RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 CNKSR2Q8WXI2 1034 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 RABGGTAQ92696 567 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 SEC62Q99442 399 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 DSCC1Q9BVC3 393 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 SUGCTQ9HAC7 445 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 FER1L4A9Z1Z3 1794 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 A0A1W2PQ27 194 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 A0A1W2PQ64 194 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 A0A1W2PQD8 194 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 SOCS7O14512 581 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 BIRC2Q13490 618 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 DHX8Q14562 1220 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 FSIP1Q8NA03 581 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 EIF5P55010 431 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 FMR1NBQ8N0W7 255 aaPredicted RBP13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 ERCC4Q92889 916 aaPredicted RBP13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 ZSWIM4Q9H7M6 989 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 HELLSQ9NRZ9 838 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 ARFGEF2Q9Y6D5 1785 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 TRDNQ13061 729 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 FBXL16Q8N461 479 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 MRPS27Q92552 414 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 ZNF274Q96GC6 653 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 MYD88Q99836 296 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 LRRC2Q9BYS8 371 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 IFNKQ9P0W0 207 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 TXLNAP40222 546 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 BEND6Q5SZJ8 279 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 DBNDD2Q9BQY9 259 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 RTEL1Q9NZ71 1219 aa13.25□□□□□ -0.29
SEC61A1-205ENST00000483956 EXOC5O00471 708 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 NRDCO43847 1150 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 ME1P48163 572 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 PSME1Q06323 249 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 BRD3Q15059 726 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 ADALQ6DHV7 355 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 LRP10Q7Z4F1 713 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 GOLGA1Q92805 767 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 CLIC6Q96NY7 704 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 WDR24Q96S15 920 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 CARMIL3Q8ND23 1372 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 GCP02774 474 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 HDXQ7Z353 690 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 MRFAP1Q9Y605 127 aa13.24□□□□□ -0.29
SEC61A1-205ENST00000483956 CHGBP05060 677 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 DDX46Q7L014 1031 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 COPS6Q7L5N1 327 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 FAM204AQ9H8W3 233 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 NDUFB9Q9Y6M9 179 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 ADAMTSL3P82987 1691 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 EIF3JO75822 258 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 JAKMIP3Q5VZ66 844 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 GBP6Q6ZN66 633 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 GIMAP7Q8NHV1 300 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 PCDHA7Q9UN72 937 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 KDM6AO15550 1401 aaPredicted RBP13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 VWA3AA6NCI4 1184 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 CCP110O43303 1012 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 PDIA3P30101 505 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 USP8P40818 1118 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 SEMA3FQ13275 785 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 ZMYM1Q5SVZ6 1142 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 MIEF2Q96C03 454 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 FAXDC2Q96IV6 333 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 UTP14AQ9BVJ6 771 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 SLC24A3Q9HC58 644 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 NEDD4P46934 1319 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
SEC61A1-205ENST00000483956 E7EWF7 191 aa13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 MYL6BP14649 208 aa13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 GNG11P61952 73 aa13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 GNL3LQ9NVN8 582 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 KIAA1468Q9P260 1216 aa13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 KIF1AQ12756 1690 aa13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 MPHOSPH8Q99549 860 aa13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 GPR108Q9NPR9 543 aa13.22□□□□□ -0.29
SEC61A1-205ENST00000483956 C21orf2O43822 256 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 HSP90B2PQ58FF3 399 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 NAIF1Q69YI7 327 aaPredicted RBP13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 TTC19Q6DKK2 380 aaPredicted RBP13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 LINC00301Q8NCQ3 95 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 DHX58Q96C10 678 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 PAG1Q9NWQ8 432 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 YEATS4O95619 227 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 CASP7P55210 303 aa13.21□□□□□ -0.29
SEC61A1-205ENST00000483956 CCT2P78371 535 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms