RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 FAM227BQ96M60 508 aa15.75■□□□□ 0.11
HDAC1-206ENST00000476391 CDK19Q9BWU1 502 aa15.75■□□□□ 0.11
HDAC1-206ENST00000476391 LZTFL1Q9NQ48 299 aa15.75■□□□□ 0.11
HDAC1-206ENST00000476391 MEFVO15553 781 aaPredicted RBP15.74■□□□□ 0.11
HDAC1-206ENST00000476391 YEATS4O95619 227 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 PAX7P23759 505 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 NAIF1Q69YI7 327 aaPredicted RBP15.74■□□□□ 0.11
HDAC1-206ENST00000476391 NEK1Q96PY6 1258 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 PANX2Q96RD6 677 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 FANCLQ9NW38 375 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 ADGRG1Q9Y653 693 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 GRIN2DO15399 1336 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 MED23Q9ULK4 1368 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 A0A1B0GUA9 196 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 SSR1P43307 286 aaKnown RBP15.74■□□□□ 0.11
HDAC1-206ENST00000476391 ADKP55263 362 aaKnown RBP15.74■□□□□ 0.11
HDAC1-206ENST00000476391 PLCB4Q15147 1175 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 ZNF569Q5MCW4 686 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 Q6ZUG5 572 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
HDAC1-206ENST00000476391 CRACR2AQ9BSW2 395 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 SIL1Q9H173 461 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 C19orf44Q9H6X5 657 aa15.74■□□□□ 0.11
HDAC1-206ENST00000476391 GGCXP38435 758 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 SMTNP53814 917 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 STK38Q15208 465 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 NAPGQ99747 312 aaPredicted RBP15.73■□□□□ 0.11
HDAC1-206ENST00000476391 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.73■□□□□ 0.11
HDAC1-206ENST00000476391 KLC4Q9NSK0 619 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 MYO1AQ9UBC5 1043 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 TAF6LQ9Y6J9 622 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 EDC4Q6P2E9 1401 aaKnown RBP15.73■□□□□ 0.11
HDAC1-206ENST00000476391 ANKRD33BA6NCL7 494 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 RTN2O75298 545 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 ALDH1L1O75891 902 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 USPL1Q5W0Q7 1092 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 OLFM4Q6UX06 510 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 POLR3EQ9NVU0 708 aa15.73■□□□□ 0.11
HDAC1-206ENST00000476391 SULT6B1Q6IMI4 303 aa15.72■□□□□ 0.11
HDAC1-206ENST00000476391 MICALCLQ6ZW33 695 aa15.72■□□□□ 0.11
HDAC1-206ENST00000476391 NOA1Q8NC60 698 aaKnown RBP15.72■□□□□ 0.11
HDAC1-206ENST00000476391 PAGR1Q9BTK6 254 aa15.72■□□□□ 0.11
HDAC1-206ENST00000476391 PTPDC1A2A3K4 754 aa15.72■□□□□ 0.11
HDAC1-206ENST00000476391 TARSL2A2RTX5 802 aaKnown RBP15.72■□□□□ 0.11
HDAC1-206ENST00000476391 CMA1P23946 247 aa15.72■□□□□ 0.11
HDAC1-206ENST00000476391 USP14P54578 494 aa15.72■□□□□ 0.11
HDAC1-206ENST00000476391 GRIK3Q13003 919 aa15.72■□□□□ 0.11
HDAC1-206ENST00000476391 RIN2Q8WYP3 895 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-206ENST00000476391 SH3GL2Q99962 352 aa15.72■□□□□ 0.11
HDAC1-206ENST00000476391 AGPSO00116 658 aa15.71■□□□□ 0.11
HDAC1-206ENST00000476391 INHBEP58166 350 aa15.71■□□□□ 0.11
HDAC1-206ENST00000476391 GNGT1P63211 74 aa15.71■□□□□ 0.11
HDAC1-206ENST00000476391 NBPF10Q6P3W6 841 aaKnown RBP15.71■□□□□ 0.11
HDAC1-206ENST00000476391 RASGRP2Q7LDG7 609 aa15.71■□□□□ 0.11
HDAC1-206ENST00000476391 MAGEC3Q8TD91 643 aa15.71■□□□□ 0.11
HDAC1-206ENST00000476391 MIS18AQ9NYP9 233 aa15.71■□□□□ 0.11
HDAC1-206ENST00000476391 SPTLC2O15270 562 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 MTF1Q14872 753 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 CEP85LQ5SZL2 805 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 TMED8Q6PL24 325 aaPredicted RBP15.7■□□□□ 0.1
HDAC1-206ENST00000476391 ANKRD18AQ8IVF6 992 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 SLC24A3Q9HC58 644 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 TTF2Q9UNY4 1162 aaKnown RBP15.7■□□□□ 0.1
HDAC1-206ENST00000476391 SALL1Q9NSC2 1324 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 A0A0D9SFI3 127 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 AKR1B15C9JRZ8 316 aaPredicted RBP15.7■□□□□ 0.1
HDAC1-206ENST00000476391 RASSF9O75901 435 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 CTDNEP1O95476 244 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 TBC1D8BQ0IIM8 1120 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 OS9Q13438 667 aaPredicted RBP15.7■□□□□ 0.1
HDAC1-206ENST00000476391 CCDC50Q8IVM0 306 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 SLC35F6Q8N357 371 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 CEMIPQ8WUJ3 1361 aa15.7■□□□□ 0.1
HDAC1-206ENST00000476391 SOWAHDA6NJG2 315 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 ZEB2O60315 1214 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 PFKFB1P16118 471 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 PTPN21Q16825 1174 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 VCPKMTQ9H867 229 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 MYO6Q9UM54 1294 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 GOLGA8KD6RF30 607 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 NDUFAB1O14561 156 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 SKOR1P84550 965 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 AKAP17AQ02040 695 aaKnown RBP15.69■□□□□ 0.1
HDAC1-206ENST00000476391 ICA1Q05084 483 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.69■□□□□ 0.1
HDAC1-206ENST00000476391 AGLP35573 1532 aa15.69■□□□□ 0.1
HDAC1-206ENST00000476391 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
HDAC1-206ENST00000476391 GOLGA6BA6NDN3 693 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 FOSBP53539 338 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 AMPD2Q01433 879 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 CCDC40Q4G0X9 1142 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 TTC19Q6DKK2 380 aaPredicted RBP15.68■□□□□ 0.1
HDAC1-206ENST00000476391 RAD9BQ6WBX8 426 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 SAMM50Q9Y512 469 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 CDR1P51861 262 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 ACTN3Q08043 901 aaPredicted RBP15.68■□□□□ 0.1
HDAC1-206ENST00000476391 ADCY2Q08462 1091 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 RRS1Q15050 365 aaKnown RBP15.68■□□□□ 0.1
HDAC1-206ENST00000476391 NBPF9Q3BBW0 867 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 NUTM2DQ5VT03 806 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms