RNA–Protein interactions for RNA: ENST00000475309.5

WIPI2-208, Transcript of WD repeat domain, phosphoinositide interacting 2, human

TSL 1 (best)

Gene WIPI2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WIPI2-208	ENST00000475309	KIF4A	O95239	1232 aa		11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	IFIT2	P09913	472 aa	Known RBP	11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	GCFC2	P16383	781 aa	Known RBP	11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	FOSB	P53539	338 aa		11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	FANCC	Q00597	558 aa		11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	SCRN1	Q12765	414 aa		11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	PRPF40B	Q6NWY9	871 aa	Known RBP	11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	NUTM1	Q86Y26	1132 aa		11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	TEX11	Q8IYF3	940 aa		11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	DLC1	Q96QB1	1528 aa		11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	ATRN	O75882	1429 aa		11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309	DCC	P43146	1447 aa		11.65	□□□□□ -0.54
WIPI2-208	ENST00000475309		H0YHG0	523 aa		11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	STX10	O60499	249 aa		11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	HMOX1	P09601	288 aa		11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	NF2	P35240	595 aa		11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	SARNP	P82979	210 aa	Known RBP	11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	SF3B2	Q13435	895 aa	Known RBP	11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	NECTIN1	Q15223	517 aa		11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	ZFYVE27	Q5T4F4	411 aa		11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	SPATS2	Q86XZ4	545 aa	Known RBP	11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	AMOTL1	Q8IY63	956 aa		11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	GOLPH3L	Q9H4A5	285 aa		11.65	□□□□□ -0.55
WIPI2-208	ENST00000475309	FAM208A	Q9UK61	1670 aa	Known RBP	11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309		H3BQV1	296 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	WDHD1	O75717	1129 aa	Predicted RBP	11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	MAP4K4	O95819	1239 aa	Predicted RBP	11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	CRYM	Q14894	314 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	IFFO2	Q5TF58	517 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	FBXW10	Q5XX13	1052 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	FAXDC2	Q96IV6	333 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	ZNF396	Q96N95	335 aa	Predicted RBP	11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	JPH2	Q9BR39	696 aa	Predicted RBP	11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	WDR70	Q9NW82	654 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	CDC23	Q9UJX2	597 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	SPG7	Q9UQ90	795 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	NALCN	Q8IZF0	1738 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	SHTN1	A0MZ66	631 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	MCM3	P25205	808 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	KIF4B	Q2VIQ3	1234 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	PREPL	Q4J6C6	727 aa	Predicted RBP	11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	SMARCC1	Q92922	1105 aa	Predicted RBP	11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	UBA5	Q9GZZ9	404 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	KIAA1468	Q9P260	1216 aa		11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	USP42	Q9H9J4	1324 aa	Known RBP	11.64	□□□□□ -0.55
WIPI2-208	ENST00000475309	MAP3K5	Q99683	1374 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	PXDNL	A1KZ92	1463 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	PNMA6E	A0A0J9YXQ4	647 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	CHL1	O00533	1208 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	PRPF6	O94906	941 aa	Known RBP	11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	MRPL12	P52815	198 aa	Known RBP	11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	NLRP12	P59046	1061 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	MCCD1	P59942	119 aa	Predicted RBP	11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	TMEM139	Q8IV31	216 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	VSTM4	Q8IW00	320 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	C8orf37	Q96NL8	207 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	PNKP	Q96T60	521 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	SLC4A2	P04920	1241 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	TOP1	P11387	765 aa	Known RBP	11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	BLOC1S2	Q6QNY1	142 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	ZNF662	Q6ZS27	426 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	NME9	Q86XW9	330 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	FSIP1	Q8NA03	581 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	LRRC59	Q96AG4	307 aa	Known RBP	11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	SDF4	Q9BRK5	362 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	PLEKHA4	Q9H4M7	779 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309	TECPR2	O15040	1411 aa		11.63	□□□□□ -0.55
WIPI2-208	ENST00000475309		A6NNZ2	444 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	FSBP	O95073	299 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	UBASH3A	P57075	661 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	NCAPH	Q15003	741 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	DPCR1	Q3MIW9	517 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	TUBB8	Q3ZCM7	444 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	WDR93	Q6P2C0	686 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	CPLX2	Q6PUV4	134 aa	Known RBP	11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	SLC4A10	Q6U841	1118 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	BARGIN	Q6ZT62	677 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	MRPS27	Q92552	414 aa	Known RBP	11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	BRF1	Q92994	677 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	BAG1	Q99933	345 aa	Predicted RBP	11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	CDHR2	Q9BYE9	1310 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	ATP7B	P35670	1465 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	CCT5	P48643	541 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	PTH1R	Q03431	593 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	WDR78	Q5VTH9	848 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	CREB3L3	Q68CJ9	461 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	NAA16	Q6N069	864 aa	Predicted RBP	11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	MORC4	Q8TE76	937 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	N4BP2L2	Q92802	583 aa	Predicted RBP	11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	PRR36	Q9H6K5	1346 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	TRPC5	Q9UL62	973 aa	Predicted RBP	11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309	CCDC61	Q9Y6R9	512 aa		11.62	□□□□□ -0.55
WIPI2-208	ENST00000475309		A0A1W2PQ27	194 aa		11.61	□□□□□ -0.55
WIPI2-208	ENST00000475309		A0A1W2PQ64	194 aa		11.61	□□□□□ -0.55
WIPI2-208	ENST00000475309		A0A1W2PQD8	194 aa		11.61	□□□□□ -0.55
WIPI2-208	ENST00000475309	PHACTR2	O75167	634 aa		11.61	□□□□□ -0.55
WIPI2-208	ENST00000475309	GLRX3	O76003	335 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms