RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.64■□□□□ 0.73
SIK3-211ENST00000485363 OPTNQ96CV9 577 aa19.64■□□□□ 0.73
SIK3-211ENST00000485363 NEUROD6Q96NK8 337 aa19.64■□□□□ 0.73
SIK3-211ENST00000485363 PDS5AQ29RF7 1337 aaKnown RBP19.64■□□□□ 0.73
SIK3-211ENST00000485363 VGLL4Q14135 290 aa19.63■□□□□ 0.73
SIK3-211ENST00000485363 OTUD7BQ6GQQ9 843 aa19.63■□□□□ 0.73
SIK3-211ENST00000485363 CDC42EP5Q6NZY7 148 aa19.63■□□□□ 0.73
SIK3-211ENST00000485363 FAM151AQ8WW52 585 aa19.63■□□□□ 0.73
SIK3-211ENST00000485363 AK9Q5TCS8 1911 aa19.63■□□□□ 0.73
SIK3-211ENST00000485363 MYH2Q9UKX2 1941 aa19.63■□□□□ 0.73
SIK3-211ENST00000485363 IGF2BP3O00425 579 aaKnown RBP eCLIP19.62■□□□□ 0.73
SIK3-211ENST00000485363 PKN2Q16513 984 aaKnown RBP19.62■□□□□ 0.73
SIK3-211ENST00000485363 DCAF15Q66K64 600 aa19.62■□□□□ 0.73
SIK3-211ENST00000485363 ABCF2Q9UG63 623 aa19.62■□□□□ 0.73
SIK3-211ENST00000485363 TESPA1A2RU30 521 aaPredicted RBP19.61■□□□□ 0.73
SIK3-211ENST00000485363 FKTNO75072 461 aa19.61■□□□□ 0.73
SIK3-211ENST00000485363 GORABQ5T7V8 394 aa19.61■□□□□ 0.73
SIK3-211ENST00000485363 SPTY2D1Q68D10 685 aaPredicted RBP19.61■□□□□ 0.73
SIK3-211ENST00000485363 DZIP1Q86YF9 867 aaKnown RBP19.61■□□□□ 0.73
SIK3-211ENST00000485363 ITPRIPQ8IWB1 547 aa19.61■□□□□ 0.73
SIK3-211ENST00000485363 SLF2Q8IX21 1173 aa19.61■□□□□ 0.73
SIK3-211ENST00000485363 WRNIP1Q96S55 665 aa19.61■□□□□ 0.73
SIK3-211ENST00000485363 R3HDMLQ9H3Y0 253 aa19.61■□□□□ 0.73
SIK3-211ENST00000485363 USP40Q9NVE5 1235 aa19.61■□□□□ 0.73
SIK3-211ENST00000485363 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.61■□□□□ 0.73
SIK3-211ENST00000485363 ATP8B2P98198 1209 aa19.6■□□□□ 0.73
SIK3-211ENST00000485363 POLA2Q14181 598 aa19.6■□□□□ 0.73
SIK3-211ENST00000485363 SPDYE5A6NIY4 337 aa19.59■□□□□ 0.73
SIK3-211ENST00000485363 TCP10Q12799 353 aa19.59■□□□□ 0.73
SIK3-211ENST00000485363 NFIAQ12857 509 aa19.59■□□□□ 0.73
SIK3-211ENST00000485363 SSH3Q8TE77 659 aa19.59■□□□□ 0.73
SIK3-211ENST00000485363 CNKSR2Q8WXI2 1034 aa19.59■□□□□ 0.73
SIK3-211ENST00000485363 OTUD5Q96G74 571 aa19.59■□□□□ 0.73
SIK3-211ENST00000485363 ZNF341Q9BYN7 854 aa19.59■□□□□ 0.73
SIK3-211ENST00000485363 GAKO14976 1311 aa19.58■□□□□ 0.73
SIK3-211ENST00000485363 ZBTB7BO15156 539 aaPredicted RBP19.58■□□□□ 0.72
SIK3-211ENST00000485363 RLBP1P12271 317 aa19.58■□□□□ 0.72
SIK3-211ENST00000485363 GTF2A2P52657 109 aa19.58■□□□□ 0.72
SIK3-211ENST00000485363 OS9Q13438 667 aaPredicted RBP19.58■□□□□ 0.72
SIK3-211ENST00000485363 ERICH6Q7L0X2 663 aa19.58■□□□□ 0.72
SIK3-211ENST00000485363 MIGA2Q7L4E1 593 aa19.58■□□□□ 0.72
SIK3-211ENST00000485363 ZKSCAN4Q969J2 545 aaPredicted RBP19.58■□□□□ 0.72
SIK3-211ENST00000485363 MS4A4AQ96JQ5 239 aa19.58■□□□□ 0.72
SIK3-211ENST00000485363 PTPN18Q99952 460 aa19.58■□□□□ 0.72
SIK3-211ENST00000485363 C1orf115Q9H7X2 142 aa19.58■□□□□ 0.72
SIK3-211ENST00000485363 FAM198AQ9UFP1 575 aa19.58■□□□□ 0.72
SIK3-211ENST00000485363 SNCAIPQ9Y6H5 919 aa19.58■□□□□ 0.72
SIK3-211ENST00000485363 RGS19P49795 217 aa19.57■□□□□ 0.72
SIK3-211ENST00000485363 ERO1BQ86YB8 467 aa19.57■□□□□ 0.72
SIK3-211ENST00000485363 SPATA5Q8NB90 893 aa19.57■□□□□ 0.72
SIK3-211ENST00000485363 FAM163AQ96GL9 167 aaPredicted RBP19.57■□□□□ 0.72
SIK3-211ENST00000485363 GPR108Q9NPR9 543 aa19.57■□□□□ 0.72
SIK3-211ENST00000485363 HMG20BQ9P0W2 317 aa19.57■□□□□ 0.72
SIK3-211ENST00000485363 CCL15-CCL14A0A0B4J2E2 113 aa19.56■□□□□ 0.72
SIK3-211ENST00000485363 SURF6O75683 361 aaKnown RBP19.56■□□□□ 0.72
SIK3-211ENST00000485363 UQCRFS1P1P0C7P4 283 aa19.56■□□□□ 0.72
SIK3-211ENST00000485363 ARID4AP29374 1257 aaPredicted RBP19.56■□□□□ 0.72
SIK3-211ENST00000485363 CRHR2Q13324 411 aa19.56■□□□□ 0.72
SIK3-211ENST00000485363 CCL15Q16663 113 aa19.56■□□□□ 0.72
SIK3-211ENST00000485363 BRI3BPQ8WY22 251 aa19.56■□□□□ 0.72
SIK3-211ENST00000485363 IDI2Q9BXS1 227 aa19.56■□□□□ 0.72
SIK3-211ENST00000485363 MROH7-TTC4A0A0A0MT08 1334 aa19.55■□□□□ 0.72
SIK3-211ENST00000485363 ENTPD3O75355 529 aa19.55■□□□□ 0.72
SIK3-211ENST00000485363 BTDP43251 543 aa19.55■□□□□ 0.72
SIK3-211ENST00000485363 MLLT1Q03111 559 aaPredicted RBP19.55■□□□□ 0.72
SIK3-211ENST00000485363 MECOMQ03112 1051 aa19.55■□□□□ 0.72
SIK3-211ENST00000485363 TNNI3KQ59H18 835 aa19.55■□□□□ 0.72
SIK3-211ENST00000485363 HPS5Q9UPZ3 1129 aa19.55■□□□□ 0.72
SIK3-211ENST00000485363 FPGT-TNNI3KV9GXZ4 949 aa19.55■□□□□ 0.72
SIK3-211ENST00000485363 DOCK2Q92608 1830 aa19.54■□□□□ 0.72
SIK3-211ENST00000485363 CETPP11597 493 aa19.54■□□□□ 0.72
SIK3-211ENST00000485363 RGS3P49796 1198 aa19.54■□□□□ 0.72
SIK3-211ENST00000485363 GSTO1P78417 241 aa19.54■□□□□ 0.72
SIK3-211ENST00000485363 FBXO46Q6PJ61 603 aaPredicted RBP19.54■□□□□ 0.72
SIK3-211ENST00000485363 PI16Q6UXB8 463 aa19.54■□□□□ 0.72
SIK3-211ENST00000485363 ZNF112Q9UJU3 913 aa19.54■□□□□ 0.72
SIK3-211ENST00000485363 GPR75-ASB3A0A0A6YYF3 556 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 IRF6O14896 467 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 LDHCP07864 332 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 MS4A1P11836 297 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 INPP5BP32019 993 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 MCAMP43121 646 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 PPATQ06203 517 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 PPIL2Q13356 520 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 SNAPC2Q13487 334 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 CCDC158Q5M9N0 1113 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 ZFPM1Q8IX07 1006 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 ERO1AQ96HE7 468 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 RAI14Q9P0K7 980 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 NOP58Q9Y2X3 529 aaKnown RBP19.53■□□□□ 0.72
SIK3-211ENST00000485363 RFX7Q2KHR2 1363 aa19.53■□□□□ 0.72
SIK3-211ENST00000485363 WDHD1O75717 1129 aaPredicted RBP19.52■□□□□ 0.72
SIK3-211ENST00000485363 TAF1CQ15572 869 aaPredicted RBP19.52■□□□□ 0.72
SIK3-211ENST00000485363 TTC39AQ5SRH9 613 aa19.52■□□□□ 0.72
SIK3-211ENST00000485363 TBC1D9Q6ZT07 1266 aa19.52■□□□□ 0.72
SIK3-211ENST00000485363 ZSCAN29Q8IWY8 852 aaPredicted RBP19.52■□□□□ 0.72
SIK3-211ENST00000485363 PANK1Q8TE04 598 aa19.52■□□□□ 0.72
SIK3-211ENST00000485363 NSUN4Q96CB9 384 aaKnown RBP19.52■□□□□ 0.72
SIK3-211ENST00000485363 ZFYVE28Q9HCC9 887 aa19.52■□□□□ 0.72
SIK3-211ENST00000485363 SP3Q02447 781 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms