RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ZNF341Q9BYN7 854 aa21.68■■□□□ 1.06
VIM-204ENST00000478746 BIN2Q9UBW5 565 aaPredicted RBP21.68■■□□□ 1.06
VIM-204ENST00000478746 GJB1P08034 283 aa21.67■■□□□ 1.06
VIM-204ENST00000478746 CCL5P13501 91 aa21.67■■□□□ 1.06
VIM-204ENST00000478746 GJA8P48165 433 aa21.67■■□□□ 1.06
VIM-204ENST00000478746 NCBP3Q53F19 620 aaKnown RBP21.67■■□□□ 1.06
VIM-204ENST00000478746 SLC4A10Q6U841 1118 aa21.67■■□□□ 1.06
VIM-204ENST00000478746 INPP5BP32019 993 aa21.66■■□□□ 1.06
VIM-204ENST00000478746 SUCLG2Q96I99 432 aa21.66■■□□□ 1.06
VIM-204ENST00000478746 SRCIN1Q9C0H9 1055 aa21.66■■□□□ 1.06
VIM-204ENST00000478746 RNF208Q9H0X6 261 aa21.66■■□□□ 1.06
VIM-204ENST00000478746 NR2E3Q9Y5X4 410 aa21.66■■□□□ 1.06
VIM-204ENST00000478746 MAST3O60307 1309 aa21.65■■□□□ 1.06
VIM-204ENST00000478746 MYPNQ86TC9 1320 aa21.65■■□□□ 1.06
VIM-204ENST00000478746 UBXN2AP68543 259 aa21.65■■□□□ 1.06
VIM-204ENST00000478746 CCDC184Q52MB2 194 aa21.65■■□□□ 1.06
VIM-204ENST00000478746 METTL24Q5JXM2 366 aa21.65■■□□□ 1.06
VIM-204ENST00000478746 UBE2Q1Q7Z7E8 422 aa21.65■■□□□ 1.06
VIM-204ENST00000478746 WDR63Q8IWG1 891 aa21.65■■□□□ 1.06
VIM-204ENST00000478746 KAZALD1Q96I82 304 aa21.65■■□□□ 1.06
VIM-204ENST00000478746 SUGT1Q9Y2Z0 365 aa21.65■■□□□ 1.06
VIM-204ENST00000478746 RANBP2P49792 3224 aaKnown RBP21.65■■□□□ 1.06
VIM-204ENST00000478746 BCAMP50895 628 aa21.64■■□□□ 1.05
VIM-204ENST00000478746 LRRC24Q50LG9 513 aa21.64■■□□□ 1.05
VIM-204ENST00000478746 HHIPL2Q6UWX4 724 aa21.64■■□□□ 1.05
VIM-204ENST00000478746 KCNH4Q9UQ05 1017 aa21.64■■□□□ 1.05
VIM-204ENST00000478746 SALL2Q9Y467 1007 aaPredicted RBP21.64■■□□□ 1.05
VIM-204ENST00000478746 FAM151AQ8WW52 585 aa21.63■■□□□ 1.05
VIM-204ENST00000478746 ZNF112Q9UJU3 913 aa21.63■■□□□ 1.05
VIM-204ENST00000478746 ADGRA2Q96PE1 1338 aa21.62■■□□□ 1.05
VIM-204ENST00000478746 PDE8BO95263 885 aa21.62■■□□□ 1.05
VIM-204ENST00000478746 SLC17A8Q8NDX2 589 aa21.62■■□□□ 1.05
VIM-204ENST00000478746 PRO3102Q9H379 93 aa21.62■■□□□ 1.05
VIM-204ENST00000478746 RPAP1Q9BWH6 1393 aaPredicted RBP21.61■■□□□ 1.05
VIM-204ENST00000478746 NBPF7P0C2Y1 421 aaPredicted RBP21.61■■□□□ 1.05
VIM-204ENST00000478746 FCGRTP55899 365 aa21.61■■□□□ 1.05
VIM-204ENST00000478746 DLL1O00548 723 aa21.6■■□□□ 1.05
VIM-204ENST00000478746 ZBTB7BO15156 539 aaPredicted RBP21.6■■□□□ 1.05
VIM-204ENST00000478746 PRKCZQ05513 592 aa21.6■■□□□ 1.05
VIM-204ENST00000478746 TCP10Q12799 353 aa21.6■■□□□ 1.05
VIM-204ENST00000478746 MOGSQ13724 837 aa21.6■■□□□ 1.05
VIM-204ENST00000478746 VGLL2Q8N8G2 317 aa21.6■■□□□ 1.05
VIM-204ENST00000478746 SLAIN1Q8ND83 568 aa21.6■■□□□ 1.05
VIM-204ENST00000478746 U2AF1L4Q8WU68 220 aaKnown RBP21.6■■□□□ 1.05
VIM-204ENST00000478746 PARK7Q99497 189 aaKnown RBP21.6■■□□□ 1.05
VIM-204ENST00000478746 BICC1Q9H694 974 aaKnown RBP21.6■■□□□ 1.05
VIM-204ENST00000478746 AK9Q5TCS8 1911 aa21.6■■□□□ 1.05
VIM-204ENST00000478746 FARP2O94887 1054 aaPredicted RBP21.59■■□□□ 1.05
VIM-204ENST00000478746 CXCL11O14625 94 aa21.58■■□□□ 1.05
VIM-204ENST00000478746 SGPL1O95470 568 aa21.58■■□□□ 1.05
VIM-204ENST00000478746 IFIT1P09914 478 aaKnown RBP21.58■■□□□ 1.05
VIM-204ENST00000478746 BCRP11274 1271 aa21.58■■□□□ 1.05
VIM-204ENST00000478746 RABL6Q3YEC7 729 aaPredicted RBP21.58■■□□□ 1.05
VIM-204ENST00000478746 WDR66Q8TBY9 1149 aa21.58■■□□□ 1.05
VIM-204ENST00000478746 UNC93B1Q9H1C4 597 aa21.58■■□□□ 1.05
VIM-204ENST00000478746 GABRQQ9UN88 632 aa21.58■■□□□ 1.05
VIM-204ENST00000478746 UTYO14607 1347 aa21.57■■□□□ 1.04
VIM-204ENST00000478746 CYP2C8P10632 490 aa21.57■■□□□ 1.04
VIM-204ENST00000478746 NOL9Q5SY16 702 aaKnown RBP21.57■■□□□ 1.04
VIM-204ENST00000478746 GPAT2Q6NUI2 795 aa21.57■■□□□ 1.04
VIM-204ENST00000478746 CDC42EP5Q6NZY7 148 aa21.57■■□□□ 1.04
VIM-204ENST00000478746 ADCY3O60266 1144 aa21.56■■□□□ 1.04
VIM-204ENST00000478746 EVI5O60447 810 aa21.56■■□□□ 1.04
VIM-204ENST00000478746 TFRCP02786 760 aaKnown RBP21.56■■□□□ 1.04
VIM-204ENST00000478746 ZEB1P37275 1124 aaPredicted RBP21.56■■□□□ 1.04
VIM-204ENST00000478746 PUM3Q15397 648 aaKnown RBP21.56■■□□□ 1.04
VIM-204ENST00000478746 ANKRD44Q8N8A2 993 aa21.56■■□□□ 1.04
VIM-204ENST00000478746 KIF16BQ96L93 1317 aa21.55■■□□□ 1.04
VIM-204ENST00000478746 A0A1W2PPC1 479 aa21.55■■□□□ 1.04
VIM-204ENST00000478746 FGFR2P21802 821 aa21.55■■□□□ 1.04
VIM-204ENST00000478746 FASTKD5Q7L8L6 764 aaKnown RBP21.55■■□□□ 1.04
VIM-204ENST00000478746 KLHDC4Q8TBB5 520 aa21.55■■□□□ 1.04
VIM-204ENST00000478746 SPINK5Q9NQ38 1064 aaPredicted RBP21.55■■□□□ 1.04
VIM-204ENST00000478746 DAGLAQ9Y4D2 1042 aa21.55■■□□□ 1.04
VIM-204ENST00000478746 CAPN2P17655 700 aa21.54■■□□□ 1.04
VIM-204ENST00000478746 NFIAQ12857 509 aa21.54■■□□□ 1.04
VIM-204ENST00000478746 USP40Q9NVE5 1235 aa21.54■■□□□ 1.04
VIM-204ENST00000478746 FAM198AQ9UFP1 575 aa21.54■■□□□ 1.04
VIM-204ENST00000478746 MGAMO43451 1857 aa21.54■■□□□ 1.04
VIM-204ENST00000478746 ELNP15502 786 aa21.53■■□□□ 1.04
VIM-204ENST00000478746 FLT3LGP49771 235 aa21.53■■□□□ 1.04
VIM-204ENST00000478746 DIXDC1Q155Q3 683 aa21.53■■□□□ 1.04
VIM-204ENST00000478746 ZHX2Q9Y6X8 837 aa21.53■■□□□ 1.04
VIM-204ENST00000478746 INHAP05111 366 aa21.52■■□□□ 1.04
VIM-204ENST00000478746 SLC5A1P13866 664 aa21.52■■□□□ 1.04
VIM-204ENST00000478746 PXYLP1Q8TE99 480 aa21.52■■□□□ 1.04
VIM-204ENST00000478746 DEFB118Q96PH6 123 aa21.52■■□□□ 1.04
VIM-204ENST00000478746 PICK1Q9NRD5 415 aa21.52■■□□□ 1.04
VIM-204ENST00000478746 STAP2Q9UGK3 403 aa21.52■■□□□ 1.04
VIM-204ENST00000478746 A0A0C4DFX4 3053 aa21.52■■□□□ 1.04
VIM-204ENST00000478746 A0A0G2JLL6 359 aaPredicted RBP21.51■■□□□ 1.03
VIM-204ENST00000478746 GADL1Q6ZQY3 521 aa21.51■■□□□ 1.03
VIM-204ENST00000478746 PRRT2Q7Z6L0 340 aaPredicted RBP21.51■■□□□ 1.03
VIM-204ENST00000478746 ZFPM1Q8IX07 1006 aa21.51■■□□□ 1.03
VIM-204ENST00000478746 LPIN2Q92539 896 aa21.51■■□□□ 1.03
VIM-204ENST00000478746 COL6A3P12111 3177 aa21.5■■□□□ 1.03
VIM-204ENST00000478746 PHF20L1A8MW92 1017 aa21.5■■□□□ 1.03
VIM-204ENST00000478746 SOX1O00570 391 aaPredicted RBP21.5■■□□□ 1.03
VIM-204ENST00000478746 TNPO2O14787 897 aaKnown RBP21.5■■□□□ 1.03
VIM-204ENST00000478746 LDHBP07195 334 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms