RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ZNF532Q9HCE3 1301 aa19.33■□□□□ 0.69
GPC1-207ENST00000466624 RNF113AO15541 343 aaKnown RBP19.33■□□□□ 0.68
GPC1-207ENST00000466624 BTDP43251 543 aa19.33■□□□□ 0.68
GPC1-207ENST00000466624 PPP4CP60510 307 aa19.33■□□□□ 0.68
GPC1-207ENST00000466624 EAPPQ56P03 285 aaPredicted RBP19.33■□□□□ 0.68
GPC1-207ENST00000466624 BMP2KLQ5H9B9 411 aa19.33■□□□□ 0.68
GPC1-207ENST00000466624 ADGRA1Q86SQ6 560 aa19.33■□□□□ 0.68
GPC1-207ENST00000466624 SKAP1Q86WV1 359 aa19.33■□□□□ 0.68
GPC1-207ENST00000466624 RILPL2Q969X0 211 aa19.33■□□□□ 0.68
GPC1-207ENST00000466624 NOL10Q9BSC4 688 aaKnown RBP19.33■□□□□ 0.68
GPC1-207ENST00000466624 PCDHAC2Q9Y5I4 1007 aa19.33■□□□□ 0.68
GPC1-207ENST00000466624 BAG3O95817 575 aa19.32■□□□□ 0.68
GPC1-207ENST00000466624 SPDYE2Q495Y8 402 aa19.32■□□□□ 0.68
GPC1-207ENST00000466624 PLCG2P16885 1265 aa19.31■□□□□ 0.68
GPC1-207ENST00000466624 SDSP20132 328 aa19.31■□□□□ 0.68
GPC1-207ENST00000466624 FKBP1CQ5VVH2 108 aa19.31■□□□□ 0.68
GPC1-207ENST00000466624 APPBP2Q92624 585 aa19.31■□□□□ 0.68
GPC1-207ENST00000466624 GGA3Q9NZ52 723 aa19.31■□□□□ 0.68
GPC1-207ENST00000466624 ZNF70Q9UC06 446 aaPredicted RBP19.31■□□□□ 0.68
GPC1-207ENST00000466624 HIP1O00291 1037 aa19.3■□□□□ 0.68
GPC1-207ENST00000466624 POTEIP0CG38 1075 aa19.3■□□□□ 0.68
GPC1-207ENST00000466624 POTEJP0CG39 1038 aa19.3■□□□□ 0.68
GPC1-207ENST00000466624 ANGEL2Q5VTE6 544 aaKnown RBP19.3■□□□□ 0.68
GPC1-207ENST00000466624 CDC42EP5Q6NZY7 148 aa19.3■□□□□ 0.68
GPC1-207ENST00000466624 APOBEC3FQ8IUX4 373 aaKnown RBP19.3■□□□□ 0.68
GPC1-207ENST00000466624 TDRD3Q9H7E2 651 aaKnown RBP19.3■□□□□ 0.68
GPC1-207ENST00000466624 TMOD2Q9NZR1 351 aa19.3■□□□□ 0.68
GPC1-207ENST00000466624 TOMM70O94826 608 aa19.29■□□□□ 0.68
GPC1-207ENST00000466624 RHBDL3P58872 404 aa19.29■□□□□ 0.68
GPC1-207ENST00000466624 ZMYM1Q5SVZ6 1142 aa19.29■□□□□ 0.68
GPC1-207ENST00000466624 DCPSQ96C86 337 aaKnown RBP19.29■□□□□ 0.68
GPC1-207ENST00000466624 RIOK1Q9BRS2 568 aaKnown RBP19.29■□□□□ 0.68
GPC1-207ENST00000466624 USP40Q9NVE5 1235 aa19.29■□□□□ 0.68
GPC1-207ENST00000466624 AATFQ9NY61 560 aaKnown RBP eCLIP19.29■□□□□ 0.68
GPC1-207ENST00000466624 ASTN2O75129 1339 aaPredicted RBP19.28■□□□□ 0.68
GPC1-207ENST00000466624 MAGEB6P1A0A0J9YX57 407 aa19.28■□□□□ 0.68
GPC1-207ENST00000466624 NPM3O75607 178 aaKnown RBP19.28■□□□□ 0.68
GPC1-207ENST00000466624 TNFAIP1Q13829 316 aa19.28■□□□□ 0.68
GPC1-207ENST00000466624 CHADLQ6NUI6 762 aa19.28■□□□□ 0.68
GPC1-207ENST00000466624 RBM46Q8TBY0 533 aaKnown RBP19.28■□□□□ 0.68
GPC1-207ENST00000466624 IDI2Q9BXS1 227 aa19.28■□□□□ 0.68
GPC1-207ENST00000466624 CLEC11AQ9Y240 323 aa19.28■□□□□ 0.68
GPC1-207ENST00000466624 CLRN2A0PK11 232 aa19.27■□□□□ 0.68
GPC1-207ENST00000466624 CHGBP05060 677 aa19.27■□□□□ 0.68
GPC1-207ENST00000466624 FAM83AQ86UY5 434 aa19.27■□□□□ 0.68
GPC1-207ENST00000466624 MIGA1Q8NAN2 632 aa19.27■□□□□ 0.68
GPC1-207ENST00000466624 OSBP2Q969R2 916 aa19.27■□□□□ 0.68
GPC1-207ENST00000466624 PUS7LQ9H0K6 701 aaKnown RBP19.27■□□□□ 0.68
GPC1-207ENST00000466624 HELLSQ9NRZ9 838 aa19.27■□□□□ 0.68
GPC1-207ENST00000466624 PPP2R3BQ9Y5P8 575 aa19.27■□□□□ 0.68
GPC1-207ENST00000466624 TNNI2P48788 182 aa19.26■□□□□ 0.67
GPC1-207ENST00000466624 DYNLL1P63167 89 aaKnown RBP19.26■□□□□ 0.67
GPC1-207ENST00000466624 SLFNL1Q499Z3 407 aa19.26■□□□□ 0.67
GPC1-207ENST00000466624 CDC37L1Q7L3B6 337 aa19.26■□□□□ 0.67
GPC1-207ENST00000466624 SMC1BQ8NDV3 1235 aa19.26■□□□□ 0.67
GPC1-207ENST00000466624 SH3RF3Q8TEJ3 882 aaPredicted RBP19.26■□□□□ 0.67
GPC1-207ENST00000466624 AIDAQ96BJ3 306 aa19.26■□□□□ 0.67
GPC1-207ENST00000466624 VEZTQ9HBM0 779 aa19.26■□□□□ 0.67
GPC1-207ENST00000466624 RPAP1Q9BWH6 1393 aaPredicted RBP19.26■□□□□ 0.67
GPC1-207ENST00000466624 NAV1Q8NEY1 1877 aa19.26■□□□□ 0.67
GPC1-207ENST00000466624 DDX60LQ5H9U9 1706 aaKnown RBP19.25■□□□□ 0.67
GPC1-207ENST00000466624 COL2A1P02458 1487 aaPredicted RBP19.25■□□□□ 0.67
GPC1-207ENST00000466624 ENTPD3O75355 529 aa19.25■□□□□ 0.67
GPC1-207ENST00000466624 WDHD1O75717 1129 aaPredicted RBP19.25■□□□□ 0.67
GPC1-207ENST00000466624 SULF1Q8IWU6 871 aa19.25■□□□□ 0.67
GPC1-207ENST00000466624 TEX11Q8IYF3 940 aa19.25■□□□□ 0.67
GPC1-207ENST00000466624 DIAPH3Q9NSV4 1193 aa19.25■□□□□ 0.67
GPC1-207ENST00000466624 MYH1P12882 1939 aa19.25■□□□□ 0.67
GPC1-207ENST00000466624 TRPM7Q96QT4 1865 aa19.24■□□□□ 0.67
GPC1-207ENST00000466624 MBD4O95243 580 aa19.24■□□□□ 0.67
GPC1-207ENST00000466624 MAP1SQ66K74 1059 aaPredicted RBP19.24■□□□□ 0.67
GPC1-207ENST00000466624 KRT26Q7Z3Y9 468 aa19.24■□□□□ 0.67
GPC1-207ENST00000466624 LCORLQ8N3X6 602 aa19.24■□□□□ 0.67
GPC1-207ENST00000466624 CRNKL1Q9BZJ0 848 aaKnown RBP19.24■□□□□ 0.67
GPC1-207ENST00000466624 CNTNAP1P78357 1384 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 GNAT2P19087 354 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 CACNB3P54284 484 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 FSTL1Q12841 308 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 NFIAQ12857 509 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 NMIQ13287 307 aaPredicted RBP19.23■□□□□ 0.67
GPC1-207ENST00000466624 MCMDC2Q4G0Z9 681 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 FAM151AQ8WW52 585 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 FAM227BQ96M60 508 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 STRBPQ96SI9 672 aaKnown RBP19.23■□□□□ 0.67
GPC1-207ENST00000466624 DEFB129Q9H1M3 183 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 ARMT1Q9H993 441 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 FAM198AQ9UFP1 575 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 RAD50Q92878 1312 aa19.23■□□□□ 0.67
GPC1-207ENST00000466624 A0A0D9SFI3 127 aa19.22■□□□□ 0.67
GPC1-207ENST00000466624 TCP10L2B9ZVM9 353 aa19.22■□□□□ 0.67
GPC1-207ENST00000466624 M0R2C6 588 aa19.22■□□□□ 0.67
GPC1-207ENST00000466624 GPAA1O43292 621 aa19.22■□□□□ 0.67
GPC1-207ENST00000466624 CHMLP26374 656 aa19.22■□□□□ 0.67
GPC1-207ENST00000466624 SEC62Q99442 399 aaKnown RBP19.22■□□□□ 0.67
GPC1-207ENST00000466624 ATRNL1Q5VV63 1379 aa19.21■□□□□ 0.67
GPC1-207ENST00000466624 ITGBL1O95965 494 aaPredicted RBP19.21■□□□□ 0.67
GPC1-207ENST00000466624 MFAP1P55081 439 aaKnown RBP19.21■□□□□ 0.67
GPC1-207ENST00000466624 RASA3Q14644 834 aa19.21■□□□□ 0.67
GPC1-207ENST00000466624 USP48Q86UV5 1035 aa19.21■□□□□ 0.67
GPC1-207ENST00000466624 TGFBRAP1Q8WUH2 860 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms