RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GTF3C6Q969F1 213 aa30.97■■■□□ 2.55
SHOX2-204ENST00000483851 EYA3Q99504 573 aa30.97■■■□□ 2.55
SHOX2-204ENST00000483851 ANAPC4Q9UJX5 808 aa30.97■■■□□ 2.55
SHOX2-204ENST00000483851 WDR33Q9C0J8 1336 aaKnown RBP30.96■■■□□ 2.55
SHOX2-204ENST00000483851 ZC3H12CQ9C0D7 883 aaKnown RBP30.96■■■□□ 2.55
SHOX2-204ENST00000483851 PRC1O43663 620 aa30.95■■■□□ 2.55
SHOX2-204ENST00000483851 PFKFB2O60825 505 aa30.95■■■□□ 2.55
SHOX2-204ENST00000483851 PKP1Q13835 747 aa30.95■■■□□ 2.55
SHOX2-204ENST00000483851 AKNAD1Q5T1N1 836 aa30.95■■■□□ 2.55
SHOX2-204ENST00000483851 STAG1Q8WVM7 1258 aa30.95■■■□□ 2.55
SHOX2-204ENST00000483851 CRNKL1Q9BZJ0 848 aaKnown RBP30.95■■■□□ 2.55
SHOX2-204ENST00000483851 RNF41Q9H4P4 317 aaPredicted RBP30.95■■■□□ 2.55
SHOX2-204ENST00000483851 NECAB1Q8N987 351 aa30.95■■■□□ 2.54
SHOX2-204ENST00000483851 LLPHQ9BRT6 129 aaKnown RBP30.95■■■□□ 2.54
SHOX2-204ENST00000483851 KRT23Q9C075 422 aa30.95■■■□□ 2.54
SHOX2-204ENST00000483851 ATP8A2Q9NTI2 1148 aa30.95■■■□□ 2.54
SHOX2-204ENST00000483851 CC2D2BQ6DHV5 1058 aa30.94■■■□□ 2.54
SHOX2-204ENST00000483851 MTA3Q9BTC8 594 aa30.94■■■□□ 2.54
SHOX2-204ENST00000483851 SUGT1Q9Y2Z0 365 aa30.94■■■□□ 2.54
SHOX2-204ENST00000483851 C10orf71Q711Q0 1435 aa30.94■■■□□ 2.54
SHOX2-204ENST00000483851 PCP11498 1178 aaKnown RBP30.93■■■□□ 2.54
SHOX2-204ENST00000483851 LRRC2Q9BYS8 371 aa30.93■■■□□ 2.54
SHOX2-204ENST00000483851 GOLGA6L22H0YM25 854 aa30.93■■■□□ 2.54
SHOX2-204ENST00000483851 GJB2P29033 226 aa30.93■■■□□ 2.54
SHOX2-204ENST00000483851 DYNLL1P63167 89 aaKnown RBP30.93■■■□□ 2.54
SHOX2-204ENST00000483851 MFSD6Q6ZSS7 791 aa30.93■■■□□ 2.54
SHOX2-204ENST00000483851 TMEM87BQ96K49 555 aa30.93■■■□□ 2.54
SHOX2-204ENST00000483851 BAG4O95429 457 aaKnown RBP30.92■■■□□ 2.54
SHOX2-204ENST00000483851 PDCP20941 246 aa30.92■■■□□ 2.54
SHOX2-204ENST00000483851 ANTXR2P58335 489 aa30.92■■■□□ 2.54
SHOX2-204ENST00000483851 PPP4CP60510 307 aa30.92■■■□□ 2.54
SHOX2-204ENST00000483851 SLF2Q8IX21 1173 aa30.92■■■□□ 2.54
SHOX2-204ENST00000483851 BAG3O95817 575 aa30.91■■■□□ 2.54
SHOX2-204ENST00000483851 SDR42E1Q8WUS8 393 aa30.91■■■□□ 2.54
SHOX2-204ENST00000483851 FSD2A1L4K1 749 aa30.91■■■□□ 2.54
SHOX2-204ENST00000483851 PPARAQ07869 468 aa30.91■■■□□ 2.54
SHOX2-204ENST00000483851 GRIPAP1Q4V328 841 aa30.91■■■□□ 2.54
SHOX2-204ENST00000483851 JAG2Q9Y219 1238 aa30.91■■■□□ 2.54
SHOX2-204ENST00000483851 DLEC1Q9Y238 1755 aa30.9■■■□□ 2.54
SHOX2-204ENST00000483851 APOBRQ0VD83 1088 aa30.9■■■□□ 2.54
SHOX2-204ENST00000483851 FAM163AQ96GL9 167 aaPredicted RBP30.9■■■□□ 2.54
SHOX2-204ENST00000483851 AATFQ9NY61 560 aaKnown RBP eCLIP30.9■■■□□ 2.54
SHOX2-204ENST00000483851 SLX4Q8IY92 1834 aa30.89■■■□□ 2.54
SHOX2-204ENST00000483851 NOL10Q9BSC4 688 aaKnown RBP30.89■■■□□ 2.54
SHOX2-204ENST00000483851 RTFDC1Q9BY42 306 aaPredicted RBP30.89■■■□□ 2.54
SHOX2-204ENST00000483851 STX6O43752 255 aa30.89■■■□□ 2.53
SHOX2-204ENST00000483851 SYT1P21579 422 aa30.89■■■□□ 2.53
SHOX2-204ENST00000483851 CHST3Q7LGC8 479 aa30.89■■■□□ 2.53
SHOX2-204ENST00000483851 ANGEL1Q9UNK9 670 aaKnown RBP30.89■■■□□ 2.53
SHOX2-204ENST00000483851 PDIA3P30101 505 aaKnown RBP30.88■■■□□ 2.53
SHOX2-204ENST00000483851 SKOR2Q2VWA4 1001 aaPredicted RBP30.88■■■□□ 2.53
SHOX2-204ENST00000483851 MFSD14BQ5SR56 506 aa30.88■■■□□ 2.53
SHOX2-204ENST00000483851 MROH7-TTC4A0A0A0MT08 1334 aa30.88■■■□□ 2.53
SHOX2-204ENST00000483851 NEDD4P46934 1319 aa30.88■■■□□ 2.53
SHOX2-204ENST00000483851 CTDSPL2Q05D32 466 aa30.87■■■□□ 2.53
SHOX2-204ENST00000483851 STK3Q13188 491 aa30.87■■■□□ 2.53
SHOX2-204ENST00000483851 C7orf43Q8WVR3 580 aa30.87■■■□□ 2.53
SHOX2-204ENST00000483851 B4E1Z4 1266 aa30.87■■■□□ 2.53
SHOX2-204ENST00000483851 CHRNA5P30532 468 aa30.87■■■□□ 2.53
SHOX2-204ENST00000483851 NT5C2P49902 561 aa30.87■■■□□ 2.53
SHOX2-204ENST00000483851 SCRN1Q12765 414 aa30.87■■■□□ 2.53
SHOX2-204ENST00000483851 SBK1Q52WX2 424 aa30.87■■■□□ 2.53
SHOX2-204ENST00000483851 PDGFDQ9GZP0 370 aaPredicted RBP30.87■■■□□ 2.53
SHOX2-204ENST00000483851 ARPP21Q9UBL0 812 aaPredicted RBP30.87■■■□□ 2.53
SHOX2-204ENST00000483851 MYH2Q9UKX2 1941 aa30.87■■■□□ 2.53
SHOX2-204ENST00000483851 RIMBP2O15034 1052 aa30.86■■■□□ 2.53
SHOX2-204ENST00000483851 PODNQ7Z5L7 613 aa30.86■■■□□ 2.53
SHOX2-204ENST00000483851 DCP1AQ9NPI6 582 aaPredicted RBP30.86■■■□□ 2.53
SHOX2-204ENST00000483851 FGRP09769 529 aa30.85■■■□□ 2.53
SHOX2-204ENST00000483851 ZSCAN22P10073 491 aaPredicted RBP30.85■■■□□ 2.53
SHOX2-204ENST00000483851 CYB5R4Q7L1T6 521 aa30.85■■■□□ 2.53
SHOX2-204ENST00000483851 SMARCC2Q8TAQ2 1214 aa30.85■■■□□ 2.53
SHOX2-204ENST00000483851 SH2B2O14492 632 aaPredicted RBP30.84■■■□□ 2.53
SHOX2-204ENST00000483851 DHX16O60231 1041 aaKnown RBP30.84■■■□□ 2.53
SHOX2-204ENST00000483851 PLCG2P16885 1265 aa30.84■■■□□ 2.53
SHOX2-204ENST00000483851 LIFRP42702 1097 aa30.84■■■□□ 2.53
SHOX2-204ENST00000483851 HMGN5P82970 282 aaKnown RBP30.84■■■□□ 2.53
SHOX2-204ENST00000483851 OLFM4Q6UX06 510 aa30.84■■■□□ 2.53
SHOX2-204ENST00000483851 KIF13BQ9NQT8 1826 aa30.84■■■□□ 2.53
SHOX2-204ENST00000483851 BAZ2AQ9UIF9 1905 aaKnown RBP30.84■■■□□ 2.53
SHOX2-204ENST00000483851 L1TD1Q5T7N2 865 aaKnown RBP30.84■■■□□ 2.53
SHOX2-204ENST00000483851 CTR9Q6PD62 1173 aa30.84■■■□□ 2.53
SHOX2-204ENST00000483851 KIF3AQ9Y496 699 aa30.84■■■□□ 2.53
SHOX2-204ENST00000483851 LAMB1P07942 1786 aa30.84■■■□□ 2.53
SHOX2-204ENST00000483851 GPR75-ASB3A0A0A6YYF3 556 aa30.83■■■□□ 2.53
SHOX2-204ENST00000483851 MINDY4BA8MYZ0 360 aa30.83■■■□□ 2.53
SHOX2-204ENST00000483851 GTF2IP78347 998 aa30.83■■■□□ 2.53
SHOX2-204ENST00000483851 GRIK5Q16478 980 aa30.83■■■□□ 2.53
SHOX2-204ENST00000483851 SGMS1Q86VZ5 419 aa30.83■■■□□ 2.53
SHOX2-204ENST00000483851 SUPT20HQ8NEM7 779 aa30.83■■■□□ 2.53
SHOX2-204ENST00000483851 ZSWIM5Q9P217 1185 aa30.83■■■□□ 2.53
SHOX2-204ENST00000483851 ATP6V1DQ9Y5K8 247 aa30.83■■■□□ 2.53
SHOX2-204ENST00000483851 GAKO14976 1311 aa30.83■■■□□ 2.53
SHOX2-204ENST00000483851 SART3Q15020 963 aaKnown RBP30.82■■■□□ 2.53
SHOX2-204ENST00000483851 IGDCC4Q8TDY8 1250 aa30.82■■■□□ 2.53
SHOX2-204ENST00000483851 BRPF3Q9ULD4 1205 aa30.82■■■□□ 2.53
SHOX2-204ENST00000483851 SNED1Q8TER0 1413 aa30.82■■■□□ 2.52
SHOX2-204ENST00000483851 G3V3G9 751 aa30.82■■■□□ 2.52
SHOX2-204ENST00000483851 KDM4AO75164 1064 aa30.82■■■□□ 2.52
SHOX2-204ENST00000483851 SLC3A2P08195 630 aaKnown RBP30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms