RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 ALDH1A1P00352 501 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 ZBTB48P10074 688 aaPredicted RBP13.78□□□□□ -0.2
SORT1-204ENST00000482236 RLBP1P12271 317 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 ATP8B2P98198 1209 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 PICALMQ13492 652 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 SPATA5Q8NB90 893 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 ABHD8Q96I13 439 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 SALL1Q9NSC2 1324 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 SSC5DA1L4H1 1573 aa13.78□□□□□ -0.2
SORT1-204ENST00000482236 LDHCP07864 332 aa13.77□□□□□ -0.21
SORT1-204ENST00000482236 MAP3K9P80192 1104 aa13.77□□□□□ -0.21
SORT1-204ENST00000482236 HSP90AB4PQ58FF6 505 aa13.77□□□□□ -0.21
SORT1-204ENST00000482236 LDLRAD1Q5T700 205 aa13.77□□□□□ -0.21
SORT1-204ENST00000482236 APOBEC3HQ6NTF7 200 aaKnown RBP13.77□□□□□ -0.21
SORT1-204ENST00000482236 FAM83AQ86UY5 434 aa13.77□□□□□ -0.21
SORT1-204ENST00000482236 ERC1Q8IUD2 1116 aa13.77□□□□□ -0.21
SORT1-204ENST00000482236 OPTNQ96CV9 577 aa13.77□□□□□ -0.21
SORT1-204ENST00000482236 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.21
SORT1-204ENST00000482236 MRIQ9BWK5 157 aa13.77□□□□□ -0.21
SORT1-204ENST00000482236 ZNF341Q9BYN7 854 aa13.77□□□□□ -0.21
SORT1-204ENST00000482236 UNCXA6NJT0 531 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 USP2O75604 605 aaPredicted RBP13.76□□□□□ -0.21
SORT1-204ENST00000482236 BTDP43251 543 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 INHBEP58166 350 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 MAP3K11Q16584 847 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 TNNI3KQ59H18 835 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 CDC42EP5Q6NZY7 148 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 MIGA2Q7L4E1 593 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 MCOLN1Q9GZU1 580 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 COG6Q9Y2V7 657 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 FPGT-TNNI3KV9GXZ4 949 aa13.76□□□□□ -0.21
SORT1-204ENST00000482236 PDS5AQ29RF7 1337 aaKnown RBP13.75□□□□□ -0.21
SORT1-204ENST00000482236 ZBTB7BO15156 539 aaPredicted RBP13.75□□□□□ -0.21
SORT1-204ENST00000482236 VGLL4Q14135 290 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 POLA2Q14181 598 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 FKBP1CQ5VVH2 108 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 CDAN1Q8IWY9 1227 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 SSH3Q8TE77 659 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 FAM151AQ8WW52 585 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 TRIM34Q9BYJ4 488 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 SNRKQ9NRH2 765 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 HMG20BQ9P0W2 317 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
SORT1-204ENST00000482236 AKAP11Q9UKA4 1901 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 RPAP1Q9BWH6 1393 aaPredicted RBP13.74□□□□□ -0.21
SORT1-204ENST00000482236 MROH7-TTC4A0A0A0MT08 1334 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 RGS3P49796 1198 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 GTF2A2P52657 109 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 MECOMQ03112 1051 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 CEP85Q6P2H3 762 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 TBC1D9Q6ZT07 1266 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 CTU1Q7Z7A3 348 aaKnown RBP13.74□□□□□ -0.21
SORT1-204ENST00000482236 AACSQ86V21 672 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 IFNL1Q8IU54 200 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 TEPSINQ96N21 525 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 DBNDD2Q9BQY9 259 aa13.74□□□□□ -0.21
SORT1-204ENST00000482236 CCL15-CCL14A0A0B4J2E2 113 aa13.73□□□□□ -0.21
SORT1-204ENST00000482236 BAG3O95817 575 aa13.73□□□□□ -0.21
SORT1-204ENST00000482236 ARID4AP29374 1257 aaPredicted RBP13.73□□□□□ -0.21
SORT1-204ENST00000482236 TM4SF4P48230 202 aa13.73□□□□□ -0.21
SORT1-204ENST00000482236 NFIAQ12857 509 aa13.73□□□□□ -0.21
SORT1-204ENST00000482236 CCL15Q16663 113 aa13.73□□□□□ -0.21
SORT1-204ENST00000482236 NAA16Q6N069 864 aaPredicted RBP13.73□□□□□ -0.21
SORT1-204ENST00000482236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.73□□□□□ -0.21
SORT1-204ENST00000482236 CCDC8Q9H0W5 538 aaPredicted RBP13.73□□□□□ -0.21
SORT1-204ENST00000482236 GPR108Q9NPR9 543 aa13.73□□□□□ -0.21
SORT1-204ENST00000482236 PICK1Q9NRD5 415 aa13.73□□□□□ -0.21
SORT1-204ENST00000482236 GPR25O00155 361 aa13.72□□□□□ -0.21
SORT1-204ENST00000482236 FKTNO75072 461 aa13.72□□□□□ -0.21
SORT1-204ENST00000482236 IFIT2P09913 472 aaKnown RBP13.72□□□□□ -0.21
SORT1-204ENST00000482236 MCAMP43121 646 aa13.72□□□□□ -0.21
SORT1-204ENST00000482236 ERO1BQ86YB8 467 aa13.72□□□□□ -0.21
SORT1-204ENST00000482236 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
SORT1-204ENST00000482236 ZNF296Q8WUU4 475 aaPredicted RBP13.72□□□□□ -0.21
SORT1-204ENST00000482236 ZKSCAN4Q969J2 545 aaPredicted RBP13.72□□□□□ -0.21
SORT1-204ENST00000482236 ENTPD3O75355 529 aa13.71□□□□□ -0.21
SORT1-204ENST00000482236 IDH1O75874 414 aaKnown RBP13.71□□□□□ -0.21
SORT1-204ENST00000482236 CETPP11597 493 aa13.71□□□□□ -0.21
SORT1-204ENST00000482236 SNAPC2Q13487 334 aa13.71□□□□□ -0.21
SORT1-204ENST00000482236 TAF1CQ15572 869 aaPredicted RBP13.71□□□□□ -0.21
SORT1-204ENST00000482236 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.71□□□□□ -0.21
SORT1-204ENST00000482236 CLASRPQ8N2M8 674 aaKnown RBP13.71□□□□□ -0.21
SORT1-204ENST00000482236 IL1RAPL2Q9NP60 686 aa13.71□□□□□ -0.21
SORT1-204ENST00000482236 GAKO14976 1311 aa13.7□□□□□ -0.22
SORT1-204ENST00000482236 PLCG2P16885 1265 aa13.7□□□□□ -0.22
SORT1-204ENST00000482236 RPAP2Q8IXW5 612 aaPredicted RBP13.7□□□□□ -0.22
SORT1-204ENST00000482236 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
SORT1-204ENST00000482236 ZFYVE28Q9HCC9 887 aa13.7□□□□□ -0.22
SORT1-204ENST00000482236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.7□□□□□ -0.22
SORT1-204ENST00000482236 CASP8AP2Q9UKL3 1982 aa13.7□□□□□ -0.22
SORT1-204ENST00000482236 AK9Q5TCS8 1911 aa13.7□□□□□ -0.22
SORT1-204ENST00000482236 SPDYE5A6NIY4 337 aa13.69□□□□□ -0.22
SORT1-204ENST00000482236 IGF2BP3O00425 579 aaKnown RBP eCLIP13.69□□□□□ -0.22
SORT1-204ENST00000482236 INPP5BP32019 993 aa13.69□□□□□ -0.22
SORT1-204ENST00000482236 GJA5P36382 358 aa13.69□□□□□ -0.22
SORT1-204ENST00000482236 ARHGEF6Q15052 776 aa13.69□□□□□ -0.22
SORT1-204ENST00000482236 CRACR2BQ8N4Y2 399 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms