RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 CALM1P0DP23 149 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 CALM2P0DP24 149 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 CALM3P0DP25 149 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 STX17P56962 302 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 TMCO5AQ8N6Q1 288 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 CTTNBP2NLQ9P2B4 639 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 PTPROQ16827 1216 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 ANKIB1Q9P2G1 1089 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 SLC12A7Q9Y666 1083 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 S100BP04271 92 aaPredicted RBP12.26□□□□□ -0.45
EWSR1-216ENST00000479135 SLC8A1P32418 973 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 RASSF2P50749 326 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 AFAP1Q8N556 730 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 TRIM37O94972 964 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 GNAI2P04899 355 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 RCN2Q14257 317 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 B4GALNT4Q76KP1 1039 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 PKD2L1Q9P0L9 805 aa12.26□□□□□ -0.45
EWSR1-216ENST00000479135 SKILP12757 684 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 MRPS15P82914 257 aaKnown RBP12.25□□□□□ -0.45
EWSR1-216ENST00000479135 CCDC102BQ68D86 513 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 MCUQ8NE86 351 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 FAM71BQ8TC56 605 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 RAB34Q9BZG1 259 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
EWSR1-216ENST00000479135 DYDC2Q96IM9 177 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 DACH2Q96NX9 599 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 LRRD1A4D1F6 860 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 GOLGA6CA6NDK9 693 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 GOLGA6DP0CG33 693 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 GSDMDP57764 484 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 MYLK4Q86YV6 388 aaPredicted RBP12.25□□□□□ -0.45
EWSR1-216ENST00000479135 GOLGA6AQ9NYA3 693 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 CAPN11Q9UMQ6 739 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 PLIN5Q00G26 463 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 SZRD1Q7Z422 152 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 OTULINQ96BN8 352 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 HDAC11Q96DB2 347 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 PAWRQ96IZ0 340 aaKnown RBP12.25□□□□□ -0.45
EWSR1-216ENST00000479135 NEUROG2Q9H2A3 272 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 SEL1L2Q5TEA6 688 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 OPTNQ96CV9 577 aa12.25□□□□□ -0.45
EWSR1-216ENST00000479135 NBPF26B4DH59 902 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 ABL1P00519 1130 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 CCT6AP40227 531 aaKnown RBP12.24□□□□□ -0.45
EWSR1-216ENST00000479135 ITKQ08881 620 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 NBPF14Q5TI25 921 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 NBPF15Q8N660 670 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 RPS6KC1Q96S38 1066 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 KIF9Q9HAQ2 790 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 RLBP1P12271 317 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 HAUS1Q96CS2 278 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 TSGA10Q9BZW7 698 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 TCP11L1Q9NUJ3 509 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 INPP5FQ9Y2H2 1132 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 H3BRJ5 948 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 NVLO15381 856 aaKnown RBP12.24□□□□□ -0.45
EWSR1-216ENST00000479135 ANO6Q4KMQ2 910 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 TRIM59Q8IWR1 403 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 SMAP1Q8IYB5 467 aaPredicted RBP12.24□□□□□ -0.45
EWSR1-216ENST00000479135 TRIM56Q9BRZ2 755 aaKnown RBP12.24□□□□□ -0.45
EWSR1-216ENST00000479135 VCAM1P19320 739 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 RAD51AP2Q09MP3 1159 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 CFAP70Q5T0N1 1121 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 TEX9Q8N6V9 391 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 PRPF38AQ8NAV1 312 aaKnown RBP12.24□□□□□ -0.45
EWSR1-216ENST00000479135 NAP1L4Q99733 375 aaKnown RBP12.24□□□□□ -0.45
EWSR1-216ENST00000479135 CCDC94Q9BW85 323 aaPredicted RBP12.24□□□□□ -0.45
EWSR1-216ENST00000479135 RAB11FIP3O75154 756 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 SKIP12755 728 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 SPC25Q9HBM1 224 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 AKAP2Q9Y2D5 859 aa12.24□□□□□ -0.45
EWSR1-216ENST00000479135 SYT1P21579 422 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 LIG3P49916 1009 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 UBXN1Q04323 297 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 UHMK1Q8TAS1 419 aaKnown RBP12.23□□□□□ -0.45
EWSR1-216ENST00000479135 SUCLA2Q9P2R7 463 aaPredicted RBP12.23□□□□□ -0.45
EWSR1-216ENST00000479135 ORC4O43929 436 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 RHOBTB1O94844 696 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 HCLS1P14317 486 aaPredicted RBP12.23□□□□□ -0.45
EWSR1-216ENST00000479135 ANKRD20A3Q5VUR7 823 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 ANGPTL8Q6UXH0 198 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 BTN2A1Q7KYR7 527 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 KLHL7Q8IXQ5 586 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 CABS1Q96KC9 395 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 G3BP2Q9UN86 482 aaKnown RBP12.23□□□□□ -0.45
EWSR1-216ENST00000479135 SUPT3HO75486 399 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 WDHD1O75717 1129 aaPredicted RBP12.23□□□□□ -0.45
EWSR1-216ENST00000479135 IFRD2Q12894 506 aaPredicted RBP12.23□□□□□ -0.45
EWSR1-216ENST00000479135 PLCB4Q15147 1175 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 NBPF20Q3BBV1 942 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 HDDC2Q7Z4H3 204 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 CNTLNQ9NXG0 1405 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 TBL3Q12788 808 aaKnown RBP12.23□□□□□ -0.45
EWSR1-216ENST00000479135 HABP4Q5JVS0 413 aaKnown RBP12.23□□□□□ -0.45
EWSR1-216ENST00000479135 ZSCAN25Q6NSZ9 544 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 ANGPTL3Q9Y5C1 460 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 ZNF654Q8IZM8 581 aa12.23□□□□□ -0.45
EWSR1-216ENST00000479135 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms