RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 CSF1RP07333 972 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 IGHMBP2P38935 993 aaKnown RBP7.06□□□□□ -1.28
TRA2B-211ENST00000477939 IRX5P78411 483 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-211ENST00000477939 TRDNQ13061 729 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 LONRF3Q496Y0 759 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 HSP90B2PQ58FF3 399 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 STRIP1Q5VSL9 837 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 PRAMEF18Q5VWM3 479 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 ZNF280DQ6N043 979 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 MOB2Q70IA6 237 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 HELBQ8NG08 1087 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-211ENST00000477939 CCDC102AQ96A19 550 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 TIGD1Q96MW7 591 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 TRAIPQ9BWF2 469 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 COA1Q9GZY4 146 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 SPINK5Q9NQ38 1064 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-211ENST00000477939 RNF186Q9NXI6 227 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 SAGE1Q9NXZ1 904 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 CALCOCO1Q9P1Z2 691 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 ABCF2Q9UG63 623 aa7.06□□□□□ -1.28
TRA2B-211ENST00000477939 PDE4DIPQ5VU43 2346 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 SSC5DA1L4H1 1573 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 SNAP23O00161 211 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 MPHOSPH10O00566 681 aaKnown RBP7.05□□□□□ -1.28
TRA2B-211ENST00000477939 ZBTB22O15209 634 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 IPO7O95373 1038 aaKnown RBP7.05□□□□□ -1.28
TRA2B-211ENST00000477939 SETSIPP0DME0 302 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 PEX19P40855 299 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 FKBP1BP68106 108 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 FOXO4P98177 505 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 EXOSC9Q06265 439 aaKnown RBP7.05□□□□□ -1.28
TRA2B-211ENST00000477939 CHRNDQ07001 517 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 DGKZQ13574 1117 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 RPAINQ86UA6 219 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 KIAA0825Q8IV33 1275 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 FBXW7Q969H0 707 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 CCDC97Q96F63 343 aaPredicted RBP7.05□□□□□ -1.28
TRA2B-211ENST00000477939 CSRNP1Q96S65 589 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 MPHOSPH8Q99549 860 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 C1orf115Q9H7X2 142 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 DONSONQ9NYP3 566 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 MAGEC2Q9UBF1 373 aaPredicted RBP7.05□□□□□ -1.28
TRA2B-211ENST00000477939 LEMD3Q9Y2U8 911 aa7.05□□□□□ -1.28
TRA2B-211ENST00000477939 OTOFQ9HC10 1997 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 GOLGA6CA6NDK9 693 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 GOLGA6BA6NDN3 693 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 TRPA1O75762 1119 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 GOLGA6DP0CG33 693 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 TNNT3P45378 269 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-211ENST00000477939 TDO2P48775 406 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 RGS19P49795 217 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 MCCD1P59942 119 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-211ENST00000477939 GTF2IP78347 998 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 EPHA10Q5JZY3 1008 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 BEND3Q5T5X7 828 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 TTLL5Q6EMB2 1281 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 WDR63Q8IWG1 891 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 OGFOD1Q8N543 542 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 CERS5Q8N5B7 392 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 LSM14AQ8ND56 463 aaKnown RBP7.04□□□□□ -1.28
TRA2B-211ENST00000477939 RNF217Q8TC41 542 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 ZBED3Q96IU2 234 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-211ENST00000477939 ANKRD2Q9GZV1 360 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 MED4Q9NPJ6 270 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 JADE2Q9NQC1 790 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 GOLGA6AQ9NYA3 693 aa7.04□□□□□ -1.28
TRA2B-211ENST00000477939 COL1A1P02452 1464 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-211ENST00000477939 ANKRD18BA2A2Z9 1011 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 UBE2Q2LH0YL09 131 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 GRM8O00222 908 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 PPP1R12AO14974 1030 aaPredicted RBP7.03□□□□□ -1.28
TRA2B-211ENST00000477939 TAF5LO75529 589 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 BRD1O95696 1058 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 SCP2P22307 547 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 KCNJ4P48050 445 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 IFIT5Q13325 482 aaKnown RBP7.03□□□□□ -1.28
TRA2B-211ENST00000477939 CCDC181Q5TID7 509 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 C15orf52Q6ZUT6 534 aaKnown RBP7.03□□□□□ -1.28
TRA2B-211ENST00000477939 APBB1IPQ7Z5R6 666 aaPredicted RBP7.03□□□□□ -1.28
TRA2B-211ENST00000477939 CACTIN-AS1Q8N1I8 211 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 LARP6Q9BRS8 491 aaKnown RBP7.03□□□□□ -1.28
TRA2B-211ENST00000477939 NUCKS1Q9H1E3 243 aaKnown RBP7.03□□□□□ -1.28
TRA2B-211ENST00000477939 CD209Q9NNX6 404 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 SYNPO2Q9UMS6 1093 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 PCDHAC2Q9Y5I4 1007 aa7.03□□□□□ -1.28
TRA2B-211ENST00000477939 AOX1Q06278 1338 aa7.02□□□□□ -1.28
TRA2B-211ENST00000477939 ZNF521Q96K83 1311 aa7.02□□□□□ -1.28
TRA2B-211ENST00000477939 KLHL33A6NCF5 533 aa7.02□□□□□ -1.29
TRA2B-211ENST00000477939 DHX16O60231 1041 aaKnown RBP7.02□□□□□ -1.29
TRA2B-211ENST00000477939 MLLT1Q03111 559 aaPredicted RBP7.02□□□□□ -1.29
TRA2B-211ENST00000477939 TTLL12Q14166 644 aaPredicted RBP7.02□□□□□ -1.29
TRA2B-211ENST00000477939 GJC2Q5T442 439 aaPredicted RBP7.02□□□□□ -1.29
TRA2B-211ENST00000477939 LMBR1LQ6UX01 489 aa7.02□□□□□ -1.29
TRA2B-211ENST00000477939 APOBEC3FQ8IUX4 373 aaKnown RBP7.02□□□□□ -1.29
TRA2B-211ENST00000477939 ZNF594Q96JF6 807 aaPredicted RBP7.02□□□□□ -1.29
TRA2B-211ENST00000477939 FZD1Q9UP38 647 aa7.02□□□□□ -1.29
TRA2B-211ENST00000477939 JAG2Q9Y219 1238 aa7.02□□□□□ -1.29
TRA2B-211ENST00000477939 CHMP3Q9Y3E7 222 aa7.02□□□□□ -1.29
TRA2B-211ENST00000477939 RAD50Q92878 1312 aa7.01□□□□□ -1.29
TRA2B-211ENST00000477939 SPDYE2BA6NHP3 402 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms