RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.57■□□□□ 0.56
PRKN-207ENST00000479615 FAM163AQ96GL9 167 aaPredicted RBP18.57■□□□□ 0.56
PRKN-207ENST00000479615 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
PRKN-207ENST00000479615 TESPA1A2RU30 521 aaPredicted RBP18.56■□□□□ 0.56
PRKN-207ENST00000479615 ZBTB7BO15156 539 aaPredicted RBP18.56■□□□□ 0.56
PRKN-207ENST00000479615 TBC1D8O95759 1140 aa18.56■□□□□ 0.56
PRKN-207ENST00000479615 UQCRFS1P1P0C7P4 283 aa18.56■□□□□ 0.56
PRKN-207ENST00000479615 DZIP1Q86YF9 867 aaKnown RBP18.56■□□□□ 0.56
PRKN-207ENST00000479615 GPR25O00155 361 aa18.55■□□□□ 0.56
PRKN-207ENST00000479615 MAP4K4O95819 1239 aaPredicted RBP18.55■□□□□ 0.56
PRKN-207ENST00000479615 CACNB3P54284 484 aa18.55■□□□□ 0.56
PRKN-207ENST00000479615 CDC42EP5Q6NZY7 148 aa18.55■□□□□ 0.56
PRKN-207ENST00000479615 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.55■□□□□ 0.56
PRKN-207ENST00000479615 OPTNQ96CV9 577 aa18.55■□□□□ 0.56
PRKN-207ENST00000479615 CHMP4BQ9H444 224 aaKnown RBP18.55■□□□□ 0.56
PRKN-207ENST00000479615 USP40Q9NVE5 1235 aa18.55■□□□□ 0.56
PRKN-207ENST00000479615 ABCF2Q9UG63 623 aa18.55■□□□□ 0.56
PRKN-207ENST00000479615 CCDC85CA6NKD9 419 aa18.54■□□□□ 0.56
PRKN-207ENST00000479615 GTF2A2P52657 109 aa18.54■□□□□ 0.56
PRKN-207ENST00000479615 GSTO1P78417 241 aa18.54■□□□□ 0.56
PRKN-207ENST00000479615 OS9Q13438 667 aaPredicted RBP18.54■□□□□ 0.56
PRKN-207ENST00000479615 VGLL4Q14135 290 aa18.54■□□□□ 0.56
PRKN-207ENST00000479615 DIXDC1Q155Q3 683 aa18.54■□□□□ 0.56
PRKN-207ENST00000479615 ERICH6Q7L0X2 663 aa18.54■□□□□ 0.56
PRKN-207ENST00000479615 ZNF296Q8WUU4 475 aaPredicted RBP18.54■□□□□ 0.56
PRKN-207ENST00000479615 ZNF341Q9BYN7 854 aa18.54■□□□□ 0.56
PRKN-207ENST00000479615 ELP3Q9H9T3 547 aa18.54■□□□□ 0.56
PRKN-207ENST00000479615 NOP58Q9Y2X3 529 aaKnown RBP18.54■□□□□ 0.56
PRKN-207ENST00000479615 CASP8AP2Q9UKL3 1982 aa18.53■□□□□ 0.56
PRKN-207ENST00000479615 GAKO14976 1311 aa18.53■□□□□ 0.56
PRKN-207ENST00000479615 FKTNO75072 461 aa18.53■□□□□ 0.56
PRKN-207ENST00000479615 SURF6O75683 361 aaKnown RBP18.53■□□□□ 0.56
PRKN-207ENST00000479615 WDHD1O75717 1129 aaPredicted RBP18.53■□□□□ 0.56
PRKN-207ENST00000479615 LDHCP07864 332 aa18.53■□□□□ 0.56
PRKN-207ENST00000479615 ARID4AP29374 1257 aaPredicted RBP18.53■□□□□ 0.56
PRKN-207ENST00000479615 CCDC158Q5M9N0 1113 aa18.53■□□□□ 0.56
PRKN-207ENST00000479615 ERO1BQ86YB8 467 aa18.53■□□□□ 0.56
PRKN-207ENST00000479615 SPATA5Q8NB90 893 aa18.53■□□□□ 0.56
PRKN-207ENST00000479615 IDI2Q9BXS1 227 aa18.53■□□□□ 0.56
PRKN-207ENST00000479615 SPDYE5A6NIY4 337 aa18.52■□□□□ 0.56
PRKN-207ENST00000479615 ENTPD3O75355 529 aa18.52■□□□□ 0.56
PRKN-207ENST00000479615 CDAN1Q8IWY9 1227 aa18.52■□□□□ 0.56
PRKN-207ENST00000479615 WRNIP1Q96S55 665 aa18.52■□□□□ 0.56
PRKN-207ENST00000479615 HMG20BQ9P0W2 317 aa18.52■□□□□ 0.56
PRKN-207ENST00000479615 RLBP1P12271 317 aa18.51■□□□□ 0.55
PRKN-207ENST00000479615 ZNF512BQ96KM6 892 aaPredicted RBP18.51■□□□□ 0.55
PRKN-207ENST00000479615 ZCCHC17Q9NP64 241 aaKnown RBP18.51■□□□□ 0.55
PRKN-207ENST00000479615 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.51■□□□□ 0.55
PRKN-207ENST00000479615 IGF2BP3O00425 579 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRKN-207ENST00000479615 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
PRKN-207ENST00000479615 GJA5P36382 358 aa18.5■□□□□ 0.55
PRKN-207ENST00000479615 HSP90AB4PQ58FF6 505 aa18.5■□□□□ 0.55
PRKN-207ENST00000479615 TNNI3KQ59H18 835 aa18.5■□□□□ 0.55
PRKN-207ENST00000479615 ERC1Q8IUD2 1116 aa18.5■□□□□ 0.55
PRKN-207ENST00000479615 MS4A4AQ96JQ5 239 aa18.5■□□□□ 0.55
PRKN-207ENST00000479615 ZNF112Q9UJU3 913 aa18.5■□□□□ 0.55
PRKN-207ENST00000479615 FPGT-TNNI3KV9GXZ4 949 aa18.5■□□□□ 0.55
PRKN-207ENST00000479615 MROH7-TTC4A0A0A0MT08 1334 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 MYH13Q9UKX3 1938 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 GPR75-ASB3A0A0A6YYF3 556 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 CETPP11597 493 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 RGS19P49795 217 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 MECOMQ03112 1051 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 PPATQ06203 517 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 TCP10Q12799 353 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 NFIAQ12857 509 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 SNAPC2Q13487 334 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 OTUD5Q96G74 571 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 FAM198AQ9UFP1 575 aa18.49■□□□□ 0.55
PRKN-207ENST00000479615 BTDP43251 543 aa18.48■□□□□ 0.55
PRKN-207ENST00000479615 PPIL2Q13356 520 aa18.48■□□□□ 0.55
PRKN-207ENST00000479615 ARHGEF6Q15052 776 aa18.48■□□□□ 0.55
PRKN-207ENST00000479615 TTC39AQ5SRH9 613 aa18.48■□□□□ 0.55
PRKN-207ENST00000479615 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
PRKN-207ENST00000479615 SNCAIPQ9Y6H5 919 aa18.48■□□□□ 0.55
PRKN-207ENST00000479615 CCL15-CCL14A0A0B4J2E2 113 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 CCL15Q16663 113 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 NOL9Q5SY16 702 aaKnown RBP18.47■□□□□ 0.55
PRKN-207ENST00000479615 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 MIGA2Q7L4E1 593 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 ZKSCAN4Q969J2 545 aaPredicted RBP18.47■□□□□ 0.55
PRKN-207ENST00000479615 NSUN4Q96CB9 384 aaKnown RBP18.47■□□□□ 0.55
PRKN-207ENST00000479615 ERO1AQ96HE7 468 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 PTPN18Q99952 460 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 NOL10Q9BSC4 688 aaKnown RBP18.47■□□□□ 0.55
PRKN-207ENST00000479615 C1orf115Q9H7X2 142 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 ZFYVE28Q9HCC9 887 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 RAI14Q9P0K7 980 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 LRP2BPQ9P2M1 347 aa18.47■□□□□ 0.55
PRKN-207ENST00000479615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.47■□□□□ 0.55
PRKN-207ENST00000479615 MCAMP43121 646 aa18.46■□□□□ 0.55
PRKN-207ENST00000479615 RGS3P49796 1198 aa18.46■□□□□ 0.55
PRKN-207ENST00000479615 MAP3K10Q02779 954 aa18.46■□□□□ 0.55
PRKN-207ENST00000479615 FBXO46Q6PJ61 603 aaPredicted RBP18.46■□□□□ 0.55
PRKN-207ENST00000479615 TMED8Q6PL24 325 aaPredicted RBP18.46■□□□□ 0.55
PRKN-207ENST00000479615 ZSCAN29Q8IWY8 852 aaPredicted RBP18.46■□□□□ 0.55
PRKN-207ENST00000479615 RPAP2Q8IXW5 612 aaPredicted RBP18.46■□□□□ 0.55
PRKN-207ENST00000479615 HMMRO75330 724 aa18.45■□□□□ 0.54
PRKN-207ENST00000479615 BAG3O95817 575 aa18.45■□□□□ 0.54
PRKN-207ENST00000479615 PLCG2P16885 1265 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms