RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 UQCRFS1P1P0C7P4 283 aa18.56■□□□□ 0.56
USP39-217ENST00000491659 SREBF2Q12772 1141 aa18.56■□□□□ 0.56
USP39-217ENST00000491659 ANKRD13AQ8IZ07 590 aa18.56■□□□□ 0.56
USP39-217ENST00000491659 SPATA5Q8NB90 893 aa18.56■□□□□ 0.56
USP39-217ENST00000491659 HOOK2Q96ED9 719 aa18.56■□□□□ 0.56
USP39-217ENST00000491659 RNF186Q9NXI6 227 aa18.56■□□□□ 0.56
USP39-217ENST00000491659 DOCK2Q92608 1830 aa18.56■□□□□ 0.56
USP39-217ENST00000491659 USP2O75604 605 aaPredicted RBP18.55■□□□□ 0.56
USP39-217ENST00000491659 CCDC158Q5M9N0 1113 aa18.55■□□□□ 0.56
USP39-217ENST00000491659 TTC39AQ5SRH9 613 aa18.55■□□□□ 0.56
USP39-217ENST00000491659 SPRYD7Q5W111 196 aa18.55■□□□□ 0.56
USP39-217ENST00000491659 ERICH6Q7L0X2 663 aa18.55■□□□□ 0.56
USP39-217ENST00000491659 CDAN1Q8IWY9 1227 aa18.55■□□□□ 0.56
USP39-217ENST00000491659 CLMNQ96JQ2 1002 aa18.55■□□□□ 0.56
USP39-217ENST00000491659 HMG20BQ9P0W2 317 aa18.55■□□□□ 0.56
USP39-217ENST00000491659 CASP8AP2Q9UKL3 1982 aa18.55■□□□□ 0.56
USP39-217ENST00000491659 TRPA1O75762 1119 aa18.54■□□□□ 0.56
USP39-217ENST00000491659 ZBTB48P10074 688 aaPredicted RBP18.54■□□□□ 0.56
USP39-217ENST00000491659 CDC42EP5Q6NZY7 148 aa18.54■□□□□ 0.56
USP39-217ENST00000491659 ERC1Q8IUD2 1116 aa18.54■□□□□ 0.56
USP39-217ENST00000491659 WNK4Q96J92 1243 aa18.54■□□□□ 0.56
USP39-217ENST00000491659 GAKO14976 1311 aa18.53■□□□□ 0.56
USP39-217ENST00000491659 HMMRO75330 724 aa18.53■□□□□ 0.56
USP39-217ENST00000491659 MCAMP43121 646 aa18.53■□□□□ 0.56
USP39-217ENST00000491659 HSP90AB4PQ58FF6 505 aa18.53■□□□□ 0.56
USP39-217ENST00000491659 PI16Q6UXB8 463 aa18.53■□□□□ 0.56
USP39-217ENST00000491659 DBNDD2Q9BQY9 259 aa18.53■□□□□ 0.56
USP39-217ENST00000491659 USP40Q9NVE5 1235 aa18.53■□□□□ 0.56
USP39-217ENST00000491659 MROH7-TTC4A0A0A0MT08 1334 aa18.52■□□□□ 0.56
USP39-217ENST00000491659 MANSC4A6NHS7 340 aaPredicted RBP18.52■□□□□ 0.56
USP39-217ENST00000491659 PDE3AQ14432 1141 aa18.52■□□□□ 0.56
USP39-217ENST00000491659 DCAF15Q66K64 600 aa18.52■□□□□ 0.56
USP39-217ENST00000491659 RPAP2Q8IXW5 612 aaPredicted RBP18.52■□□□□ 0.56
USP39-217ENST00000491659 FAM151AQ8WW52 585 aa18.52■□□□□ 0.56
USP39-217ENST00000491659 ZBTB40Q9NUA8 1239 aa18.52■□□□□ 0.56
USP39-217ENST00000491659 EXOC6BQ9Y2D4 811 aa18.52■□□□□ 0.56
USP39-217ENST00000491659 TM4SF4P48230 202 aa18.51■□□□□ 0.55
USP39-217ENST00000491659 GSTO1P78417 241 aa18.51■□□□□ 0.55
USP39-217ENST00000491659 MECOMQ03112 1051 aa18.51■□□□□ 0.55
USP39-217ENST00000491659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.51■□□□□ 0.55
USP39-217ENST00000491659 ELP3Q9H9T3 547 aa18.51■□□□□ 0.55
USP39-217ENST00000491659 RAI14Q9P0K7 980 aa18.51■□□□□ 0.55
USP39-217ENST00000491659 CSADQ9Y600 493 aa18.51■□□□□ 0.55
USP39-217ENST00000491659 BTDP43251 543 aa18.5■□□□□ 0.55
USP39-217ENST00000491659 MAP3K9P80192 1104 aa18.5■□□□□ 0.55
USP39-217ENST00000491659 TCP10Q12799 353 aa18.5■□□□□ 0.55
USP39-217ENST00000491659 NFIAQ12857 509 aa18.5■□□□□ 0.55
USP39-217ENST00000491659 FAM163AQ96GL9 167 aaPredicted RBP18.5■□□□□ 0.55
USP39-217ENST00000491659 LRP2BPQ9P2M1 347 aa18.5■□□□□ 0.55
USP39-217ENST00000491659 DBNLQ9UJU6 430 aaKnown RBP18.5■□□□□ 0.55
USP39-217ENST00000491659 MYO5AQ9Y4I1 1855 aaKnown RBP18.5■□□□□ 0.55
USP39-217ENST00000491659 CAPN15O75808 1086 aa18.49■□□□□ 0.55
USP39-217ENST00000491659 LDHCP07864 332 aa18.49■□□□□ 0.55
USP39-217ENST00000491659 INHBEP58166 350 aa18.49■□□□□ 0.55
USP39-217ENST00000491659 VGLL4Q14135 290 aa18.49■□□□□ 0.55
USP39-217ENST00000491659 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.49■□□□□ 0.55
USP39-217ENST00000491659 TBC1D9Q6ZT07 1266 aa18.49■□□□□ 0.55
USP39-217ENST00000491659 EAF2Q96CJ1 260 aaPredicted RBP18.49■□□□□ 0.55
USP39-217ENST00000491659 OPTNQ96CV9 577 aa18.49■□□□□ 0.55
USP39-217ENST00000491659 ZNF512BQ96KM6 892 aaPredicted RBP18.49■□□□□ 0.55
USP39-217ENST00000491659 WRNIP1Q96S55 665 aa18.49■□□□□ 0.55
USP39-217ENST00000491659 CCDC8Q9H0W5 538 aaPredicted RBP18.49■□□□□ 0.55
USP39-217ENST00000491659 FAM198AQ9UFP1 575 aa18.49■□□□□ 0.55
USP39-217ENST00000491659 RFX7Q2KHR2 1363 aa18.49■□□□□ 0.55
USP39-217ENST00000491659 ALDH1A1P00352 501 aa18.48■□□□□ 0.55
USP39-217ENST00000491659 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
USP39-217ENST00000491659 AACSQ86V21 672 aa18.48■□□□□ 0.55
USP39-217ENST00000491659 NSUN4Q96CB9 384 aaKnown RBP18.48■□□□□ 0.55
USP39-217ENST00000491659 IDI2Q9BXS1 227 aa18.48■□□□□ 0.55
USP39-217ENST00000491659 ZNF341Q9BYN7 854 aa18.48■□□□□ 0.55
USP39-217ENST00000491659 SNRKQ9NRH2 765 aa18.48■□□□□ 0.55
USP39-217ENST00000491659 TLR7Q9NYK1 1049 aaKnown RBP18.48■□□□□ 0.55
USP39-217ENST00000491659 GPR75-ASB3A0A0A6YYF3 556 aa18.47■□□□□ 0.55
USP39-217ENST00000491659 ENTPD3O75355 529 aa18.47■□□□□ 0.55
USP39-217ENST00000491659 RGS3P49796 1198 aa18.47■□□□□ 0.55
USP39-217ENST00000491659 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
USP39-217ENST00000491659 NOL10Q9BSC4 688 aaKnown RBP18.47■□□□□ 0.55
USP39-217ENST00000491659 GJA5P36382 358 aa18.46■□□□□ 0.55
USP39-217ENST00000491659 MIGA2Q7L4E1 593 aa18.46■□□□□ 0.55
USP39-217ENST00000491659 KIF1BPQ96EK5 621 aa18.46■□□□□ 0.55
USP39-217ENST00000491659 FOCADQ5VW36 1801 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 APBB1O00213 710 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 TBC1D8O95759 1140 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 MAP4K4O95819 1239 aaPredicted RBP18.45■□□□□ 0.54
USP39-217ENST00000491659 PICALMQ13492 652 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 OTUD7BQ6GQQ9 843 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
USP39-217ENST00000491659 IFNL1Q8IU54 200 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 ZSCAN29Q8IWY8 852 aaPredicted RBP18.45■□□□□ 0.54
USP39-217ENST00000491659 SIRT2Q8IXJ6 389 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 ZNF384Q8TF68 577 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 OTUD5Q96G74 571 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 YTHDC1Q96MU7 727 aaKnown RBP18.45■□□□□ 0.54
USP39-217ENST00000491659 IL1RAPL2Q9NP60 686 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 SNCAIPQ9Y6H5 919 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 CDK5RAP2Q96SN8 1893 aa18.45■□□□□ 0.54
USP39-217ENST00000491659 SPDYE5A6NIY4 337 aa18.44■□□□□ 0.54
USP39-217ENST00000491659 IGSF3O75054 1194 aa18.44■□□□□ 0.54
USP39-217ENST00000491659 WDHD1O75717 1129 aaPredicted RBP18.44■□□□□ 0.54
USP39-217ENST00000491659 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms