RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TBC1D2BQ9UPU7 963 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 CDHR2Q9BYE9 1310 aa8.2□□□□□ -1.1
VAMP3-202ENST00000470357 TNRC6CQ9HCJ0 1690 aaKnown RBP8.2□□□□□ -1.1
VAMP3-202ENST00000470357 FAM187AA6NFU0 413 aa8.19□□□□□ -1.1
VAMP3-202ENST00000470357 GLTPD2A6NH11 291 aa8.19□□□□□ -1.1
VAMP3-202ENST00000470357 SRGAP3O43295 1099 aa8.19□□□□□ -1.1
VAMP3-202ENST00000470357 VEGFAP15692 232 aaPredicted RBP8.19□□□□□ -1.1
VAMP3-202ENST00000470357 AGERQ15109 404 aa8.19□□□□□ -1.1
VAMP3-202ENST00000470357 NLRP10Q86W26 655 aa8.19□□□□□ -1.1
VAMP3-202ENST00000470357 SNIP1Q8TAD8 396 aaKnown RBP8.19□□□□□ -1.1
VAMP3-202ENST00000470357 ZC3H4Q9UPT8 1303 aaKnown RBP8.19□□□□□ -1.1
VAMP3-202ENST00000470357 POLRMTO00411 1230 aaKnown RBP8.18□□□□□ -1.1
VAMP3-202ENST00000470357 SIAH2O43255 324 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 RAB11FIP3O75154 756 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 NUCB1Q02818 461 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 RASSF7Q02833 373 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 HLFQ16534 295 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 RABL6Q3YEC7 729 aaPredicted RBP8.18□□□□□ -1.1
VAMP3-202ENST00000470357 PKDCCQ504Y2 493 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 ERC1Q8IUD2 1116 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 SIRT2Q8IXJ6 389 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 UTP14AQ9BVJ6 771 aaKnown RBP8.18□□□□□ -1.1
VAMP3-202ENST00000470357 PLA2G12BQ9BX93 195 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 NYXQ9GZU5 481 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 TRMT112Q9UI30 125 aaKnown RBP8.18□□□□□ -1.1
VAMP3-202ENST00000470357 NIP7Q9Y221 180 aaKnown RBP eCLIP8.18□□□□□ -1.1
VAMP3-202ENST00000470357 SH3TC1Q8TE82 1336 aa8.18□□□□□ -1.1
VAMP3-202ENST00000470357 USP42Q9H9J4 1324 aaKnown RBP8.18□□□□□ -1.1
VAMP3-202ENST00000470357 J3QL48 77 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 DGAT1O75907 488 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 GPTP24298 496 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 CASP7P55210 303 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 ERICH6Q7L0X2 663 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 CHD1LQ86WJ1 897 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 BANK1Q8NDB2 785 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 SUCLG2Q96I99 432 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 BICC1Q9H694 974 aaKnown RBP8.17□□□□□ -1.1
VAMP3-202ENST00000470357 SNRKQ9NRH2 765 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 FKBPLQ9UIM3 349 aa8.17□□□□□ -1.1
VAMP3-202ENST00000470357 PNMA6EA0A0J9YXQ4 647 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 NFKBIEO00221 500 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 PDE8AO60658 829 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 ALDH1A1P00352 501 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 LMNB1P20700 586 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 VARSP26640 1264 aaKnown RBP8.16□□□□□ -1.1
VAMP3-202ENST00000470357 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 ANKRD45Q5TZF3 282 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 USPL1Q5W0Q7 1092 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 BPHLQ86WA6 291 aaPredicted RBP8.16□□□□□ -1.1
VAMP3-202ENST00000470357 HOMEZQ8IX15 550 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 DDX60Q8IY21 1712 aaKnown RBP8.16□□□□□ -1.1
VAMP3-202ENST00000470357 CARMIL3Q8ND23 1372 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 KIF1BPQ96EK5 621 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 KAZALD1Q96I82 304 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 TRIM34Q9BYJ4 488 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 LRRCC1Q9C099 1032 aa8.16□□□□□ -1.1
VAMP3-202ENST00000470357 NOP58Q9Y2X3 529 aaKnown RBP8.16□□□□□ -1.1
VAMP3-202ENST00000470357 UBN2Q6ZU65 1347 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 IRS4O14654 1257 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-202ENST00000470357 FOXN1O15353 648 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 SURF6O75683 361 aaKnown RBP8.15□□□□□ -1.1
VAMP3-202ENST00000470357 SMPD1P17405 629 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 GTF2E1P29083 439 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-202ENST00000470357 FOXO4P98177 505 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 G3BP1Q13283 466 aaKnown RBP eCLIP8.15□□□□□ -1.1
VAMP3-202ENST00000470357 OS9Q13438 667 aaPredicted RBP8.15□□□□□ -1.1
VAMP3-202ENST00000470357 CCDC57Q2TAC2 916 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 TRAF7Q6Q0C0 670 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 LMBR1LQ6UX01 489 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 TPTE2Q6XPS3 522 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 FAM89AQ96GI7 184 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 COPRSQ9NQ92 184 aa8.15□□□□□ -1.1
VAMP3-202ENST00000470357 RIC1Q4ADV7 1423 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 RTL9Q8NET4 1388 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 MAGEB6P1A0A0J9YX57 407 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 LCE2BO14633 110 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 NPHP1O15259 732 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 NTSR2O95665 410 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 CSF1RP07333 972 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 CTSWP56202 376 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 IFIT5Q13325 482 aaKnown RBP8.14□□□□□ -1.11
VAMP3-202ENST00000470357 SLC10A5Q5PT55 438 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 SUSD4Q5VX71 490 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 SH3BP5LQ7L8J4 393 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 NBPF5PQ86XG9 351 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-202ENST00000470357 FAM174AQ8TBP5 190 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 GPKOWQ92917 476 aaPredicted RBP eCLIP8.14□□□□□ -1.11
VAMP3-202ENST00000470357 PRDM10Q9NQV6 1147 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 MKRN1Q9UHC7 482 aaKnown RBP8.14□□□□□ -1.11
VAMP3-202ENST00000470357 CHMP3Q9Y3E7 222 aa8.14□□□□□ -1.11
VAMP3-202ENST00000470357 NRXN2Q9P2S2 1712 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 ANKRD18BA2A2Z9 1011 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 EIF5BO60841 1220 aaKnown RBP8.13□□□□□ -1.11
VAMP3-202ENST00000470357 CIAO1O76071 339 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 RGS3P49796 1198 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 NFIXQ14938 502 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 CCDC152Q4G0S7 254 aa8.13□□□□□ -1.11
VAMP3-202ENST00000470357 TAF7LQ5H9L4 462 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms