RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SPRYD7Q5W111 196 aa11.19□□□□□ -0.62
HDAC6-232ENST00000489053 APOBEC3HQ6NTF7 200 aaKnown RBP11.19□□□□□ -0.62
HDAC6-232ENST00000489053 ZSCAN29Q8IWY8 852 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-232ENST00000489053 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
HDAC6-232ENST00000489053 ELP3Q9H9T3 547 aa11.19□□□□□ -0.62
HDAC6-232ENST00000489053 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
HDAC6-232ENST00000489053 FZD1Q9UP38 647 aa11.19□□□□□ -0.62
HDAC6-232ENST00000489053 COG6Q9Y2V7 657 aa11.19□□□□□ -0.62
HDAC6-232ENST00000489053 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
HDAC6-232ENST00000489053 FPGT-TNNI3KV9GXZ4 949 aa11.19□□□□□ -0.62
HDAC6-232ENST00000489053 THSD7BQ9C0I4 1608 aa11.18□□□□□ -0.62
HDAC6-232ENST00000489053 APBB1O00213 710 aa11.18□□□□□ -0.62
HDAC6-232ENST00000489053 ALDH1A1P00352 501 aa11.18□□□□□ -0.62
HDAC6-232ENST00000489053 INHBEP58166 350 aa11.18□□□□□ -0.62
HDAC6-232ENST00000489053 MAP3K9P80192 1104 aa11.18□□□□□ -0.62
HDAC6-232ENST00000489053 TCP10Q12799 353 aa11.18□□□□□ -0.62
HDAC6-232ENST00000489053 MAP3K11Q16584 847 aa11.18□□□□□ -0.62
HDAC6-232ENST00000489053 CEP85Q6P2H3 762 aa11.18□□□□□ -0.62
HDAC6-232ENST00000489053 CLMNQ96JQ2 1002 aa11.18□□□□□ -0.62
HDAC6-232ENST00000489053 POLR2AP24928 1970 aaKnown RBP11.17□□□□□ -0.62
HDAC6-232ENST00000489053 USP2O75604 605 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-232ENST00000489053 CDC42EP5Q6NZY7 148 aa11.17□□□□□ -0.62
HDAC6-232ENST00000489053 RPAP2Q8IXW5 612 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-232ENST00000489053 FAM151AQ8WW52 585 aa11.17□□□□□ -0.62
HDAC6-232ENST00000489053 WNK4Q96J92 1243 aa11.17□□□□□ -0.62
HDAC6-232ENST00000489053 WRNIP1Q96S55 665 aa11.17□□□□□ -0.62
HDAC6-232ENST00000489053 ZNF341Q9BYN7 854 aa11.17□□□□□ -0.62
HDAC6-232ENST00000489053 HMG20BQ9P0W2 317 aa11.17□□□□□ -0.62
HDAC6-232ENST00000489053 EXOC6BQ9Y2D4 811 aa11.17□□□□□ -0.62
HDAC6-232ENST00000489053 BAG3O95817 575 aa11.16□□□□□ -0.62
HDAC6-232ENST00000489053 ARID4AP29374 1257 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-232ENST00000489053 BTDP43251 543 aa11.16□□□□□ -0.62
HDAC6-232ENST00000489053 MECOMQ03112 1051 aa11.16□□□□□ -0.62
HDAC6-232ENST00000489053 PICALMQ13492 652 aa11.16□□□□□ -0.62
HDAC6-232ENST00000489053 DGKZQ13574 1117 aa11.16□□□□□ -0.62
HDAC6-232ENST00000489053 PDE3AQ14432 1141 aa11.16□□□□□ -0.62
HDAC6-232ENST00000489053 NAA16Q6N069 864 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-232ENST00000489053 AACSQ86V21 672 aa11.16□□□□□ -0.62
HDAC6-232ENST00000489053 CLASRPQ8N2M8 674 aaKnown RBP11.16□□□□□ -0.62
HDAC6-232ENST00000489053 DBNDD2Q9BQY9 259 aa11.16□□□□□ -0.62
HDAC6-232ENST00000489053 CCDC8Q9H0W5 538 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-232ENST00000489053 SNRKQ9NRH2 765 aa11.16□□□□□ -0.62
HDAC6-232ENST00000489053 NOP58Q9Y2X3 529 aaKnown RBP11.16□□□□□ -0.62
HDAC6-232ENST00000489053 ZNF646O15015 1829 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-232ENST00000489053 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 ZBTB22O15209 634 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 TBC1D8O95759 1140 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 IFIT2P09913 472 aaKnown RBP11.15□□□□□ -0.62
HDAC6-232ENST00000489053 TM4SF4P48230 202 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 RGS3P49796 1198 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 GTF2A2P52657 109 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 VGLL4Q14135 290 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 PI16Q6UXB8 463 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 TBC1D9Q6ZT07 1266 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 MIGA2Q7L4E1 593 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 OPTNQ96CV9 577 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 KIF1BPQ96EK5 621 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 OTUD5Q96G74 571 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 TEPSINQ96N21 525 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 SSC5DA1L4H1 1573 aa11.15□□□□□ -0.62
HDAC6-232ENST00000489053 RPAP1Q9BWH6 1393 aaPredicted RBP11.15□□□□□ -0.63
HDAC6-232ENST00000489053 CCL15-CCL14A0A0B4J2E2 113 aa11.14□□□□□ -0.63
HDAC6-232ENST00000489053 ENTPD3O75355 529 aa11.14□□□□□ -0.63
HDAC6-232ENST00000489053 MAP4K4O95819 1239 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-232ENST00000489053 PLCG2P16885 1265 aa11.14□□□□□ -0.63
HDAC6-232ENST00000489053 MCAMP43121 646 aa11.14□□□□□ -0.63
HDAC6-232ENST00000489053 NFIAQ12857 509 aa11.14□□□□□ -0.63
HDAC6-232ENST00000489053 CCL15Q16663 113 aa11.14□□□□□ -0.63
HDAC6-232ENST00000489053 ERO1BQ86YB8 467 aa11.14□□□□□ -0.63
HDAC6-232ENST00000489053 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
HDAC6-232ENST00000489053 PICK1Q9NRD5 415 aa11.14□□□□□ -0.63
HDAC6-232ENST00000489053 GAKO14976 1311 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 CCDC85CA6NKD9 419 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 RAB11FIP3O75154 756 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 IDH1O75874 414 aaKnown RBP11.13□□□□□ -0.63
HDAC6-232ENST00000489053 CETPP11597 493 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 SNAPC2Q13487 334 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 CTU1Q7Z7A3 348 aaKnown RBP11.13□□□□□ -0.63
HDAC6-232ENST00000489053 IFNL1Q8IU54 200 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 TEX11Q8IYF3 940 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC6-232ENST00000489053 NSUN4Q96CB9 384 aaKnown RBP11.13□□□□□ -0.63
HDAC6-232ENST00000489053 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-232ENST00000489053 ABHD8Q96I13 439 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 IL1RAPL2Q9NP60 686 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
HDAC6-232ENST00000489053 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-232ENST00000489053 DBNLQ9UJU6 430 aaKnown RBP11.13□□□□□ -0.63
HDAC6-232ENST00000489053 GPR75-ASB3A0A0A6YYF3 556 aa11.12□□□□□ -0.63
HDAC6-232ENST00000489053 IGSF3O75054 1194 aa11.12□□□□□ -0.63
HDAC6-232ENST00000489053 FKTNO75072 461 aa11.12□□□□□ -0.63
HDAC6-232ENST00000489053 MAP3K12Q12852 859 aa11.12□□□□□ -0.63
HDAC6-232ENST00000489053 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-232ENST00000489053 RHPN1Q8TCX5 695 aa11.12□□□□□ -0.63
HDAC6-232ENST00000489053 ZKSCAN4Q969J2 545 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-232ENST00000489053 EAF2Q96CJ1 260 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-232ENST00000489053 ZNF512BQ96KM6 892 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-232ENST00000489053 IDI2Q9BXS1 227 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms