RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 TCHHQ07283 1943 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 PDCP20941 246 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 GPSM2P81274 684 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 CTDSPL2Q05D32 466 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 DDX11Q96FC9 970 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 NACAP1Q9BZK3 213 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 GDPD2Q9HCC8 539 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 NCOA5Q9HCD5 579 aaKnown RBP17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 NEDD4P46934 1319 aa17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 PDS5AQ29RF7 1337 aaKnown RBP17.16■□□□□ 0.34
PKNOX1-206ENST00000480179 PDIA3P30101 505 aaKnown RBP17.15■□□□□ 0.34
PKNOX1-206ENST00000480179 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
PKNOX1-206ENST00000480179 CNPY2Q9Y2B0 182 aa17.15■□□□□ 0.34
PKNOX1-206ENST00000480179 LEMD3Q9Y2U8 911 aa17.15■□□□□ 0.34
PKNOX1-206ENST00000480179 WDR19Q8NEZ3 1342 aa17.14■□□□□ 0.33
PKNOX1-206ENST00000480179 B4E1Z4 1266 aa17.14■□□□□ 0.33
PKNOX1-206ENST00000480179 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
PKNOX1-206ENST00000480179 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.33
PKNOX1-206ENST00000480179 GPT2Q8TD30 523 aa17.14■□□□□ 0.33
PKNOX1-206ENST00000480179 CCDC88AQ3V6T2 1871 aa17.14■□□□□ 0.33
PKNOX1-206ENST00000480179 KLF18A0A0U1RQI7 1052 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 GOLGA8BA8MQT2 603 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 UFL1O94874 794 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 NSUN7Q8NE18 718 aaKnown RBP17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 ZNF274Q96GC6 653 aaPredicted RBP17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 LLPHQ9BRT6 129 aaKnown RBP17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 INCENPQ9NQS7 918 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 ATP6V1DQ9Y5K8 247 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 NRXN2Q9P2S2 1712 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 PTPDC1A2A3K4 754 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 FOSBP53539 338 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 MECOMQ03112 1051 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 CAVIN1Q6NZI2 390 aaKnown RBP17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 FERMT3Q86UX7 667 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 RAB11FIP4Q86YS3 637 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 FBXL16Q8N461 479 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 SDR42E1Q8WUS8 393 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
PKNOX1-206ENST00000480179 LRRC37AA6NMS7 1700 aa17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 ARHGAP27Q6ZUM4 889 aa17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 ZNF804AQ7Z570 1209 aa17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 FAM184AQ8NB25 1140 aa17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 SMARCC2Q8TAQ2 1214 aa17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 NSUN4Q96CB9 384 aaKnown RBP17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 RIOK1Q9BRS2 568 aaKnown RBP17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 NSFL1CQ9UNZ2 370 aaKnown RBP17.12■□□□□ 0.33
PKNOX1-206ENST00000480179 GOLGA6L3A6NEY3 463 aa17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 FIBPO43427 364 aa17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 PRDX5P30044 214 aa17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 USP48Q86UV5 1035 aa17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 RBM27Q9P2N5 1060 aaKnown RBP17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 COL11A2P13942 1736 aaPredicted RBP17.11■□□□□ 0.33
PKNOX1-206ENST00000480179 SH2B2O14492 632 aaPredicted RBP17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 DPEP1P16444 411 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 EVCP57679 992 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 DNM1Q05193 864 aaKnown RBP17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 AKNAD1Q5T1N1 836 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 CRAMP1Q96RY5 1269 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 TOMM22Q9NS69 142 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 H3BQV1 296 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 GADD45BO75293 160 aaPredicted RBP17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 BBOX1O75936 387 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 MBD3O95983 291 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 PDIA4P13667 645 aaKnown RBP17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 HSPA6P17066 643 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 ATP2B4P23634 1241 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 HMGN5P82970 282 aaKnown RBP17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 IFFO2Q5TF58 517 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 MFSD6Q6ZSS7 791 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 DZIP1Q86YF9 867 aaKnown RBP17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 ANGEL1Q9UNK9 670 aaKnown RBP17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 HPS5Q9UPZ3 1129 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 C10orf71Q711Q0 1435 aa17.1■□□□□ 0.33
PKNOX1-206ENST00000480179 KIAA1551Q9HCM1 1747 aa17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 PPEF1O14829 653 aaPredicted RBP17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 KDM4AO75164 1064 aa17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 PPARAQ07869 468 aa17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 TMEM87AQ8NBN3 555 aa17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 TDRD7Q8NHU6 1098 aaKnown RBP17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 CNNM2Q9H8M5 875 aa17.09■□□□□ 0.33
PKNOX1-206ENST00000480179 LTBP1Q14766 1721 aa17.08■□□□□ 0.33
PKNOX1-206ENST00000480179 FSD2A1L4K1 749 aa17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 TPRNQ4KMQ1 711 aa17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 L1TD1Q5T7N2 865 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms