RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 RPAP1Q9BWH6 1393 aaPredicted RBP23.79■■□□□ 1.4
CCHCR1-210ENST00000464012 VGLL4Q14135 290 aa23.79■■□□□ 1.4
CCHCR1-210ENST00000464012 POLA2Q14181 598 aa23.79■■□□□ 1.4
CCHCR1-210ENST00000464012 FKBP1CQ5VVH2 108 aa23.79■■□□□ 1.4
CCHCR1-210ENST00000464012 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.79■■□□□ 1.4
CCHCR1-210ENST00000464012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.79■■□□□ 1.4
CCHCR1-210ENST00000464012 PANK1Q8TE04 598 aa23.79■■□□□ 1.4
CCHCR1-210ENST00000464012 CSADQ9Y600 493 aa23.79■■□□□ 1.4
CCHCR1-210ENST00000464012 MAP3K9P80192 1104 aa23.78■■□□□ 1.4
CCHCR1-210ENST00000464012 ATP8B2P98198 1209 aa23.78■■□□□ 1.4
CCHCR1-210ENST00000464012 PI16Q6UXB8 463 aa23.78■■□□□ 1.4
CCHCR1-210ENST00000464012 IFNL1Q8IU54 200 aa23.78■■□□□ 1.4
CCHCR1-210ENST00000464012 ZNF296Q8WUU4 475 aaPredicted RBP23.78■■□□□ 1.4
CCHCR1-210ENST00000464012 CNKSR2Q8WXI2 1034 aa23.78■■□□□ 1.4
CCHCR1-210ENST00000464012 USP40Q9NVE5 1235 aa23.78■■□□□ 1.4
CCHCR1-210ENST00000464012 PDS5AQ29RF7 1337 aaKnown RBP23.78■■□□□ 1.4
CCHCR1-210ENST00000464012 IGF2BP3O00425 579 aaKnown RBP eCLIP23.77■■□□□ 1.4
CCHCR1-210ENST00000464012 ZBTB7BO15156 539 aaPredicted RBP23.77■■□□□ 1.4
CCHCR1-210ENST00000464012 NFIAQ12857 509 aa23.77■■□□□ 1.4
CCHCR1-210ENST00000464012 SSH3Q8TE77 659 aa23.77■■□□□ 1.4
CCHCR1-210ENST00000464012 WRNIP1Q96S55 665 aa23.77■■□□□ 1.4
CCHCR1-210ENST00000464012 R3HDMLQ9H3Y0 253 aa23.77■■□□□ 1.4
CCHCR1-210ENST00000464012 MYO5AQ9Y4I1 1855 aaKnown RBP23.77■■□□□ 1.4
CCHCR1-210ENST00000464012 GPR25O00155 361 aa23.76■■□□□ 1.39
CCHCR1-210ENST00000464012 SURF6O75683 361 aaKnown RBP23.76■■□□□ 1.39
CCHCR1-210ENST00000464012 INHBEP58166 350 aa23.76■■□□□ 1.39
CCHCR1-210ENST00000464012 CTU1Q7Z7A3 348 aaKnown RBP23.76■■□□□ 1.39
CCHCR1-210ENST00000464012 FAM151AQ8WW52 585 aa23.76■■□□□ 1.39
CCHCR1-210ENST00000464012 HOOK2Q96ED9 719 aa23.76■■□□□ 1.39
CCHCR1-210ENST00000464012 HMG20BQ9P0W2 317 aa23.76■■□□□ 1.39
CCHCR1-210ENST00000464012 MAST2Q6P0Q8 1798 aa23.75■■□□□ 1.39
CCHCR1-210ENST00000464012 ZBTB22O15209 634 aa23.75■■□□□ 1.39
CCHCR1-210ENST00000464012 ALDH1A1P00352 501 aa23.75■■□□□ 1.39
CCHCR1-210ENST00000464012 DCAF15Q66K64 600 aa23.75■■□□□ 1.39
CCHCR1-210ENST00000464012 SPTY2D1Q68D10 685 aaPredicted RBP23.75■■□□□ 1.39
CCHCR1-210ENST00000464012 ERICH6Q7L0X2 663 aa23.75■■□□□ 1.39
CCHCR1-210ENST00000464012 MIGA2Q7L4E1 593 aa23.75■■□□□ 1.39
CCHCR1-210ENST00000464012 OTUD5Q96G74 571 aa23.75■■□□□ 1.39
CCHCR1-210ENST00000464012 ARID4AP29374 1257 aaPredicted RBP23.74■■□□□ 1.39
CCHCR1-210ENST00000464012 TNNI3KQ59H18 835 aa23.74■■□□□ 1.39
CCHCR1-210ENST00000464012 SPATA5Q8NB90 893 aa23.74■■□□□ 1.39
CCHCR1-210ENST00000464012 ZKSCAN4Q969J2 545 aaPredicted RBP23.74■■□□□ 1.39
CCHCR1-210ENST00000464012 FAM198AQ9UFP1 575 aa23.74■■□□□ 1.39
CCHCR1-210ENST00000464012 FPGT-TNNI3KV9GXZ4 949 aa23.74■■□□□ 1.39
CCHCR1-210ENST00000464012 GAKO14976 1311 aa23.74■■□□□ 1.39
CCHCR1-210ENST00000464012 MCAMP43121 646 aa23.73■■□□□ 1.39
CCHCR1-210ENST00000464012 TBC1D9Q6ZT07 1266 aa23.73■■□□□ 1.39
CCHCR1-210ENST00000464012 SLF2Q8IX21 1173 aa23.73■■□□□ 1.39
CCHCR1-210ENST00000464012 CFHR5Q9BXR6 569 aa23.73■■□□□ 1.39
CCHCR1-210ENST00000464012 ZNF341Q9BYN7 854 aa23.73■■□□□ 1.39
CCHCR1-210ENST00000464012 SNCAIPQ9Y6H5 919 aa23.73■■□□□ 1.39
CCHCR1-210ENST00000464012 BTDP43251 543 aa23.72■■□□□ 1.39
CCHCR1-210ENST00000464012 MECOMQ03112 1051 aa23.72■■□□□ 1.39
CCHCR1-210ENST00000464012 TTC39AQ5SRH9 613 aa23.72■■□□□ 1.39
CCHCR1-210ENST00000464012 DBNDD2Q9BQY9 259 aa23.72■■□□□ 1.39
CCHCR1-210ENST00000464012 MROH7-TTC4A0A0A0MT08 1334 aa23.72■■□□□ 1.39
CCHCR1-210ENST00000464012 FKTNO75072 461 aa23.71■■□□□ 1.39
CCHCR1-210ENST00000464012 UQCRFS1P1P0C7P4 283 aa23.71■■□□□ 1.39
CCHCR1-210ENST00000464012 RGS3P49796 1198 aa23.71■■□□□ 1.39
CCHCR1-210ENST00000464012 OTUD7BQ6GQQ9 843 aa23.71■■□□□ 1.39
CCHCR1-210ENST00000464012 CEP85Q6P2H3 762 aa23.71■■□□□ 1.39
CCHCR1-210ENST00000464012 ZFPM1Q8IX07 1006 aa23.71■■□□□ 1.39
CCHCR1-210ENST00000464012 PTPN18Q99952 460 aa23.71■■□□□ 1.39
CCHCR1-210ENST00000464012 GPR108Q9NPR9 543 aa23.71■■□□□ 1.39
CCHCR1-210ENST00000464012 RFX7Q2KHR2 1363 aa23.7■■□□□ 1.38
CCHCR1-210ENST00000464012 SPDYE5A6NIY4 337 aa23.7■■□□□ 1.38
CCHCR1-210ENST00000464012 INPP5BP32019 993 aa23.7■■□□□ 1.38
CCHCR1-210ENST00000464012 PICALMQ13492 652 aa23.7■■□□□ 1.38
CCHCR1-210ENST00000464012 NOM1Q5C9Z4 860 aaKnown RBP23.7■■□□□ 1.38
CCHCR1-210ENST00000464012 SNRKQ9NRH2 765 aa23.7■■□□□ 1.38
CCHCR1-210ENST00000464012 RAI14Q9P0K7 980 aa23.7■■□□□ 1.38
CCHCR1-210ENST00000464012 CCL15-CCL14A0A0B4J2E2 113 aa23.69■■□□□ 1.38
CCHCR1-210ENST00000464012 GTF2A2P52657 109 aa23.69■■□□□ 1.38
CCHCR1-210ENST00000464012 CRHR2Q13324 411 aa23.69■■□□□ 1.38
CCHCR1-210ENST00000464012 CCL15Q16663 113 aa23.69■■□□□ 1.38
CCHCR1-210ENST00000464012 ZSCAN29Q8IWY8 852 aaPredicted RBP23.69■■□□□ 1.38
CCHCR1-210ENST00000464012 ZNF384Q8TF68 577 aa23.69■■□□□ 1.38
CCHCR1-210ENST00000464012 BRI3BPQ8WY22 251 aa23.69■■□□□ 1.38
CCHCR1-210ENST00000464012 MS4A4AQ96JQ5 239 aa23.69■■□□□ 1.38
CCHCR1-210ENST00000464012 NOP58Q9Y2X3 529 aaKnown RBP23.69■■□□□ 1.38
CCHCR1-210ENST00000464012 CDK5RAP2Q96SN8 1893 aa23.68■■□□□ 1.38
CCHCR1-210ENST00000464012 TESPA1A2RU30 521 aaPredicted RBP23.68■■□□□ 1.38
CCHCR1-210ENST00000464012 MS4A1P11836 297 aa23.68■■□□□ 1.38
CCHCR1-210ENST00000464012 CCDC158Q5M9N0 1113 aa23.68■■□□□ 1.38
CCHCR1-210ENST00000464012 ERO1BQ86YB8 467 aa23.68■■□□□ 1.38
CCHCR1-210ENST00000464012 FAM163AQ96GL9 167 aaPredicted RBP23.68■■□□□ 1.38
CCHCR1-210ENST00000464012 IDI2Q9BXS1 227 aa23.68■■□□□ 1.38
CCHCR1-210ENST00000464012 COG6Q9Y2V7 657 aa23.68■■□□□ 1.38
CCHCR1-210ENST00000464012 DOCK1Q14185 1865 aa23.67■■□□□ 1.38
CCHCR1-210ENST00000464012 GSTO1P78417 241 aa23.67■■□□□ 1.38
CCHCR1-210ENST00000464012 NSUN4Q96CB9 384 aaKnown RBP23.67■■□□□ 1.38
CCHCR1-210ENST00000464012 DDX4Q9NQI0 724 aaKnown RBP23.67■■□□□ 1.38
CCHCR1-210ENST00000464012 TLR7Q9NYK1 1049 aaKnown RBP23.67■■□□□ 1.38
CCHCR1-210ENST00000464012 LRP2BPQ9P2M1 347 aa23.67■■□□□ 1.38
CCHCR1-210ENST00000464012 RCAN3Q9UKA8 241 aa23.67■■□□□ 1.38
CCHCR1-210ENST00000464012 EXOC6BQ9Y2D4 811 aa23.67■■□□□ 1.38
CCHCR1-210ENST00000464012 ENTPD3O75355 529 aa23.66■■□□□ 1.38
CCHCR1-210ENST00000464012 WDHD1O75717 1129 aaPredicted RBP23.66■■□□□ 1.38
CCHCR1-210ENST00000464012 CCDC8Q9H0W5 538 aaPredicted RBP23.66■■□□□ 1.38
CCHCR1-210ENST00000464012 GPR75-ASB3A0A0A6YYF3 556 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms