RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 RABL6Q3YEC7 729 aaPredicted RBP17.58■□□□□ 0.4
VARS-227ENST00000489979 VGLL2Q8N8G2 317 aa17.58■□□□□ 0.4
VARS-227ENST00000489979 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.58■□□□□ 0.4
VARS-227ENST00000489979 SHISA4Q96DD7 197 aa17.58■□□□□ 0.4
VARS-227ENST00000489979 AK9Q5TCS8 1911 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
VARS-227ENST00000489979 UTYO14607 1347 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 MAST3O60307 1309 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 PDE8BO95263 885 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 HHIPL2Q6UWX4 724 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 CHRDL2Q6WN34 429 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 DPF3Q92784 378 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 TRIM47Q96LD4 638 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 MRS2Q9HD23 443 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 SRRDQ9UH36 339 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 SUGT1Q9Y2Z0 365 aa17.57■□□□□ 0.4
VARS-227ENST00000489979 PDHXO00330 501 aa17.56■□□□□ 0.4
VARS-227ENST00000489979 OSBPP22059 807 aa17.56■□□□□ 0.4
VARS-227ENST00000489979 ANKRD23Q86SG2 305 aa17.56■□□□□ 0.4
VARS-227ENST00000489979 KLHDC4Q8TBB5 520 aa17.56■□□□□ 0.4
VARS-227ENST00000489979 RAET1EQ8TD07 263 aa17.56■□□□□ 0.4
VARS-227ENST00000489979 MYH13Q9UKX3 1938 aa17.55■□□□□ 0.4
VARS-227ENST00000489979 ADGRA2Q96PE1 1338 aa17.55■□□□□ 0.4
VARS-227ENST00000489979 FMNL1O95466 1100 aaPredicted RBP17.55■□□□□ 0.4
VARS-227ENST00000489979 HOXD10P28358 340 aa17.55■□□□□ 0.4
VARS-227ENST00000489979 GRK4P32298 578 aa17.55■□□□□ 0.4
VARS-227ENST00000489979 KCNH4Q9UQ05 1017 aa17.55■□□□□ 0.4
VARS-227ENST00000489979 MYPNQ86TC9 1320 aa17.54■□□□□ 0.4
VARS-227ENST00000489979 IFIT1P09914 478 aaKnown RBP17.54■□□□□ 0.4
VARS-227ENST00000489979 FAM151AQ8WW52 585 aa17.54■□□□□ 0.4
VARS-227ENST00000489979 RBM27Q9P2N5 1060 aaKnown RBP17.54■□□□□ 0.4
VARS-227ENST00000489979 ZNF112Q9UJU3 913 aa17.54■□□□□ 0.4
VARS-227ENST00000489979 RANBP2P49792 3224 aaKnown RBP17.53■□□□□ 0.4
VARS-227ENST00000489979 CCL5P13501 91 aa17.53■□□□□ 0.4
VARS-227ENST00000489979 FGFR2P21802 821 aa17.53■□□□□ 0.4
VARS-227ENST00000489979 TCP10Q12799 353 aa17.53■□□□□ 0.4
VARS-227ENST00000489979 MOGSQ13724 837 aa17.53■□□□□ 0.4
VARS-227ENST00000489979 PUM3Q15397 648 aaKnown RBP17.53■□□□□ 0.4
VARS-227ENST00000489979 NKX2-3Q8TAU0 364 aa17.53■□□□□ 0.4
VARS-227ENST00000489979 KIF16BQ96L93 1317 aa17.52■□□□□ 0.4
VARS-227ENST00000489979 GJB1P08034 283 aa17.52■□□□□ 0.4
VARS-227ENST00000489979 GJA8P48165 433 aa17.52■□□□□ 0.4
VARS-227ENST00000489979 CDC42EP5Q6NZY7 148 aa17.52■□□□□ 0.4
VARS-227ENST00000489979 UBE2Q1Q7Z7E8 422 aa17.52■□□□□ 0.4
VARS-227ENST00000489979 WDR66Q8TBY9 1149 aa17.52■□□□□ 0.4
VARS-227ENST00000489979 RNF208Q9H0X6 261 aa17.52■□□□□ 0.4
VARS-227ENST00000489979 BIN2Q9UBW5 565 aaPredicted RBP17.52■□□□□ 0.4
VARS-227ENST00000489979 DAGLAQ9Y4D2 1042 aa17.52■□□□□ 0.4
VARS-227ENST00000489979 MGAMO43451 1857 aa17.52■□□□□ 0.39
VARS-227ENST00000489979 PRKCZQ05513 592 aa17.51■□□□□ 0.39
VARS-227ENST00000489979 NFIAQ12857 509 aa17.51■□□□□ 0.39
VARS-227ENST00000489979 NOL9Q5SY16 702 aaKnown RBP17.51■□□□□ 0.39
VARS-227ENST00000489979 PARK7Q99497 189 aaKnown RBP17.51■□□□□ 0.39
VARS-227ENST00000489979 CYP2C8P10632 490 aa17.5■□□□□ 0.39
VARS-227ENST00000489979 BCRP11274 1271 aa17.5■□□□□ 0.39
VARS-227ENST00000489979 SLC5A1P13866 664 aa17.5■□□□□ 0.39
VARS-227ENST00000489979 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
VARS-227ENST00000489979 FCGRTP55899 365 aa17.5■□□□□ 0.39
VARS-227ENST00000489979 UBXN2AP68543 259 aa17.5■□□□□ 0.39
VARS-227ENST00000489979 DIXDC1Q155Q3 683 aa17.5■□□□□ 0.39
VARS-227ENST00000489979 GPAT2Q6NUI2 795 aa17.5■□□□□ 0.39
VARS-227ENST00000489979 HTATIP2Q9BUP3 242 aa17.5■□□□□ 0.39
VARS-227ENST00000489979 CXCL11O14625 94 aa17.49■□□□□ 0.39
VARS-227ENST00000489979 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
VARS-227ENST00000489979 LPIN2Q92539 896 aa17.49■□□□□ 0.39
VARS-227ENST00000489979 FAM198AQ9UFP1 575 aa17.49■□□□□ 0.39
VARS-227ENST00000489979 GABRQQ9UN88 632 aa17.49■□□□□ 0.39
VARS-227ENST00000489979 EYA2O00167 538 aa17.48■□□□□ 0.39
VARS-227ENST00000489979 PRDX5P30044 214 aa17.48■□□□□ 0.39
VARS-227ENST00000489979 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
VARS-227ENST00000489979 SLAIN1Q8ND83 568 aa17.48■□□□□ 0.39
VARS-227ENST00000489979 USP44Q9H0E7 712 aa17.48■□□□□ 0.39
VARS-227ENST00000489979 USP40Q9NVE5 1235 aa17.48■□□□□ 0.39
VARS-227ENST00000489979 FARP2O94887 1054 aaPredicted RBP17.47■□□□□ 0.39
VARS-227ENST00000489979 RFX5P48382 616 aaPredicted RBP17.47■□□□□ 0.39
VARS-227ENST00000489979 U2AF1L4Q8WU68 220 aaKnown RBP17.47■□□□□ 0.39
VARS-227ENST00000489979 UNC93B1Q9H1C4 597 aa17.47■□□□□ 0.39
VARS-227ENST00000489979 PRO3102Q9H379 93 aa17.47■□□□□ 0.39
VARS-227ENST00000489979 NR2E3Q9Y5X4 410 aa17.47■□□□□ 0.39
VARS-227ENST00000489979 ZBTB7BO15156 539 aaPredicted RBP17.46■□□□□ 0.39
VARS-227ENST00000489979 ZHX2Q9Y6X8 837 aa17.46■□□□□ 0.39
VARS-227ENST00000489979 DOCK2Q92608 1830 aa17.46■□□□□ 0.39
VARS-227ENST00000489979 PTPRCP08575 1304 aa17.46■□□□□ 0.38
VARS-227ENST00000489979 A0A0G2JLL6 359 aaPredicted RBP17.45■□□□□ 0.38
VARS-227ENST00000489979 PHF20L1A8MW92 1017 aa17.45■□□□□ 0.38
VARS-227ENST00000489979 ADCY3O60266 1144 aa17.45■□□□□ 0.38
VARS-227ENST00000489979 SGPL1O95470 568 aa17.45■□□□□ 0.38
VARS-227ENST00000489979 LDHBP07195 334 aaKnown RBP17.45■□□□□ 0.38
VARS-227ENST00000489979 FASTKD5Q7L8L6 764 aaKnown RBP17.45■□□□□ 0.38
VARS-227ENST00000489979 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
VARS-227ENST00000489979 PRRT2Q7Z6L0 340 aaPredicted RBP17.45■□□□□ 0.38
VARS-227ENST00000489979 SCYL3Q8IZE3 742 aa17.45■□□□□ 0.38
VARS-227ENST00000489979 PICK1Q9NRD5 415 aa17.45■□□□□ 0.38
VARS-227ENST00000489979 MYH2Q9UKX2 1941 aa17.45■□□□□ 0.38
VARS-227ENST00000489979 ATRNL1Q5VV63 1379 aa17.44■□□□□ 0.38
VARS-227ENST00000489979 PTPRAP18433 802 aa17.44■□□□□ 0.38
VARS-227ENST00000489979 FLT3LGP49771 235 aa17.44■□□□□ 0.38
VARS-227ENST00000489979 GADL1Q6ZQY3 521 aa17.44■□□□□ 0.38
VARS-227ENST00000489979 GNL3LQ9NVN8 582 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms