RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 FAAP100Q0VG06 881 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 RASA3Q14644 834 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 LRRC14Q15048 493 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 FXNQ16595 210 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 RPS26P11Q5JNZ5 115 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 HOMER1Q86YM7 354 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 CELF2-AS1Q8N7Q2 184 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 FAM169BQ8N8A8 192 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 GATAD2BQ8WXI9 593 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 ABHD17AQ96GS6 310 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 SLC30A3Q99726 388 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 BHLHE41Q9C0J9 482 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 CCDC113Q9H0I3 377 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 ZNF576Q9H609 170 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 EFCC1Q9HA90 598 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 BRMS1Q9HCU9 246 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 ARID4BQ4LE39 1312 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 PDPK1O15530 556 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 BNIP3LO60238 219 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 ATP11AP98196 1134 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 MPP2Q14168 576 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 DDR2Q16832 855 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 MTERF2Q49AM1 385 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 CCDC84Q86UT8 332 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 Q8N3U1 123 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 OR6P1Q8NGX9 317 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 TRPM4Q8TD43 1214 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 UBE2OQ9C0C9 1292 aaKnown RBP5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 MUC3BQ9H195 1237 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 CLEC4MQ9H2X3 399 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 METTL14Q9HCE5 456 aaKnown RBP5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 MBIPQ9NS73 344 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 CYP8B1Q9UNU6 501 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 MAPK8IP1Q9UQF2 711 aa5.2□□□□□ -1.58
HMGB1P25-201ENST00000468402 IGF1RP08069 1367 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 ESYT3A0FGR9 886 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 BCRP11274 1271 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 IMPDH2P12268 514 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 NME2P22392 152 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 GIPRP48546 466 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 CLCQ05315 142 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 PCDH1Q08174 1060 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 PCSK7Q16549 785 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 PLEKHG4Q58EX7 1191 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 LLGL2Q6P1M3 1020 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 REC114Q7Z4M0 266 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 SULF2Q8IWU5 870 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 LILRB2Q8N423 598 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 DDX54Q8TDD1 881 aaKnown RBP5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 BSNDQ8WZ55 320 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 PLD4Q96BZ4 506 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 POP1Q99575 1024 aaKnown RBP5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 EMILIN2Q9BXX0 1053 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 KANSL2Q9H9L4 492 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 PCDH12Q9NPG4 1184 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 PFDN2Q9UHV9 154 aa5.19□□□□□ -1.58
HMGB1P25-201ENST00000468402 SENP3-EIF4A1A0A087X0R7 540 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 NFKBIEO00221 500 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 GRIN3BO60391 1043 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 CPB1P15086 417 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 MX2P20592 715 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 ARNTP27540 789 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 GYS2P54840 703 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 GRIN3AQ8TCU5 1115 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 PSMG3-AS1Q96PY0 264 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 LRRC3Q9BY71 257 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 LACRTQ9GZZ8 138 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 TNKS2Q9H2K2 1166 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 DNAJB12Q9NXW2 375 aaKnown RBP5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 PHF24Q9UPV7 400 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 PRKAB1Q9Y478 270 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 PCDHB14Q9Y5E9 798 aa5.18□□□□□ -1.58
HMGB1P25-201ENST00000468402 FAM221AA4D161 298 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 CILPO75339 1184 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 PTPRAP18433 802 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 BMP6P22004 513 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 BAG6P46379 1132 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 GPLD1P80108 840 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 RASGRF1Q13972 1273 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 DBN1Q16643 649 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 ARSHQ5FYA8 562 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 FAM35AQ86V20 835 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 REXO1Q8N1G1 1221 aaKnown RBP5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 GTPBP3Q969Y2 492 aaKnown RBP5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 ACSBG1Q96GR2 724 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 BRINP2Q9C0B6 783 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 MKL2Q9ULH7 1088 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 KDM2BQ8NHM5 1336 aa5.17□□□□□ -1.58
HMGB1P25-201ENST00000468402 ZBTB42B2RXF5 422 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 GJB6O95452 261 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 THBS1P07996 1170 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 HOXD8P13378 290 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 FGFR3P22607 806 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 CDC25BP30305 580 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 CABP4P57796 275 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 SSRP1Q08945 709 aaKnown RBP5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 MLECQ14165 292 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 ZNF423Q2M1K9 1284 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 RASIP1Q5U651 963 aa5.16□□□□□ -1.58
HMGB1P25-201ENST00000468402 MAP1SQ66K74 1059 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms