RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 FAM43BQ6ZT52 329 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 DEPDC4Q8N2C3 294 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 ZBTB38Q8NAP3 1195 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 ZNF526Q8TF50 670 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 WNT2BQ93097 391 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 CDC5LQ99459 802 aaKnown RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 PPP1R12CQ9BZL4 782 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 NBPF3Q9H094 633 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 ZBTB3Q9H5J0 574 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 ABT1Q9ULW3 272 aaKnown RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 UBN2Q6ZU65 1347 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 FANCIQ9NVI1 1328 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 IRS2Q9Y4H2 1338 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 LGR5O75473 907 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 WDHD1O75717 1129 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 CELF2O95319 508 aaKnown RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 ZNF853P0CG23 659 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 CANXP27824 592 aaKnown RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 GCGRP47871 477 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 DGKZQ13574 1117 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 DIXDC1Q155Q3 683 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 CCDC152Q4G0S7 254 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 BICDL1Q6ZP65 573 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 TBC1D9Q6ZT07 1266 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 PRO3102Q9H379 93 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 IFT57Q9NWB7 429 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 DBF4Q9UBU7 674 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 HDAC9Q9UKV0 1011 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 HPS5Q9UPZ3 1129 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 NDUFB9Q9Y6M9 179 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 MAST3O60307 1309 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 ROBO3Q96MS0 1386 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 ADGRA2Q96PE1 1338 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 PDE8AO60658 829 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 DDX58O95786 925 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 PRKAR2BP31323 418 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 MTMR2Q13614 643 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 TNFAIP1Q13829 316 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 KIF4BQ2VIQ3 1234 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 SAMD7Q7Z3H4 446 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 PBXIP1Q96AQ6 731 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 CDCA5Q96FF9 252 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 ZNF277Q9NRM2 450 aaPredicted RBP3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 BSDC1Q9NW68 430 aaPredicted RBP3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 MKRN1Q9UHC7 482 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 IVNS1ABPQ9Y6Y0 642 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 USP17L3A6NCW0 530 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 USP17L4A6NCW7 530 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 SUPT20HL1Q3ZLR7 823 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 SUSD4Q5VX71 490 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 USP17L1Q7RTZ2 530 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 UBE2Q1Q7Z7E8 422 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 PACS2Q86VP3 889 aa3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 CNOT7Q9UIV1 285 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-203ENST00000488146 DOCK2Q92608 1830 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 A1BGP04217 495 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 CFHP08603 1231 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 IL1R1P14778 569 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 KIF23Q02241 960 aaPredicted RBP3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 FAM83AQ86UY5 434 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 WWC1Q8IX03 1113 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 SEZ6LQ9BYH1 1024 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 GGA1Q9UJY5 639 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 GPR25O00155 361 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 HOXD10P28358 340 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 SPRYD7Q5W111 196 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 CERS3Q8IU89 383 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 TBC1D16Q8TBP0 767 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 STK32AQ8WU08 396 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 HTATIP2Q9BUP3 242 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 BCL2L13Q9BXK5 485 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 PTPN22Q9Y2R2 807 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 USP16Q9Y5T5 823 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 SCN9AQ15858 1988 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 DOCK1Q14185 1865 aa3.51□□□□□ -1.85
DEPDC1-203ENST00000488146 UTYO14607 1347 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 SALL1Q9NSC2 1324 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 MAPK8IP3Q9UPT6 1336 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 MGAMO43451 1857 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 ECE2O60344 883 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 CSF1RP07333 972 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 EPS15P42566 896 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 HUNKP57058 714 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 MAP3K10Q02779 954 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 SLC39A6Q13433 755 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 RNF19BQ6ZMZ0 732 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 NBPF11Q86T75 865 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 TBC1D22AQ8WUA7 517 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 CSRNP1Q96S65 589 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 MAF1Q9H063 256 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 HDAC5Q9UQL6 1122 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 MYBBP1AQ9BQG0 1328 aaKnown RBP3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 YDJCA8MPS7 323 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 PPM1GO15355 546 aaPredicted RBP3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 RGS20O76081 388 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 IREB2P48200 963 aaKnown RBP3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 GTF2A2P52657 109 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 HIRAP54198 1017 aaPredicted RBP3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 RPS8P62241 208 aaKnown RBP3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 GNAI1P63096 354 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms