RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 IKBKEQ14164 716 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 CCDC85BQ15834 202 aaPredicted RBP3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 TRAPPC3LQ5T215 181 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 RASIP1Q5U651 963 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 C9orf131Q5VYM1 1079 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 GDF6Q6KF10 455 aaPredicted RBP3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 PRR23CQ6ZRP0 262 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 HS2ST1Q7LGA3 356 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 WFDC8Q8IUA0 241 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 MAP4K3Q8IVH8 894 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 GALNT11Q8NCW6 608 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 STK35Q8TDR2 534 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 MEGF10Q96KG7 1140 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 RHOVQ96L33 236 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 TMEM74Q96NL1 305 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 TRIM56Q9BRZ2 755 aaKnown RBP3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 PCMTD2Q9NV79 361 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 GGT7Q9UJ14 662 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 TTF2Q9UNY4 1162 aaKnown RBP3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 ADAMTS4O75173 837 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 FBXO24O75426 580 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 TFE3P19532 575 aaPredicted RBP3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 ARNTP27540 789 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 LIG3P49916 1009 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 IRAK1P51617 712 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 CABP4P57796 275 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 LMNB2Q03252 620 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 PPP2R3AQ06190 1150 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 C19orf57Q0VDD7 668 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 PWP1Q13610 501 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 TPTE2Q6XPS3 522 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 CCDC84Q86UT8 332 aaPredicted RBP3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 SLC51AQ86UW1 340 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 FBXO11Q86XK2 927 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 RELL1Q8IUW5 271 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 DMRTC2Q8IXT2 367 aaPredicted RBP3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 DZIP1LQ8IYY4 767 aaKnown RBP3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 KLHL23Q8NBE8 558 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 SLC43A3Q8NBI5 491 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 WFDC12Q8WWY7 111 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 KLHDC7BQ96G42 594 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 KRTAP4-5Q9BYR2 181 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 KBTBD4Q9NVX7 518 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 CYP8B1Q9UNU6 501 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 SYNGAP1Q96PV0 1343 aa3.17□□□□□ -1.9
NUCKS1-202ENST00000464938 FAM221AA4D161 298 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 ADAM11O75078 769 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 ERCC5P28715 1186 aaPredicted RBP3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 RANGAP1P46060 587 aaPredicted RBP3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 GJA8P48165 433 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 ZNF157P51786 506 aaPredicted RBP3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 RAC1P63000 192 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 AP3B2Q13367 1082 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 ZNF394Q53GI3 561 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 TTBK2Q6IQ55 1244 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 USP48Q86UV5 1035 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 SULF2Q8IWU5 870 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 ZNF654Q8IZM8 581 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 GMLQ99445 158 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 TINF2Q9BSI4 451 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 KRT82Q9NSB4 513 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 KCNK4Q9NYG8 393 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 ADAMTS1Q9UHI8 967 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 RNF114Q9Y508 228 aa3.16□□□□□ -1.9
NUCKS1-202ENST00000464938 MEGF11A6BM72 1044 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 TRIM37O94972 964 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 DLGAP3O95886 979 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 PF4P02776 101 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 CTSBP07858 339 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 GSTP1P09211 210 aaKnown RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 FSTP19883 344 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 SSTR4P31391 388 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 CD68P34810 354 aaPredicted RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 EIF4A3P38919 411 aaKnown RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 IREB2P48200 963 aaKnown RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 ARL4DP49703 201 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 GP2P55259 537 aaKnown RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 ZC3H6P61129 1189 aaKnown RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 PTPN11Q06124 597 aaPredicted RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 CAMK2GQ13555 558 aaPredicted RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 PCNX4Q63HM2 1172 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 FAM117BQ6P1L5 589 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 FBXL19Q6PCT2 694 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 TXNDC11Q6PKC3 985 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 TRIM42Q8IWZ5 723 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 GRIN3AQ8TCU5 1115 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 DDX54Q8TDD1 881 aaKnown RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 RASGRP4Q8TDF6 673 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 ZNF296Q8WUU4 475 aaPredicted RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 GAL3ST3Q96A11 431 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 EAF1Q96JC9 268 aaPredicted RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 NT5C1AQ9BXI3 368 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 EMILIN2Q9BXX0 1053 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 LRRC3Q9BY71 257 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 GPN3Q9UHW5 284 aaPredicted RBP3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 TLR6Q9Y2C9 796 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 SAMM50Q9Y512 469 aa3.15□□□□□ -1.91
NUCKS1-202ENST00000464938 ROBO2Q9HCK4 1378 aa3.14□□□□□ -1.91
NUCKS1-202ENST00000464938 LOC100289279A0A1B0GTE1 492 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms