RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ZSCAN16Q9H4T2 348 aaPredicted RBP15.03■□□□□ -0
CCNL1-216ENST00000475298 TBC1D2BQ9UPU7 963 aa15.03■□□□□ -0
CCNL1-216ENST00000475298 KIF2AO00139 706 aaPredicted RBP15.02■□□□□ -0
CCNL1-216ENST00000475298 CYP19A1P11511 503 aaPredicted RBP15.02■□□□□ -0
CCNL1-216ENST00000475298 OAS2P29728 719 aaKnown RBP15.02■□□□□ -0
CCNL1-216ENST00000475298 IQCB1Q15051 598 aa15.02■□□□□ -0
CCNL1-216ENST00000475298 OTUD7BQ6GQQ9 843 aa15.02■□□□□ -0
CCNL1-216ENST00000475298 TMCO3Q6UWJ1 677 aa15.02■□□□□ -0
CCNL1-216ENST00000475298 BRMS1Q9HCU9 246 aa15.02■□□□□ -0
CCNL1-216ENST00000475298 DDX19AQ9NUU7 478 aaKnown RBP15.02■□□□□ -0
CCNL1-216ENST00000475298 ORC3Q9UBD5 711 aaPredicted RBP15.02■□□□□ -0
CCNL1-216ENST00000475298 DENND2AQ9ULE3 1009 aa15.02■□□□□ -0
CCNL1-216ENST00000475298 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.02■□□□□ -01e-8■■■□□ 16.1
CCNL1-216ENST00000475298 IRS4O14654 1257 aaPredicted RBP15.02□□□□□ -0.01
CCNL1-216ENST00000475298 GPAA1O43292 621 aa15.02□□□□□ -0.01
CCNL1-216ENST00000475298 SEC31AO94979 1220 aaKnown RBP15.02□□□□□ -0.01
CCNL1-216ENST00000475298 PRR29P0C7W0 189 aa15.02□□□□□ -0.01
CCNL1-216ENST00000475298 FDPSP14324 419 aaKnown RBP15.02□□□□□ -0.01
CCNL1-216ENST00000475298 CTSWP56202 376 aa15.02□□□□□ -0.01
CCNL1-216ENST00000475298 NKX2-3Q8TAU0 364 aa15.02□□□□□ -0.01
CCNL1-216ENST00000475298 APPBP2Q92624 585 aa15.02□□□□□ -0.01
CCNL1-216ENST00000475298 USP28Q96RU2 1077 aa15.02□□□□□ -0.01
CCNL1-216ENST00000475298 MYCBPQ99417 103 aaPredicted RBP15.02□□□□□ -0.01
CCNL1-216ENST00000475298 CNNM1Q9NRU3 951 aa15.02□□□□□ -0.01
CCNL1-216ENST00000475298 TRMT112Q9UI30 125 aaKnown RBP15.02□□□□□ -0.01
CCNL1-216ENST00000475298 MYH15Q9Y2K3 1946 aa15.01□□□□□ -0.01
CCNL1-216ENST00000475298 IMMTQ16891 758 aaKnown RBP15.01□□□□□ -0.01
CCNL1-216ENST00000475298 NAA16Q6N069 864 aaPredicted RBP15.01□□□□□ -0.01
CCNL1-216ENST00000475298 FILIP1Q7Z7B0 1213 aa15.01□□□□□ -0.01
CCNL1-216ENST00000475298 GOLGA5Q8TBA6 731 aa15.01□□□□□ -0.01
CCNL1-216ENST00000475298 FBXO3Q9UK99 471 aa15.01□□□□□ -0.01
CCNL1-216ENST00000475298 CARMIL3Q8ND23 1372 aa15.01□□□□□ -0.01
CCNL1-216ENST00000475298 MYO5AQ9Y4I1 1855 aaKnown RBP15.01□□□□□ -0.01
CCNL1-216ENST00000475298 SNW1Q13573 536 aaKnown RBP15□□□□□ -0.01
CCNL1-216ENST00000475298 E4F1Q66K89 784 aaPredicted RBP15□□□□□ -0.01
CCNL1-216ENST00000475298 HELBQ8NG08 1087 aaPredicted RBP15□□□□□ -0.01
CCNL1-216ENST00000475298 ZNF274Q96GC6 653 aaPredicted RBP15□□□□□ -0.01
CCNL1-216ENST00000475298 GOLPH3LQ9H4A5 285 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 CFAP45Q9UL16 551 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 NHSL1Q5SYE7 1610 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 AKAP11Q9UKA4 1901 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 BCL9O00512 1426 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 LTBP4Q8N2S1 1624 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 PRC1O43663 620 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 TBC1D8O95759 1140 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 ZFYP08048 801 aaPredicted RBP15□□□□□ -0.01
CCNL1-216ENST00000475298 ANTXR2P58335 489 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 GPS2Q13227 327 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 PACS2Q86VP3 889 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 IQUBQ8NA54 791 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 GJB4Q9NTQ9 266 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 CWC15Q9P013 229 aaKnown RBP15□□□□□ -0.01
CCNL1-216ENST00000475298 JRKLQ9Y4A0 524 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 CDHR2Q9BYE9 1310 aa15□□□□□ -0.01
CCNL1-216ENST00000475298 MYH7P12883 1935 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 A0A0G2JS52 829 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 ANKRD18BA2A2Z9 1011 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
CCNL1-216ENST00000475298 TICAM2Q86XR7 235 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 MB21D2Q8IYB1 491 aaPredicted RBP14.99□□□□□ -0.01
CCNL1-216ENST00000475298 VGLL2Q8N8G2 317 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 PIH1D3Q9NQM4 214 aaKnown RBP14.99□□□□□ -0.01
CCNL1-216ENST00000475298 UBN2Q6ZU65 1347 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 LRP6O75581 1613 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 A0A087WWV3 80 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 KLF18A0A0U1RQI7 1052 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 SNAP23O00161 211 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 ATP8B1O43520 1251 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 LRRFIP1Q32MZ4 808 aaKnown RBP14.99□□□□□ -0.01
CCNL1-216ENST00000475298 SLC9C2Q5TAH2 1124 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 PPP1R13BQ96KQ4 1090 aa14.99□□□□□ -0.01
CCNL1-216ENST00000475298 GOLGA8BA8MQT2 603 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 IDH1O75874 414 aaKnown RBP14.98□□□□□ -0.01
CCNL1-216ENST00000475298 PHKA1P46020 1223 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 SMC1AQ14683 1233 aaKnown RBP14.98□□□□□ -0.01
CCNL1-216ENST00000475298 CCAR1Q8IX12 1150 aaKnown RBP14.98□□□□□ -0.01
CCNL1-216ENST00000475298 NBPF3Q9H094 633 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 TOMM22Q9NS69 142 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 ARGLU1Q9NWB6 273 aaPredicted RBP14.98□□□□□ -0.01
CCNL1-216ENST00000475298 TAOK2Q9UL54 1235 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 HPS5Q9UPZ3 1129 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 BRD2P25440 801 aaKnown RBP14.98□□□□□ -0.01
CCNL1-216ENST00000475298 DZIP3Q86Y13 1208 aaKnown RBP14.98□□□□□ -0.01
CCNL1-216ENST00000475298 PSD3Q9NYI0 1048 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 RCOR1Q9UKL0 485 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 DISP2A7MBM2 1401 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 MYH3P11055 1940 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 NUP98P52948 1817 aa14.98□□□□□ -0.01
CCNL1-216ENST00000475298 ZNF213O14771 459 aa14.97□□□□□ -0.01
CCNL1-216ENST00000475298 ADD2P35612 726 aa14.97□□□□□ -0.01
CCNL1-216ENST00000475298 C11orf57Q6ZUT1 292 aaPredicted RBP14.97□□□□□ -0.01
CCNL1-216ENST00000475298 ERCC4Q92889 916 aaPredicted RBP14.97□□□□□ -0.01
CCNL1-216ENST00000475298 CLGNO14967 610 aa14.97□□□□□ -0.01
CCNL1-216ENST00000475298 ANKRD36CQ5JPF3 1778 aa14.97□□□□□ -0.01
CCNL1-216ENST00000475298 SLIT2O94813 1529 aa14.96□□□□□ -0.01
CCNL1-216ENST00000475298 PDE8BO95263 885 aa14.96□□□□□ -0.01
CCNL1-216ENST00000475298 POLR3DP05423 398 aaPredicted RBP14.96□□□□□ -0.01
CCNL1-216ENST00000475298 EVCP57679 992 aa14.96□□□□□ -0.01
CCNL1-216ENST00000475298 CCDC102BQ68D86 513 aa14.96□□□□□ -0.01
CCNL1-216ENST00000475298 RALYLQ86SE5 291 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms