RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 FAM105AQ9NUU6 356 aa8.53□□□□□ -1.04
LTN1-204ENST00000475344 P4HBP07237 508 aaKnown RBP8.52□□□□□ -1.05
LTN1-204ENST00000475344 NFICP08651 508 aa8.52□□□□□ -1.05
LTN1-204ENST00000475344 GSTP1P09211 210 aaKnown RBP8.52□□□□□ -1.05
LTN1-204ENST00000475344 GRIK1P39086 918 aa8.52□□□□□ -1.05
LTN1-204ENST00000475344 FBF1Q8TES7 1133 aa8.52□□□□□ -1.05
LTN1-204ENST00000475344 PPP1R9AQ9ULJ8 1098 aa8.52□□□□□ -1.05
LTN1-204ENST00000475344 FBXO24O75426 580 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 MED26O95402 600 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 LDHBP07195 334 aaKnown RBP8.51□□□□□ -1.05
LTN1-204ENST00000475344 GSTT1P30711 240 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 CD97P48960 835 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 SULF2Q8IWU5 870 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 SHISA5Q8N114 240 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 OSBPL1AQ9BXW6 950 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 OSBPL7Q9BZF2 842 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 CBX8Q9HC52 389 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 DAGLAQ9Y4D2 1042 aa8.51□□□□□ -1.05
LTN1-204ENST00000475344 PRR19A6NJB7 356 aa8.5□□□□□ -1.05
LTN1-204ENST00000475344 F13BP05160 661 aa8.5□□□□□ -1.05
LTN1-204ENST00000475344 MAP7Q14244 749 aa8.5□□□□□ -1.05
LTN1-204ENST00000475344 STK35Q8TDR2 534 aa8.5□□□□□ -1.05
LTN1-204ENST00000475344 SPG7Q9UQ90 795 aa8.5□□□□□ -1.05
LTN1-204ENST00000475344 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.49□□□□□ -1.05
LTN1-204ENST00000475344 TMPRSS2O15393 492 aa8.49□□□□□ -1.05
LTN1-204ENST00000475344 ZNF862O60290 1169 aa8.49□□□□□ -1.05
LTN1-204ENST00000475344 SLFN14P0C7P3 912 aa8.49□□□□□ -1.05
LTN1-204ENST00000475344 HNRNPUQ00839 825 aaKnown RBP eCLIP8.49□□□□□ -1.05
LTN1-204ENST00000475344 MAP1SQ66K74 1059 aaPredicted RBP8.49□□□□□ -1.05
LTN1-204ENST00000475344 C3orf58Q8NDZ4 430 aa8.49□□□□□ -1.05
LTN1-204ENST00000475344 EZH1Q92800 747 aaPredicted RBP8.49□□□□□ -1.05
LTN1-204ENST00000475344 SEMA6CQ9H3T2 930 aa8.49□□□□□ -1.05
LTN1-204ENST00000475344 PIDD1Q9HB75 910 aa8.49□□□□□ -1.05
LTN1-204ENST00000475344 PRKAG2Q9UGJ0 569 aa8.49□□□□□ -1.05
LTN1-204ENST00000475344 LEMD3Q9Y2U8 911 aa8.49□□□□□ -1.05
LTN1-204ENST00000475344 ADMP35318 185 aa8.48□□□□□ -1.05
LTN1-204ENST00000475344 ID3Q02535 119 aa8.48□□□□□ -1.05
LTN1-204ENST00000475344 SND1Q7KZF4 910 aaKnown RBP eCLIP8.48□□□□□ -1.05
LTN1-204ENST00000475344 ACSBG1Q96GR2 724 aa8.48□□□□□ -1.05
LTN1-204ENST00000475344 SRCIN1Q9C0H9 1055 aa8.48□□□□□ -1.05
LTN1-204ENST00000475344 PIM2Q9P1W9 311 aa8.48□□□□□ -1.05
LTN1-204ENST00000475344 NME2P22392 152 aa8.47□□□□□ -1.05
LTN1-204ENST00000475344 ARNTP27540 789 aa8.47□□□□□ -1.05
LTN1-204ENST00000475344 HOXA10P31260 410 aaPredicted RBP8.47□□□□□ -1.05
LTN1-204ENST00000475344 INTS5Q6P9B9 1019 aaKnown RBP8.47□□□□□ -1.05
LTN1-204ENST00000475344 PDZD3Q86UT5 571 aa8.47□□□□□ -1.05
LTN1-204ENST00000475344 ACSS3Q9H6R3 686 aa8.47□□□□□ -1.05
LTN1-204ENST00000475344 C12orf49Q9H741 205 aa8.47□□□□□ -1.05
LTN1-204ENST00000475344 ANKRD33BA6NCL7 494 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 FAM170BA6NMN3 283 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 RNGTTO60942 597 aaKnown RBP8.46□□□□□ -1.06
LTN1-204ENST00000475344 USP17L7P0C7H9 530 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 ZAR1Q86SH2 424 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 NECAB3Q96P71 396 aaPredicted RBP8.46□□□□□ -1.06
LTN1-204ENST00000475344 FANCD2OSQ96PS1 177 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 EMILIN2Q9BXX0 1053 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 CEP44Q9C0F1 390 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 ATXN3LQ9H3M9 355 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 KRT82Q9NSB4 513 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 CRIM1Q9NZV1 1036 aa8.46□□□□□ -1.06
LTN1-204ENST00000475344 GIPC1O14908 333 aa8.45□□□□□ -1.06
LTN1-204ENST00000475344 DYNC1LI2O43237 492 aaPredicted RBP8.45□□□□□ -1.06
LTN1-204ENST00000475344 HCLS1P14317 486 aaPredicted RBP8.45□□□□□ -1.06
LTN1-204ENST00000475344 KIF4BQ2VIQ3 1234 aa8.45□□□□□ -1.06
LTN1-204ENST00000475344 GPBAR1Q8TDU6 330 aa8.45□□□□□ -1.06
LTN1-204ENST00000475344 METTL22Q9BUU2 404 aaPredicted RBP8.45□□□□□ -1.06
LTN1-204ENST00000475344 FAM8A1Q9UBU6 413 aa8.45□□□□□ -1.06
LTN1-204ENST00000475344 KIAA1324LA8MWY0 1029 aaPredicted RBP8.44□□□□□ -1.06
LTN1-204ENST00000475344 ENC1O14682 589 aa8.44□□□□□ -1.06
LTN1-204ENST00000475344 CYP26A1O43174 497 aa8.44□□□□□ -1.06
LTN1-204ENST00000475344 PAGE1O75459 146 aa8.44□□□□□ -1.06
LTN1-204ENST00000475344 TTLL4Q14679 1199 aa8.44□□□□□ -1.06
LTN1-204ENST00000475344 MPRIPQ6WCQ1 1025 aa8.44□□□□□ -1.06
LTN1-204ENST00000475344 GRIN3AQ8TCU5 1115 aa8.44□□□□□ -1.06
LTN1-204ENST00000475344 GSX1Q9H4S2 264 aaPredicted RBP8.44□□□□□ -1.06
LTN1-204ENST00000475344 LRRC4CQ9HCJ2 640 aa8.44□□□□□ -1.06
LTN1-204ENST00000475344 PPM1HQ9ULR3 514 aa8.44□□□□□ -1.06
LTN1-204ENST00000475344 TTF2Q9UNY4 1162 aaKnown RBP8.44□□□□□ -1.06
LTN1-204ENST00000475344 SAMM50Q9Y512 469 aa8.44□□□□□ -1.06
LTN1-204ENST00000475344 EAPPQ56P03 285 aaPredicted RBP8.43□□□□□ -1.06
LTN1-204ENST00000475344 DUSP27Q5VZP5 1158 aa8.43□□□□□ -1.06
LTN1-204ENST00000475344 ZNF765Q7L2R6 523 aa8.43□□□□□ -1.06
LTN1-204ENST00000475344 SMYD4Q8IYR2 804 aaPredicted RBP8.43□□□□□ -1.06
LTN1-204ENST00000475344 SSU72Q9NP77 194 aaKnown RBP8.43□□□□□ -1.06
LTN1-204ENST00000475344 DISC1Q9NRI5 854 aa8.43□□□□□ -1.06
LTN1-204ENST00000475344 PCDHGC5Q9Y5F6 944 aa8.43□□□□□ -1.06
LTN1-204ENST00000475344 CSADQ9Y600 493 aa8.43□□□□□ -1.06
LTN1-204ENST00000475344 SYNGAP1Q96PV0 1343 aa8.43□□□□□ -1.06
LTN1-204ENST00000475344 CELA3AP09093 270 aa8.42□□□□□ -1.06
LTN1-204ENST00000475344 EIF4BP23588 611 aaKnown RBP8.42□□□□□ -1.06
LTN1-204ENST00000475344 GATA6Q92908 595 aa8.42□□□□□ -1.06
LTN1-204ENST00000475344 PICK1Q9NRD5 415 aa8.42□□□□□ -1.06
LTN1-204ENST00000475344 RNF19AQ9NV58 838 aa8.42□□□□□ -1.06
LTN1-204ENST00000475344 PRPF40AO75400 957 aaKnown RBP8.41□□□□□ -1.06
LTN1-204ENST00000475344 FOSL1P15407 271 aa8.41□□□□□ -1.06
LTN1-204ENST00000475344 SPINK2P20155 84 aa8.41□□□□□ -1.06
LTN1-204ENST00000475344 BMP6P22004 513 aa8.41□□□□□ -1.06
LTN1-204ENST00000475344 GNA15P30679 374 aa8.41□□□□□ -1.06
LTN1-204ENST00000475344 CDK5R2Q13319 367 aa8.41□□□□□ -1.06
LTN1-204ENST00000475344 LLGL2Q6P1M3 1020 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms