RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 CEP290O15078 2479 aa11.02□□□□□ -0.65
SKAP2-207ENST00000490456 ECM29Q5VYK3 1845 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 ANKRD18BA2A2Z9 1011 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 USP17L3A6NCW0 530 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 USP17L4A6NCW7 530 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 IGHMBP2P38935 993 aaKnown RBP11.01□□□□□ -0.65
SKAP2-207ENST00000490456 MMP14P50281 582 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 PDE3AQ14432 1141 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 MVPQ14764 893 aaKnown RBP11.01□□□□□ -0.65
SKAP2-207ENST00000490456 CCDC57Q2TAC2 916 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 NBPF9Q3BBW0 867 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 RABL6Q3YEC7 729 aaPredicted RBP11.01□□□□□ -0.65
SKAP2-207ENST00000490456 PRAMEF18Q5VWM3 479 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 USP17L1Q7RTZ2 530 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 PODNQ7Z5L7 613 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 ANKIB1Q9P2G1 1089 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 COG6Q9Y2V7 657 aa11.01□□□□□ -0.65
SKAP2-207ENST00000490456 COL1A1P02452 1464 aaPredicted RBP11□□□□□ -0.65
SKAP2-207ENST00000490456 ZBTB7BO15156 539 aaPredicted RBP11□□□□□ -0.65
SKAP2-207ENST00000490456 GNAI2P04899 355 aa11□□□□□ -0.65
SKAP2-207ENST00000490456 ZBTB48P10074 688 aaPredicted RBP11□□□□□ -0.65
SKAP2-207ENST00000490456 PSEN2P49810 448 aa11□□□□□ -0.65
SKAP2-207ENST00000490456 TAF7LQ5H9L4 462 aa11□□□□□ -0.65
SKAP2-207ENST00000490456 LDLRAD1Q5T700 205 aa11□□□□□ -0.65
SKAP2-207ENST00000490456 OGFOD1Q8N543 542 aa11□□□□□ -0.65
SKAP2-207ENST00000490456 SLC17A8Q8NDX2 589 aa11□□□□□ -0.65
SKAP2-207ENST00000490456 MPHOSPH8Q99549 860 aa11□□□□□ -0.65
SKAP2-207ENST00000490456 EFCC1Q9HA90 598 aa11□□□□□ -0.65
SKAP2-207ENST00000490456 SCAF8Q9UPN6 1271 aaKnown RBP11□□□□□ -0.65
SKAP2-207ENST00000490456 MYO3BQ8WXR4 1341 aa11□□□□□ -0.65
SKAP2-207ENST00000490456 WNT10BO00744 389 aa10.99□□□□□ -0.65
SKAP2-207ENST00000490456 HRO43593 1189 aa10.99□□□□□ -0.65
SKAP2-207ENST00000490456 DMRTA1Q5VZB9 504 aa10.99□□□□□ -0.65
SKAP2-207ENST00000490456 OTUD7BQ6GQQ9 843 aa10.99□□□□□ -0.65
SKAP2-207ENST00000490456 NBPF11Q86T75 865 aa10.99□□□□□ -0.65
SKAP2-207ENST00000490456 APOBEC3FQ8IUX4 373 aaKnown RBP10.99□□□□□ -0.65
SKAP2-207ENST00000490456 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
SKAP2-207ENST00000490456 ZNF594Q96JF6 807 aaPredicted RBP10.99□□□□□ -0.65
SKAP2-207ENST00000490456 ZNF333Q96JL9 665 aa10.99□□□□□ -0.65
SKAP2-207ENST00000490456 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
SKAP2-207ENST00000490456 BSDC1Q9NW68 430 aaPredicted RBP10.99□□□□□ -0.65
SKAP2-207ENST00000490456 DDX19BQ9UMR2 479 aa10.99□□□□□ -0.65
SKAP2-207ENST00000490456 UNCXA6NJT0 531 aa10.98□□□□□ -0.65
SKAP2-207ENST00000490456 H0YGN5 161 aa10.98□□□□□ -0.65
SKAP2-207ENST00000490456 SP3Q02447 781 aa10.98□□□□□ -0.65
SKAP2-207ENST00000490456 PRKG1Q13976 671 aa10.98□□□□□ -0.65
SKAP2-207ENST00000490456 ARHGEF6Q15052 776 aa10.98□□□□□ -0.65
SKAP2-207ENST00000490456 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
SKAP2-207ENST00000490456 ANGEL1Q9UNK9 670 aaKnown RBP10.98□□□□□ -0.65
SKAP2-207ENST00000490456 XDHP47989 1333 aa10.98□□□□□ -0.65
SKAP2-207ENST00000490456 IGF2BP3O00425 579 aaKnown RBP eCLIP10.97□□□□□ -0.65
SKAP2-207ENST00000490456 CRHR2Q13324 411 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 MAP3K11Q16584 847 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 SLC9C1Q4G0N8 1177 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 LDHAL6AQ6ZMR3 332 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 KLHDC4Q8TBB5 520 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 WNK4Q96J92 1243 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
SKAP2-207ENST00000490456 MINPP1Q9UNW1 487 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 SUPT16HQ9Y5B9 1047 aaKnown RBP10.97□□□□□ -0.65
SKAP2-207ENST00000490456 SPEF2Q9C093 1822 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 CACNA1FO60840 1977 aa10.97□□□□□ -0.65
SKAP2-207ENST00000490456 MED23Q9ULK4 1368 aa10.96□□□□□ -0.65
SKAP2-207ENST00000490456 SRGAP3O43295 1099 aa10.96□□□□□ -0.65
SKAP2-207ENST00000490456 PPP1R12BO60237 982 aaPredicted RBP10.96□□□□□ -0.65
SKAP2-207ENST00000490456 ATP2B4P23634 1241 aa10.96□□□□□ -0.65
SKAP2-207ENST00000490456 SLC4A8Q2Y0W8 1093 aa10.96□□□□□ -0.65
SKAP2-207ENST00000490456 CNNM1Q9NRU3 951 aa10.96□□□□□ -0.65
SKAP2-207ENST00000490456 MYH3P11055 1940 aa10.96□□□□□ -0.66
SKAP2-207ENST00000490456 SASH1O94885 1247 aa10.95□□□□□ -0.66
SKAP2-207ENST00000490456 RFX5P48382 616 aaPredicted RBP10.95□□□□□ -0.66
SKAP2-207ENST00000490456 FOXK1P85037 733 aa10.95□□□□□ -0.66
SKAP2-207ENST00000490456 CHRNDQ07001 517 aa10.95□□□□□ -0.66
SKAP2-207ENST00000490456 MTX1Q13505 466 aa10.95□□□□□ -0.66
SKAP2-207ENST00000490456 DACT2Q5SW24 774 aa10.95□□□□□ -0.66
SKAP2-207ENST00000490456 STRIP1Q5VSL9 837 aa10.95□□□□□ -0.66
SKAP2-207ENST00000490456 KCNK17Q96T54 332 aa10.95□□□□□ -0.66
SKAP2-207ENST00000490456 PUS3Q9BZE2 481 aaKnown RBP10.95□□□□□ -0.66
SKAP2-207ENST00000490456 ZBTB40Q9NUA8 1239 aa10.95□□□□□ -0.66
SKAP2-207ENST00000490456 COL6A3P12111 3177 aa10.95□□□□□ -0.66
SKAP2-207ENST00000490456 RANBP2P49792 3224 aaKnown RBP10.94□□□□□ -0.66
SKAP2-207ENST00000490456 OTOFQ9HC10 1997 aa10.94□□□□□ -0.66
SKAP2-207ENST00000490456 A0A0C4DFX4 3053 aa10.94□□□□□ -0.66
SKAP2-207ENST00000490456 PNMA6EA0A0J9YXQ4 647 aa10.94□□□□□ -0.66
SKAP2-207ENST00000490456 LRRC24Q50LG9 513 aa10.94□□□□□ -0.66
SKAP2-207ENST00000490456 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
SKAP2-207ENST00000490456 CRBNQ96SW2 442 aa10.94□□□□□ -0.66
SKAP2-207ENST00000490456 ANKRD2Q9GZV1 360 aa10.94□□□□□ -0.66
SKAP2-207ENST00000490456 SIL1Q9H173 461 aa10.94□□□□□ -0.66
SKAP2-207ENST00000490456 RBM27Q9P2N5 1060 aaKnown RBP10.94□□□□□ -0.66
SKAP2-207ENST00000490456 PA2G4Q9UQ80 394 aaKnown RBP10.94□□□□□ -0.66
SKAP2-207ENST00000490456 PPP2R3BQ9Y5P8 575 aa10.94□□□□□ -0.66
SKAP2-207ENST00000490456 CUL9Q8IWT3 2517 aa10.94□□□□□ -0.66
SKAP2-207ENST00000490456 TAF5LO75529 589 aa10.93□□□□□ -0.66
SKAP2-207ENST00000490456 PPP1R37O75864 691 aa10.93□□□□□ -0.66
SKAP2-207ENST00000490456 KCNJ4P48050 445 aa10.93□□□□□ -0.66
SKAP2-207ENST00000490456 ATP8B2P98198 1209 aa10.93□□□□□ -0.66
SKAP2-207ENST00000490456 METTL24Q5JXM2 366 aa10.93□□□□□ -0.66
SKAP2-207ENST00000490456 CEP85Q6P2H3 762 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms