RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 PLCG2P16885 1265 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 CYP7A1P22680 504 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 MCCP23508 829 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 RPS12P25398 132 aaKnown RBP8.35□□□□□ -1.07
UBR4-214ENST00000486515 LMOD1P29536 600 aaPredicted RBP8.35□□□□□ -1.07
UBR4-214ENST00000486515 HOXD11P31277 338 aaPredicted RBP8.35□□□□□ -1.07
UBR4-214ENST00000486515 CWC27Q6UX04 472 aaKnown RBP8.35□□□□□ -1.07
UBR4-214ENST00000486515 PI16Q6UXB8 463 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 TBC1D9Q6ZT07 1266 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 AMOTL1Q8IY63 956 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 MAGEB6Q8N7X4 407 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 HELLSQ9NRZ9 838 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 NDUFB9Q9Y6M9 179 aa8.35□□□□□ -1.07
UBR4-214ENST00000486515 TIAM2Q8IVF5 1701 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 FAM205AQ6ZU69 1335 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 RAD50Q92878 1312 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 H7C1D1 291 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 APPP05067 770 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 GNAT2P19087 354 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 SCARF1Q14162 830 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 UBE3CQ15386 1083 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 MCMDC2Q4G0Z9 681 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 RSBN1LQ6PCB5 846 aaPredicted RBP8.34□□□□□ -1.07
UBR4-214ENST00000486515 AGBL3Q8NEM8 1001 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 APPBP2Q92624 585 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 TEKT1Q969V4 418 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 EDC3Q96F86 508 aaKnown RBP8.34□□□□□ -1.07
UBR4-214ENST00000486515 NACAP1Q9BZK3 213 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 ANTXR1Q9H6X2 564 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 PIH1D3Q9NQM4 214 aaKnown RBP8.34□□□□□ -1.07
UBR4-214ENST00000486515 TMOD2Q9NZR1 351 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 TTF2Q9UNY4 1162 aaKnown RBP8.34□□□□□ -1.07
UBR4-214ENST00000486515 TLL2Q9Y6L7 1015 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 VCANP13611 3396 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 ARAP2Q8WZ64 1704 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 RFX7Q2KHR2 1363 aa8.34□□□□□ -1.07
UBR4-214ENST00000486515 ZNF532Q9HCE3 1301 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 MAGEB6P1A0A0J9YX57 407 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 PSMD14O00487 310 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 PDE6AP16499 860 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 CHMLP26374 656 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 PRDX5P30044 214 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 MECOMQ03112 1051 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 CXCL9Q07325 125 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 KIAA0825Q8IV33 1275 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 GPC2Q8N158 579 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 OTUD5Q96G74 571 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 L3MBTL3Q96JM7 780 aaPredicted RBP8.33□□□□□ -1.08
UBR4-214ENST00000486515 RAPGEFL1Q9UHV5 662 aa8.33□□□□□ -1.08
UBR4-214ENST00000486515 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 RANBP2P49792 3224 aaKnown RBP8.32□□□□□ -1.08
UBR4-214ENST00000486515 FZD9O00144 591 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 VIL1P09327 827 aaKnown RBP8.32□□□□□ -1.08
UBR4-214ENST00000486515 USP17L8P0C7I0 530 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 ADD2P35612 726 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 USP5P45974 858 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 HDLBPQ00341 1268 aaKnown RBP8.32□□□□□ -1.08
UBR4-214ENST00000486515 FMR1Q06787 632 aaKnown RBP eCLIP8.32□□□□□ -1.088e-8■□□□□ 8.8
UBR4-214ENST00000486515 DLGAP5Q15398 846 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 PKN2Q16513 984 aaKnown RBP8.32□□□□□ -1.08
UBR4-214ENST00000486515 DACT2Q5SW24 774 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 RNF20Q5VTR2 975 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 NSUN4Q96CB9 384 aaKnown RBP8.32□□□□□ -1.08
UBR4-214ENST00000486515 CRNKL1Q9BZJ0 848 aaKnown RBP8.32□□□□□ -1.08
UBR4-214ENST00000486515 ANO2Q9NQ90 1003 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 CTNNA3Q9UI47 895 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 SERPINA10Q9UK55 444 aa8.32□□□□□ -1.08
UBR4-214ENST00000486515 SLX4Q8IY92 1834 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 ZKSCAN1P17029 563 aaPredicted RBP8.31□□□□□ -1.08
UBR4-214ENST00000486515 EPHX2P34913 555 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 SCNN1DP51172 638 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 NMIQ13287 307 aaPredicted RBP8.31□□□□□ -1.08
UBR4-214ENST00000486515 CST9Q5W186 159 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 HHIPL2Q6UWX4 724 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 CHRDL2Q6WN34 429 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 PNMA8AQ86V59 439 aaPredicted RBP8.31□□□□□ -1.08
UBR4-214ENST00000486515 MIGA1Q8NAN2 632 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 DPF2Q92785 391 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 ESYT1Q9BSJ8 1104 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 MRIQ9BWK5 157 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 AATFQ9NY61 560 aaKnown RBP eCLIP8.31□□□□□ -1.08
UBR4-214ENST00000486515 HACL1Q9UJ83 578 aa8.31□□□□□ -1.08
UBR4-214ENST00000486515 MROH7-TTC4A0A0A0MT08 1334 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 CCDC171Q6TFL3 1326 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 YDJCA8MPS7 323 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 MBD4O95243 580 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 SLC3A2P08195 630 aaKnown RBP8.3□□□□□ -1.08
UBR4-214ENST00000486515 BTDP43251 543 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 CRKP46108 304 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 TDO2P48775 406 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 TNNI2P48788 182 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 GMPSP49915 693 aaPredicted RBP8.3□□□□□ -1.08
UBR4-214ENST00000486515 TNFAIP1Q13829 316 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 ZMYM1Q5SVZ6 1142 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 RBM26Q5T8P6 1007 aaKnown RBP8.3□□□□□ -1.08
UBR4-214ENST00000486515 FAM227BQ96M60 508 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 TRIM34Q9BYJ4 488 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 NAPBQ9H115 298 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 KCNQ5Q9NR82 932 aa8.3□□□□□ -1.08
UBR4-214ENST00000486515 SAGE1Q9NXZ1 904 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms