32
SAMM50-204ENST00000493161 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.32
SAMM50-204ENST00000493161 UNC93B1Q9H1C4 597 aa17.08■□□□□ 0.32
SAMM50-204ENST00000493161 DDX4Q9NQI0 724 aaKnown RBP17.08■□□□□ 0.32
SAMM50-204ENST00000493161 GNL3LQ9NVN8 582 aaKnown RBP17.08■□□□□ 0.32
SAMM50-204ENST00000493161 SZT2Q5T011 3432 aa17.08■□□□□ 0.32
SAMM50-204ENST00000493161 RFX7Q2KHR2 1363 aa17.07■□□□□ 0.32
SAMM50-204ENST00000493161 A0A0G2JLL6 359 aaPredicted RBP17.07■□□□□ 0.32
SAMM50-204ENST00000493161 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
SAMM50-204ENST00000493161 DDTLA6NHG4 134 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms