RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 FKBP5Q13451 457 aaPredicted RBP6.04□□□□□ -1.44
USF3-202ENST00000478658 PASD1Q8IV76 773 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 MAP7D3Q8IWC1 876 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 NUP133Q8WUM0 1156 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 TADA1Q96BN2 335 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 DCDC2Q9UHG0 476 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 PUF60Q9UHX1 559 aaKnown RBP6.04□□□□□ -1.44
USF3-202ENST00000478658 GTF2A1P52655 376 aaPredicted RBP6.04□□□□□ -1.44
USF3-202ENST00000478658 BLVRAP53004 296 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 CLEC16AQ2KHT3 1053 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 RNF207Q6ZRF8 634 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 OR9Q1Q8NGQ5 310 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 TSC1Q92574 1164 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 GRPEL1Q9HAV7 217 aa6.04□□□□□ -1.44
USF3-202ENST00000478658 FRMD3A2A2Y4 597 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 RNF40O75150 1001 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 SRGAP2BP0DMP2 458 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 RAB44Q7Z6P3 723 aaPredicted RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 PHKBQ93100 1093 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 INTS13Q9NVM9 706 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 ZRANB2O95218 330 aaKnown RBP eCLIP6.03□□□□□ -1.44
USF3-202ENST00000478658 EIF2S1P05198 315 aaKnown RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 LMOD1P29536 600 aaPredicted RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 NEK4P51957 841 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 SLMAPQ14BN4 828 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 SEL1L2Q5TEA6 688 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 TEX11Q8IYF3 940 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 GCC1Q96CN9 775 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 SCAND2PQ9GZW5 306 aaPredicted RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 BCL2L12Q9HB09 334 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 UTP6Q9NYH9 597 aaKnown RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 MKL2Q9ULH7 1088 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 OATP04181 439 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 UBL4BQ8N7F7 174 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 DYNC1LI2O43237 492 aaPredicted RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 MAP3K13O43283 966 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 SLFN14P0C7P3 912 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 TNNI2P48788 182 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 ANO6Q4KMQ2 910 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 TDRD12Q587J7 1177 aaKnown RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 ACBD5Q5T8D3 534 aaPredicted RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 NBPF6Q5VWK0 638 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 KRT40Q6A162 431 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 MCUR1Q96AQ8 359 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 NBPF4Q96M43 638 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 IWS1Q96ST2 819 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 NACADO15069 1562 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 CCDC194A0A1B0GVG4 234 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 ZW10O43264 779 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 GLE1Q53GS7 698 aaKnown RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 LRRC8BQ6P9F7 803 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 NUDT18Q6ZVK8 323 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 NUTM1Q86Y26 1132 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 MYLK2Q9H1R3 596 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 MKNK2Q9HBH9 465 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 C6orf50Q9HD87 102 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 EXOC7Q9UPT5 735 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 STX3Q13277 289 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 RFWD2Q8NHY2 731 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 MTRQ99707 1265 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 IFT122Q9HBG6 1241 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 TFIP11Q9UBB9 837 aaKnown RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.03□□□□□ -1.44
USF3-202ENST00000478658 ATP8B3O60423 1300 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 MCF2P10911 925 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 RPL13P26373 211 aaKnown RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 PTGDRQ13258 359 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 MRPL48Q96GC5 212 aaKnown RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 RUNDC3BQ96NL0 473 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 EXOC1Q9NV70 894 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 SELENONQ9NZV5 590 aa6.03□□□□□ -1.44
USF3-202ENST00000478658 LRPPRCP42704 1394 aaKnown RBP6.03□□□□□ -1.44
USF3-202ENST00000478658 SMIM24O75264 130 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 NBPF7P0C2Y1 421 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 NPY2RP49146 381 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 TNNC1P63316 161 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 DRP2Q13474 957 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 KIF22Q14807 665 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 TRIP4Q15650 581 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 ZNF568Q3ZCX4 644 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 ST13P4Q8IZP2 240 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 ZNF444Q8N0Y2 327 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 TMEM57Q8N5G2 664 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 RPGRQ92834 1020 aaKnown RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 CIZ1Q9ULV3 898 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 PLCG2P16885 1265 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 JAK1P23458 1154 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 HSPA1LP34931 641 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 RNASELQ05823 741 aaKnown RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 MYO1EQ12965 1108 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 TTC19Q6DKK2 380 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 LRRC8EQ6NSJ5 796 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 RAB42Q8N4Z0 105 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 USP6NLQ92738 828 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 ZNF428Q96B54 188 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 PHF21AQ96BD5 680 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 CEP19Q96LK0 163 aa6.02□□□□□ -1.45
USF3-202ENST00000478658 GPHNQ9NQX3 736 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 PRG3Q9Y2Y8 225 aaPredicted RBP6.02□□□□□ -1.45
USF3-202ENST00000478658 CUX1P39880 1505 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms