RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	FAM155A	B1AL88	458 aa	Predicted RBP	13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	APBB1	O00213	710 aa		13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	SLC10A3	P09131	477 aa		13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	CACNB3	P54284	484 aa		13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	PI16	Q6UXB8	463 aa		13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	FAM83A	Q86UY5	434 aa		13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	AACS	Q86V21	672 aa		13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	CLASRP	Q8N2M8	674 aa	Known RBP	13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	KIF1BP	Q96EK5	621 aa		13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	TMEM39B	Q9GZU3	492 aa		13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	DBNL	Q9UJU6	430 aa	Known RBP	13.58	□□□□□ -0.23
GGA1-222	ENST00000489772	ARAP2	Q8WZ64	1704 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	GSTO1	P78417	241 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	MECOM	Q03112	1051 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	CDC42EP5	Q6NZY7	148 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	TBC1D9	Q6ZT07	1266 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	RASAL3	Q86YV0	1011 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	FAM163A	Q96GL9	167 aa	Predicted RBP	13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	IL1RAPL2	Q9NP60	686 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	USP40	Q9NVE5	1235 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	TLR7	Q9NYK1	1049 aa	Known RBP	13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	RAI14	Q9P0K7	980 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	LRP2BP	Q9P2M1	347 aa		13.58	□□□□□ -0.24
GGA1-222	ENST00000489772	PAPPA2	Q9BXP8	1791 aa		13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	UNCX	A6NJT0	531 aa		13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	FOXN1	O15353	648 aa		13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	IREB2	P48200	963 aa	Known RBP	13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	CTCF	P49711	727 aa	Predicted RBP	13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	MAP3K11	Q16584	847 aa		13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	LDLRAD1	Q5T700	205 aa		13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	HOOK2	Q96ED9	719 aa		13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	TEPSIN	Q96N21	525 aa		13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	SNRK	Q9NRH2	765 aa		13.57	□□□□□ -0.24
GGA1-222	ENST00000489772	GAK	O14976	1311 aa		13.56	□□□□□ -0.24
GGA1-222	ENST00000489772	POLR2A	P24928	1970 aa	Known RBP	13.56	□□□□□ -0.24
GGA1-222	ENST00000489772	CA12	O43570	354 aa		13.56	□□□□□ -0.24
GGA1-222	ENST00000489772	LDHC	P07864	332 aa		13.56	□□□□□ -0.24
GGA1-222	ENST00000489772	IFIT2	P09913	472 aa	Known RBP	13.56	□□□□□ -0.24
GGA1-222	ENST00000489772	KIF23	Q02241	960 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-222	ENST00000489772	REM2	Q8IYK8	340 aa	Predicted RBP	13.56	□□□□□ -0.24
GGA1-222	ENST00000489772	NSUN4	Q96CB9	384 aa	Known RBP	13.56	□□□□□ -0.24
GGA1-222	ENST00000489772	FZD1	Q9UP38	647 aa		13.56	□□□□□ -0.24
GGA1-222	ENST00000489772	MROH7-TTC4	A0A0A0MT08	1334 aa		13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	SSC5D	A1L4H1	1573 aa		13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	IGSF3	O75054	1194 aa		13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	USP2	O75604	605 aa	Predicted RBP	13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	BTD	P43251	543 aa		13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	CDAN1	Q8IWY9	1227 aa		13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	FAM151A	Q8WW52	585 aa		13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	SLC10A4	Q96EP9	437 aa		13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	ZIC5	Q96T25	663 aa		13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	BCL11A	Q9H165	835 aa		13.55	□□□□□ -0.24
GGA1-222	ENST00000489772	GPR75-ASB3	A0A0A6YYF3	556 aa		13.54	□□□□□ -0.24
GGA1-222	ENST00000489772	CYP2E1	P05181	493 aa	Predicted RBP	13.54	□□□□□ -0.24
GGA1-222	ENST00000489772	ZAP70	P43403	619 aa		13.54	□□□□□ -0.24
GGA1-222	ENST00000489772	NFIA	Q12857	509 aa		13.54	□□□□□ -0.24
GGA1-222	ENST00000489772	ANKRD13A	Q8IZ07	590 aa		13.54	□□□□□ -0.24
GGA1-222	ENST00000489772	LRRCC1	Q9C099	1032 aa		13.54	□□□□□ -0.24
GGA1-222	ENST00000489772	THSD7B	Q9C0I4	1608 aa		13.53	□□□□□ -0.24
GGA1-222	ENST00000489772	MAP4K4	O95819	1239 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-222	ENST00000489772	TCP10	Q12799	353 aa		13.53	□□□□□ -0.24
GGA1-222	ENST00000489772	DCAF15	Q66K64	600 aa		13.53	□□□□□ -0.24
GGA1-222	ENST00000489772	NAA16	Q6N069	864 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-222	ENST00000489772	ZNF384	Q8TF68	577 aa		13.53	□□□□□ -0.24
GGA1-222	ENST00000489772	NOL10	Q9BSC4	688 aa	Known RBP	13.53	□□□□□ -0.24
GGA1-222	ENST00000489772	IDI2	Q9BXS1	227 aa		13.53	□□□□□ -0.24
GGA1-222	ENST00000489772	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.53	□□□□□ -0.24
GGA1-222	ENST00000489772	ENTPD3	O75355	529 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	BAG3	O95817	575 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	LBX1	P52954	281 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	MKRN3	Q13064	507 aa	Known RBP	13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	SPRYD7	Q5W111	196 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	CLMN	Q96JQ2	1002 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	CSRNP1	Q96S65	589 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	CRBN	Q96SW2	442 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	DCTPP1	Q9H773	170 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	PRDM10	Q9NQV6	1147 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	FAM198A	Q9UFP1	575 aa		13.52	□□□□□ -0.25
GGA1-222	ENST00000489772	WDHD1	O75717	1129 aa	Predicted RBP	13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	IDH1	O75874	414 aa	Known RBP	13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	ZBTB48	P10074	688 aa	Predicted RBP	13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	HSPA8	P11142	646 aa	Known RBP	13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	RGS3	P49796	1198 aa		13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	MAP3K9	P80192	1104 aa		13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	SREBF2	Q12772	1141 aa		13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	PICALM	Q13492	652 aa		13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	PIH1D3	Q9NQM4	214 aa	Known RBP	13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	SAGE1	Q9NXZ1	904 aa		13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	PCDHB15	Q9Y5E8	787 aa		13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	CSAD	Q9Y600	493 aa		13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	ECM29	Q5VYK3	1845 aa		13.51	□□□□□ -0.25
GGA1-222	ENST00000489772	RHBDL3	P58872	404 aa		13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	MAP3K12	Q12852	859 aa		13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	TTF1	Q15361	905 aa	Predicted RBP	13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	TMED8	Q6PL24	325 aa	Predicted RBP	13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	MIGA2	Q7L4E1	593 aa		13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms