RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 ZBTB22O15209 634 aa18.47■□□□□ 0.55
MRPL55-225ENST00000465268 RGS19P49795 217 aa18.47■□□□□ 0.55
MRPL55-225ENST00000465268 INHBEP58166 350 aa18.47■□□□□ 0.55
MRPL55-225ENST00000465268 TCP10Q12799 353 aa18.47■□□□□ 0.55
MRPL55-225ENST00000465268 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
MRPL55-225ENST00000465268 ZKSCAN4Q969J2 545 aaPredicted RBP18.47■□□□□ 0.55
MRPL55-225ENST00000465268 TMOD2Q9NZR1 351 aa18.47■□□□□ 0.55
MRPL55-225ENST00000465268 CAP1Q01518 475 aa18.46■□□□□ 0.55
MRPL55-225ENST00000465268 POLA2Q14181 598 aa18.46■□□□□ 0.55
MRPL55-225ENST00000465268 NOM1Q5C9Z4 860 aaKnown RBP18.46■□□□□ 0.55
MRPL55-225ENST00000465268 ZNF384Q8TF68 577 aa18.46■□□□□ 0.55
MRPL55-225ENST00000465268 BRI3BPQ8WY22 251 aa18.46■□□□□ 0.55
MRPL55-225ENST00000465268 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
MRPL55-225ENST00000465268 USP40Q9NVE5 1235 aa18.46■□□□□ 0.55
MRPL55-225ENST00000465268 AKAP11Q9UKA4 1901 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 FKTNO75072 461 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 SLURP2P0DP57 97 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 CRHR2Q13324 411 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 FAM151AQ8WW52 585 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 OTUD5Q96G74 571 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 WRNIP1Q96S55 665 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 HMG20BQ9P0W2 317 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 ABCF2Q9UG63 623 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 HPS5Q9UPZ3 1129 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 AKAP2Q9Y2D5 859 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 ZBED9Q6R2W3 1325 aa18.45■□□□□ 0.54
MRPL55-225ENST00000465268 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
MRPL55-225ENST00000465268 ALDH1A1P00352 501 aa18.44■□□□□ 0.54
MRPL55-225ENST00000465268 INPP5BP32019 993 aa18.44■□□□□ 0.54
MRPL55-225ENST00000465268 TBC1D9Q6ZT07 1266 aa18.44■□□□□ 0.54
MRPL55-225ENST00000465268 GAKO14976 1311 aa18.44■□□□□ 0.54
MRPL55-225ENST00000465268 RPAP1Q9BWH6 1393 aaPredicted RBP18.43■□□□□ 0.54
MRPL55-225ENST00000465268 SPDYE5A6NIY4 337 aa18.43■□□□□ 0.54
MRPL55-225ENST00000465268 SOX10P56693 466 aa18.43■□□□□ 0.54
MRPL55-225ENST00000465268 ATP8B2P98198 1209 aa18.43■□□□□ 0.54
MRPL55-225ENST00000465268 G3BP1Q13283 466 aaKnown RBP eCLIP18.43■□□□□ 0.54
MRPL55-225ENST00000465268 MVPQ14764 893 aaKnown RBP18.43■□□□□ 0.54
MRPL55-225ENST00000465268 SH3BP5LQ7L8J4 393 aa18.43■□□□□ 0.54
MRPL55-225ENST00000465268 FAM43AQ8N2R8 423 aa18.43■□□□□ 0.54
MRPL55-225ENST00000465268 SSH3Q8TE77 659 aa18.43■□□□□ 0.54
MRPL55-225ENST00000465268 CSADQ9Y600 493 aa18.43■□□□□ 0.54
MRPL55-225ENST00000465268 OTOFQ9HC10 1997 aa18.42■□□□□ 0.54
MRPL55-225ENST00000465268 CCL15-CCL14A0A0B4J2E2 113 aa18.42■□□□□ 0.54
MRPL55-225ENST00000465268 CCL15Q16663 113 aa18.42■□□□□ 0.54
MRPL55-225ENST00000465268 ITPRIPQ8IWB1 547 aa18.42■□□□□ 0.54
MRPL55-225ENST00000465268 DDX4Q9NQI0 724 aaKnown RBP18.42■□□□□ 0.54
MRPL55-225ENST00000465268 PDS5AQ29RF7 1337 aaKnown RBP18.42■□□□□ 0.54
MRPL55-225ENST00000465268 IRF6O14896 467 aa18.41■□□□□ 0.54
MRPL55-225ENST00000465268 MCAMP43121 646 aa18.41■□□□□ 0.54
MRPL55-225ENST00000465268 RGS3P49796 1198 aa18.41■□□□□ 0.54
MRPL55-225ENST00000465268 MECOMQ03112 1051 aa18.41■□□□□ 0.54
MRPL55-225ENST00000465268 DZIP1Q86YF9 867 aaKnown RBP18.41■□□□□ 0.54
MRPL55-225ENST00000465268 FTSJ3Q8IY81 847 aaKnown RBP18.41■□□□□ 0.54
MRPL55-225ENST00000465268 PANK1Q8TE04 598 aa18.41■□□□□ 0.54
MRPL55-225ENST00000465268 ZNF341Q9BYN7 854 aa18.41■□□□□ 0.54
MRPL55-225ENST00000465268 ZNF112Q9UJU3 913 aa18.41■□□□□ 0.54
MRPL55-225ENST00000465268 RFX7Q2KHR2 1363 aa18.41■□□□□ 0.54
MRPL55-225ENST00000465268 HTTP42858 3142 aa18.4■□□□□ 0.54
MRPL55-225ENST00000465268 WDHD1O75717 1129 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-225ENST00000465268 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-225ENST00000465268 BTDP43251 543 aa18.4■□□□□ 0.54
MRPL55-225ENST00000465268 GTF2A2P52657 109 aa18.4■□□□□ 0.54
MRPL55-225ENST00000465268 ERO1BQ86YB8 467 aa18.4■□□□□ 0.54
MRPL55-225ENST00000465268 ZGPATQ8N5A5 531 aaKnown RBP18.4■□□□□ 0.54
MRPL55-225ENST00000465268 SPATA5Q8NB90 893 aa18.4■□□□□ 0.54
MRPL55-225ENST00000465268 CD99L2Q8TCZ2 262 aa18.4■□□□□ 0.54
MRPL55-225ENST00000465268 FAM163AQ96GL9 167 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-225ENST00000465268 IDI2Q9BXS1 227 aa18.4■□□□□ 0.54
MRPL55-225ENST00000465268 ATRNL1Q5VV63 1379 aa18.4■□□□□ 0.54
MRPL55-225ENST00000465268 RHBDL3P58872 404 aa18.39■□□□□ 0.53
MRPL55-225ENST00000465268 MLLT1Q03111 559 aaPredicted RBP18.39■□□□□ 0.53
MRPL55-225ENST00000465268 PKN2Q16513 984 aaKnown RBP18.39■□□□□ 0.53
MRPL55-225ENST00000465268 TNNI3KQ59H18 835 aa18.39■□□□□ 0.53
MRPL55-225ENST00000465268 DCAF15Q66K64 600 aa18.39■□□□□ 0.53
MRPL55-225ENST00000465268 ERICH6Q7L0X2 663 aa18.39■□□□□ 0.53
MRPL55-225ENST00000465268 OTOP1Q7RTM1 612 aa18.39■□□□□ 0.53
MRPL55-225ENST00000465268 DBNDD2Q9BQY9 259 aa18.39■□□□□ 0.53
MRPL55-225ENST00000465268 FPGT-TNNI3KV9GXZ4 949 aa18.39■□□□□ 0.53
MRPL55-225ENST00000465268 DDTLA6NHG4 134 aaPredicted RBP18.38■□□□□ 0.53
MRPL55-225ENST00000465268 BTBD19C9JJ37 291 aa18.38■□□□□ 0.53
MRPL55-225ENST00000465268 SURF6O75683 361 aaKnown RBP18.38■□□□□ 0.53
MRPL55-225ENST00000465268 GORABQ5T7V8 394 aa18.38■□□□□ 0.53
MRPL55-225ENST00000465268 OTUD7BQ6GQQ9 843 aa18.38■□□□□ 0.53
MRPL55-225ENST00000465268 FBXO46Q6PJ61 603 aaPredicted RBP18.38■□□□□ 0.53
MRPL55-225ENST00000465268 NSUN4Q96CB9 384 aaKnown RBP18.38■□□□□ 0.53
MRPL55-225ENST00000465268 SNRKQ9NRH2 765 aa18.38■□□□□ 0.53
MRPL55-225ENST00000465268 TLR7Q9NYK1 1049 aaKnown RBP18.38■□□□□ 0.53
MRPL55-225ENST00000465268 TRIM17Q9Y577 477 aa18.38■□□□□ 0.53
MRPL55-225ENST00000465268 MROH7-TTC4A0A0A0MT08 1334 aa18.38■□□□□ 0.53
MRPL55-225ENST00000465268 GPR75-ASB3A0A0A6YYF3 556 aa18.37■□□□□ 0.53
MRPL55-225ENST00000465268 PHF20L1A8MW92 1017 aa18.37■□□□□ 0.53
MRPL55-225ENST00000465268 PPIL2Q13356 520 aa18.37■□□□□ 0.53
MRPL55-225ENST00000465268 PICALMQ13492 652 aa18.37■□□□□ 0.53
MRPL55-225ENST00000465268 SPTY2D1Q68D10 685 aaPredicted RBP18.37■□□□□ 0.53
MRPL55-225ENST00000465268 CEP85Q6P2H3 762 aa18.37■□□□□ 0.53
MRPL55-225ENST00000465268 HOOK2Q96ED9 719 aa18.37■□□□□ 0.53
MRPL55-225ENST00000465268 NOP58Q9Y2X3 529 aaKnown RBP18.37■□□□□ 0.53
MRPL55-225ENST00000465268 ENTPD3O75355 529 aa18.36■□□□□ 0.53
MRPL55-225ENST00000465268 MOGSQ13724 837 aa18.36■□□□□ 0.53
MRPL55-225ENST00000465268 TAF1CQ15572 869 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms