RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CCDC151A5D8V7 595 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 M0R2C6 588 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 PRC1O43663 620 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 MYL6BP14649 208 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 IL15P40933 162 aaPredicted RBP8.39□□□□□ -1.07
USP48-206ENST00000464577 GNG11P61952 73 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 PTPAQ15257 358 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 IMMTQ16891 758 aaKnown RBP8.39□□□□□ -1.07
USP48-206ENST00000464577 CYB5RLQ6IPT4 315 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 ATG9AQ7Z3C6 839 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 FUT8Q9BYC5 575 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 SLC52A2Q9HAB3 445 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 INTS13Q9NVM9 706 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 PLEKHG2Q9H7P9 1386 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 KDM6AO15550 1401 aaPredicted RBP8.38□□□□□ -1.07
USP48-206ENST00000464577 LAMB4A4D0S4 1761 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 TMEM232C9JQI7 657 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 POTEB2H3BUK9 544 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 MAP2K7O14733 419 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 CPLX1O14810 134 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 CUTAO60888 179 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 ZFYP08048 801 aaPredicted RBP8.38□□□□□ -1.07
USP48-206ENST00000464577 TXLNAP40222 546 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 TUBB4BP68371 445 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 ST5P78524 1137 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 TUBB2AQ13885 445 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 SHC4Q6S5L8 630 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 KRBA2Q6ZNG9 492 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 CHST3Q7LGC8 479 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 GOLGA5Q8TBA6 731 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 IPO4Q8TEX9 1081 aaKnown RBP8.38□□□□□ -1.07
USP48-206ENST00000464577 HNRNPLLQ8WVV9 542 aaKnown RBP8.38□□□□□ -1.07
USP48-206ENST00000464577 WDR24Q96S15 920 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 TUBB2BQ9BVA1 445 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 PARD6BQ9BYG5 372 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 ZMYM6O95789 1325 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 ABCC12Q96J65 1359 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 A0A087WZG4 1122 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 CDKL5O76039 1030 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 CIAO1O76071 339 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 IFIT1P09914 478 aaKnown RBP8.38□□□□□ -1.07
USP48-206ENST00000464577 ANTXR2P58335 489 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 FOXO4P98177 505 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 PNOCQ13519 176 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 ZSCAN26Q16670 478 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 SPECC1LQ69YQ0 1117 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 TTLL5Q6EMB2 1281 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 METTL16Q86W50 562 aaKnown RBP8.38□□□□□ -1.07
USP48-206ENST00000464577 THEMISQ8N1K5 641 aaPredicted RBP8.38□□□□□ -1.07
USP48-206ENST00000464577 TC2NQ8N9U0 490 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 NCOA7Q8NI08 942 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 GPHNQ9NQX3 736 aaPredicted RBP8.38□□□□□ -1.07
USP48-206ENST00000464577 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.38□□□□□ -1.07
USP48-206ENST00000464577 FANCLQ9NW38 375 aa8.38□□□□□ -1.07
USP48-206ENST00000464577 TJP1Q07157 1748 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 H7C1W4 665 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 FOXP2O15409 715 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 SNRPA1P09661 255 aaKnown RBP8.37□□□□□ -1.07
USP48-206ENST00000464577 ZNF18P17022 549 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 USP5P45974 858 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 LONRF2Q1L5Z9 754 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 CCDC102BQ68D86 513 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 LMBR1LQ6UX01 489 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 REM2Q8IYK8 340 aaPredicted RBP8.37□□□□□ -1.07
USP48-206ENST00000464577 PLBD2Q8NHP8 589 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 ENOX1Q8TC92 643 aaKnown RBP8.37□□□□□ -1.07
USP48-206ENST00000464577 OSBP2Q969R2 916 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 NEUROD6Q96NK8 337 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 MAP3K14Q99558 947 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 DACH1Q9UI36 760 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 HOOK1Q9UJC3 728 aaKnown RBP8.37□□□□□ -1.07
USP48-206ENST00000464577 GLI3P10071 1580 aa8.37□□□□□ -1.07
USP48-206ENST00000464577 GCP02774 474 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 MARCKSP29966 332 aaPredicted RBP8.36□□□□□ -1.07
USP48-206ENST00000464577 GOLGA8FQ08AF8 430 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 GOLGA8DPQ0D2H9 430 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 GNL2Q13823 731 aaKnown RBP8.36□□□□□ -1.07
USP48-206ENST00000464577 NT5DC1Q5TFE4 455 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 ISM2Q6H9L7 571 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 TOGARAM2Q6ZUX3 1019 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 SRGAP1Q7Z6B7 1085 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 VPS37DQ86XT2 251 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 MLKLQ8NB16 471 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 NFATC2IPQ8NCF5 419 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 DHX58Q96C10 678 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 RASSF4Q9H2L5 321 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 ATG3Q9NT62 314 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 PCDH10Q9P2E7 1040 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 RAB21Q9UL25 225 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 ECM29Q5VYK3 1845 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 EYA2O00167 538 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 RPS6KA5O75582 802 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 MDM2Q00987 491 aaPredicted RBP8.36□□□□□ -1.07
USP48-206ENST00000464577 SLC39A6Q13433 755 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 KRT40Q6A162 431 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 RALYLQ86SE5 291 aaKnown RBP8.36□□□□□ -1.07
USP48-206ENST00000464577 CEP112Q8N8E3 955 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 TRIML1Q8N9V2 468 aa8.36□□□□□ -1.07
USP48-206ENST00000464577 CCDC191Q8NCU4 936 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms