RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 SSC5DA1L4H1 1573 aa15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 RRP1P56182 461 aaKnown RBP15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 KIF23Q02241 960 aaPredicted RBP15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 MECOMQ03112 1051 aa15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 MKRN3Q13064 507 aaKnown RBP15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 CDC42EP5Q6NZY7 148 aa15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 SLF2Q8IX21 1173 aa15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 RHPN1Q8TCX5 695 aa15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 USP40Q9NVE5 1235 aa15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 LRP2BPQ9P2M1 347 aa15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 TSKSQ9UJT2 592 aa15.47■□□□□ 0.07
PPP1R3F-204ENST00000471261 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.07
PPP1R3F-204ENST00000471261 LBX1P52954 281 aa15.46■□□□□ 0.07
PPP1R3F-204ENST00000471261 TCP10Q12799 353 aa15.46■□□□□ 0.07
PPP1R3F-204ENST00000471261 TEPSINQ96N21 525 aa15.46■□□□□ 0.07
PPP1R3F-204ENST00000471261 THSD7BQ9C0I4 1608 aa15.46■□□□□ 0.06
PPP1R3F-204ENST00000471261 LDLRAD1Q5T700 205 aa15.45■□□□□ 0.06
PPP1R3F-204ENST00000471261 FKBP1CQ5VVH2 108 aa15.45■□□□□ 0.06
PPP1R3F-204ENST00000471261 FAM83AQ86UY5 434 aa15.45■□□□□ 0.06
PPP1R3F-204ENST00000471261 CLASRPQ8N2M8 674 aaKnown RBP15.45■□□□□ 0.06
PPP1R3F-204ENST00000471261 KIF1BPQ96EK5 621 aa15.45■□□□□ 0.06
PPP1R3F-204ENST00000471261 SLC10A4Q96EP9 437 aa15.45■□□□□ 0.06
PPP1R3F-204ENST00000471261 CLMNQ96JQ2 1002 aa15.45■□□□□ 0.06
PPP1R3F-204ENST00000471261 USP2O75604 605 aaPredicted RBP15.44■□□□□ 0.06
PPP1R3F-204ENST00000471261 HSPA8P11142 646 aaKnown RBP15.44■□□□□ 0.06
PPP1R3F-204ENST00000471261 BTDP43251 543 aa15.44■□□□□ 0.06
PPP1R3F-204ENST00000471261 GSTO1P78417 241 aa15.44■□□□□ 0.06
PPP1R3F-204ENST00000471261 NFIAQ12857 509 aa15.44■□□□□ 0.06
PPP1R3F-204ENST00000471261 MAP3K11Q16584 847 aa15.44■□□□□ 0.06
PPP1R3F-204ENST00000471261 MROH7-TTC4A0A0A0MT08 1334 aa15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 GAKO14976 1311 aa15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 CA12O43570 354 aa15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 RAB11FIP3O75154 756 aa15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 CYP2E1P05181 493 aaPredicted RBP15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 IFIT2P09913 472 aaKnown RBP15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 ZAP70P43403 619 aa15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 NSUN4Q96CB9 384 aaKnown RBP15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 ZNF512BQ96KM6 892 aaPredicted RBP15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 CSRNP1Q96S65 589 aa15.43■□□□□ 0.06
PPP1R3F-204ENST00000471261 LDHCP07864 332 aa15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 PICALMQ13492 652 aa15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 MIGA2Q7L4E1 593 aa15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 ANKRD13AQ8IZ07 590 aa15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 ZNF384Q8TF68 577 aa15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 FAM151AQ8WW52 585 aa15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 HOOK2Q96ED9 719 aa15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 FAM163AQ96GL9 167 aaPredicted RBP15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 FAM198AQ9UFP1 575 aa15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 NDUFB9Q9Y6M9 179 aa15.42■□□□□ 0.06
PPP1R3F-204ENST00000471261 GPR75-ASB3A0A0A6YYF3 556 aa15.41■□□□□ 0.06
PPP1R3F-204ENST00000471261 TRPA1O75762 1119 aa15.41■□□□□ 0.06
PPP1R3F-204ENST00000471261 RGS3P49796 1198 aa15.41■□□□□ 0.06
PPP1R3F-204ENST00000471261 SPRYD7Q5W111 196 aa15.41■□□□□ 0.06
PPP1R3F-204ENST00000471261 DCAF15Q66K64 600 aa15.41■□□□□ 0.06
PPP1R3F-204ENST00000471261 NAA16Q6N069 864 aaPredicted RBP15.41■□□□□ 0.06
PPP1R3F-204ENST00000471261 NOL10Q9BSC4 688 aaKnown RBP15.41■□□□□ 0.06
PPP1R3F-204ENST00000471261 ELP3Q9H9T3 547 aa15.41■□□□□ 0.06
PPP1R3F-204ENST00000471261 PRDM10Q9NQV6 1147 aa15.41■□□□□ 0.06
PPP1R3F-204ENST00000471261 RPAP1Q9BWH6 1393 aaPredicted RBP15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 UNCXA6NJT0 531 aa15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 IDH1O75874 414 aaKnown RBP15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 ZSCAN29Q8IWY8 852 aaPredicted RBP15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 ZFPM1Q8IX07 1006 aa15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 WRNIP1Q96S55 665 aa15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 CRBNQ96SW2 442 aa15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 LRRCC1Q9C099 1032 aa15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 PIH1D3Q9NQM4 214 aaKnown RBP15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 CSADQ9Y600 493 aa15.4■□□□□ 0.06
PPP1R3F-204ENST00000471261 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
PPP1R3F-204ENST00000471261 WDHD1O75717 1129 aaPredicted RBP15.39■□□□□ 0.05
PPP1R3F-204ENST00000471261 MAP3K9P80192 1104 aa15.39■□□□□ 0.05
PPP1R3F-204ENST00000471261 SREBF2Q12772 1141 aa15.39■□□□□ 0.05
PPP1R3F-204ENST00000471261 VGLL4Q14135 290 aa15.39■□□□□ 0.05
PPP1R3F-204ENST00000471261 TNS4Q8IZW8 715 aa15.39■□□□□ 0.05
PPP1R3F-204ENST00000471261 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.39■□□□□ 0.05
PPP1R3F-204ENST00000471261 WNK4Q96J92 1243 aa15.39■□□□□ 0.05
PPP1R3F-204ENST00000471261 IDI2Q9BXS1 227 aa15.39■□□□□ 0.05
PPP1R3F-204ENST00000471261 SMARCA5O60264 1052 aaPredicted RBP15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 ZBTB48P10074 688 aaPredicted RBP15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 ZKSCAN4Q969J2 545 aaPredicted RBP15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 OPTNQ96CV9 577 aa15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 ZNF341Q9BYN7 854 aa15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 ANTXR1Q9H6X2 564 aa15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 DDX4Q9NQI0 724 aaKnown RBP15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 SAGE1Q9NXZ1 904 aa15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 AATFQ9NY61 560 aaKnown RBP eCLIP15.38■□□□□ 0.05
PPP1R3F-204ENST00000471261 ENTPD3O75355 529 aa15.37■□□□□ 0.05
PPP1R3F-204ENST00000471261 BAG3O95817 575 aa15.37■□□□□ 0.05
PPP1R3F-204ENST00000471261 RHBDL3P58872 404 aa15.37■□□□□ 0.05
PPP1R3F-204ENST00000471261 TEX11Q8IYF3 940 aa15.37■□□□□ 0.05
PPP1R3F-204ENST00000471261 SH3RF3Q8TEJ3 882 aaPredicted RBP15.37■□□□□ 0.05
PPP1R3F-204ENST00000471261 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
PPP1R3F-204ENST00000471261 DNAJC2Q99543 621 aaKnown RBP15.37■□□□□ 0.05
PPP1R3F-204ENST00000471261 PCDHB15Q9Y5E8 787 aa15.37■□□□□ 0.05
PPP1R3F-204ENST00000471261 MANSC4A6NHS7 340 aaPredicted RBP15.36■□□□□ 0.05
PPP1R3F-204ENST00000471261 CYP7A1P22680 504 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms