RNA–Protein interactions for RNA: ENST00000467283.5

PTPN7-206, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-206	ENST00000467283	CETP	P11597	493 aa		14.01	□□□□□ -0.17
PTPN7-206	ENST00000467283	INPP5B	P32019	993 aa		14.01	□□□□□ -0.17
PTPN7-206	ENST00000467283	LACTB	P83111	547 aa	Predicted RBP	14.01	□□□□□ -0.17
PTPN7-206	ENST00000467283	NFIA	Q12857	509 aa		14.01	□□□□□ -0.17
PTPN7-206	ENST00000467283	C17orf99	Q6UX52	265 aa		14.01	□□□□□ -0.17
PTPN7-206	ENST00000467283	KCNH4	Q9UQ05	1017 aa		14.01	□□□□□ -0.17
PTPN7-206	ENST00000467283	DAGLA	Q9Y4D2	1042 aa		14.01	□□□□□ -0.17
PTPN7-206	ENST00000467283	IFIT1	P09914	478 aa	Known RBP	14	□□□□□ -0.17
PTPN7-206	ENST00000467283	PRDX5	P30044	214 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	PPAT	Q06203	517 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	SLFN5	Q08AF3	891 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	SNAPC2	Q13487	334 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	DIXDC1	Q155Q3	683 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	CDC42EP5	Q6NZY7	148 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	FAM151A	Q8WW52	585 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	LPIN2	Q92539	896 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	GCC1	Q96CN9	775 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	FAM198A	Q9UFP1	575 aa		14	□□□□□ -0.17
PTPN7-206	ENST00000467283	SALL1	Q9NSC2	1324 aa		13.99	□□□□□ -0.17
PTPN7-206	ENST00000467283		E9PSI1	815 aa		13.99	□□□□□ -0.17
PTPN7-206	ENST00000467283	FRAT2	O75474	233 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN7-206	ENST00000467283	SLC9C1	Q4G0N8	1177 aa		13.99	□□□□□ -0.17
PTPN7-206	ENST00000467283	NOL9	Q5SY16	702 aa	Known RBP	13.99	□□□□□ -0.17
PTPN7-206	ENST00000467283	MIGA2	Q7L4E1	593 aa		13.99	□□□□□ -0.17
PTPN7-206	ENST00000467283	TRMT2A	Q8IZ69	625 aa	Known RBP	13.99	□□□□□ -0.17
PTPN7-206	ENST00000467283	WDR66	Q8TBY9	1149 aa		13.99	□□□□□ -0.17
PTPN7-206	ENST00000467283	ZNF341	Q9BYN7	854 aa		13.99	□□□□□ -0.17
PTPN7-206	ENST00000467283	CIAO1	O76071	339 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	SLC5A1	P13866	664 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	ALDH1L2	Q3SY69	923 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	DCAF15	Q66K64	600 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	ANKRD23	Q86SG2	305 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	ZFPM1	Q8IX07	1006 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	SH3TC2	Q8TF17	1288 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	SHISA4	Q96DD7	197 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	HOOK2	Q96ED9	719 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	TMOD2	Q9NZR1	351 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	DOCK2	Q92608	1830 aa		13.98	□□□□□ -0.17
PTPN7-206	ENST00000467283	PHF20L1	A8MW92	1017 aa		13.97	□□□□□ -0.17
PTPN7-206	ENST00000467283	GPAT2	Q6NUI2	795 aa		13.97	□□□□□ -0.17
PTPN7-206	ENST00000467283	CDCA7L	Q96GN5	454 aa		13.97	□□□□□ -0.17
PTPN7-206	ENST00000467283	TRIM47	Q96LD4	638 aa		13.97	□□□□□ -0.17
PTPN7-206	ENST00000467283	FBXO3	Q9UK99	471 aa		13.97	□□□□□ -0.17
PTPN7-206	ENST00000467283	PHIP	Q8WWQ0	1821 aa		13.97	□□□□□ -0.17
PTPN7-206	ENST00000467283	GAK	O14976	1311 aa		13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	GNRH1	P01148	92 aa		13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	PHKA1	P46020	1223 aa		13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	FXR1	P51114	621 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	TCP10	Q12799	353 aa		13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	ARHGEF6	Q15052	776 aa		13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	SH3BP5L	Q7L8J4	393 aa		13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	NBPF11	Q86T75	865 aa		13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	TMEM106C	Q9BVX2	250 aa		13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	CPA4	Q9UI42	421 aa		13.96	□□□□□ -0.17
PTPN7-206	ENST00000467283	PDHX	O00330	501 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	BCR	P11274	1271 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	PRMT2	P55345	433 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	MAP3K10	Q02779	954 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	ATP2B3	Q16720	1220 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	UBE2Q1	Q7Z7E8	422 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	IDI2	Q9BXS1	227 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	SIL1	Q9H173	461 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	SRRD	Q9UH36	339 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	PTPRF	P10586	1907 aa		13.95	□□□□□ -0.18
PTPN7-206	ENST00000467283	SEMA3E	O15041	775 aa		13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	SLURP2	P0DP57	97 aa		13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	OSBP	P22059	807 aa		13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	ADORA1	P30542	326 aa		13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	MTFR1	Q15390	333 aa		13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	ZNF384	Q8TF68	577 aa		13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	PA2G4	Q9UQ80	394 aa	Known RBP	13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	LAMA3	Q16787	3333 aa		13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	MYH2	Q9UKX2	1941 aa		13.94	□□□□□ -0.18
PTPN7-206	ENST00000467283	PDS5A	Q29RF7	1337 aa	Known RBP	13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	MGAM	O43451	1857 aa		13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	DOCK1	Q14185	1865 aa		13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	MYC	P01106	439 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	LDHB	P07195	334 aa	Known RBP	13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	PSMC4	P43686	418 aa		13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	COPRS	Q9NQ92	184 aa		13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	DDX4	Q9NQI0	724 aa	Known RBP	13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	SMC4	Q9NTJ3	1288 aa		13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	USP40	Q9NVE5	1235 aa		13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283	COLQ	Q9Y215	455 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN7-206	ENST00000467283		A0A0G2JLL6	359 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	CXCL11	O14625	94 aa		13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	WDHD1	O75717	1129 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	UBTFL1	P0CB47	393 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	IL15	P40933	162 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	RGS3	P49796	1198 aa		13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	RASGRF1	Q13972	1273 aa		13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	KIF22	Q14807	665 aa		13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	SLC4A8	Q2Y0W8	1093 aa		13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	CCDC102B	Q68D86	513 aa		13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	FAM163A	Q96GL9	167 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	CEP126	Q9P2H0	1117 aa		13.92	□□□□□ -0.18
PTPN7-206	ENST00000467283	DENND2A	Q9ULE3	1009 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms