RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 LDHCP07864 332 aa23.01■■□□□ 1.27
LMNB1-204ENST00000463908 GSTO1P78417 241 aa23.01■■□□□ 1.27
LMNB1-204ENST00000463908 NAA16Q6N069 864 aaPredicted RBP23.01■■□□□ 1.27
LMNB1-204ENST00000463908 SLF2Q8IX21 1173 aa23.01■■□□□ 1.27
LMNB1-204ENST00000463908 CCDC136Q96JN2 1154 aa23.01■■□□□ 1.27
LMNB1-204ENST00000463908 MYO5AQ9Y4I1 1855 aaKnown RBP23■■□□□ 1.27
LMNB1-204ENST00000463908 MAP3K12Q12852 859 aa23■■□□□ 1.27
LMNB1-204ENST00000463908 CENPQQ7L2Z9 268 aaPredicted RBP23■■□□□ 1.27
LMNB1-204ENST00000463908 SULF1Q8IWU6 871 aa23■■□□□ 1.27
LMNB1-204ENST00000463908 MAGEB6Q8N7X4 407 aa23■■□□□ 1.27
LMNB1-204ENST00000463908 OSBPL3Q9H4L5 887 aa23■■□□□ 1.27
LMNB1-204ENST00000463908 USP40Q9NVE5 1235 aa23■■□□□ 1.27
LMNB1-204ENST00000463908 CHGBP05060 677 aa22.99■■□□□ 1.27
LMNB1-204ENST00000463908 CYP7A1P22680 504 aa22.99■■□□□ 1.27
LMNB1-204ENST00000463908 BTDP43251 543 aa22.99■■□□□ 1.27
LMNB1-204ENST00000463908 CACNB3P54284 484 aa22.99■■□□□ 1.27
LMNB1-204ENST00000463908 COL13A1Q5TAT6 717 aaPredicted RBP22.99■■□□□ 1.27
LMNB1-204ENST00000463908 VEZTQ9HBM0 779 aa22.99■■□□□ 1.27
LMNB1-204ENST00000463908 POLR2AP24928 1970 aaKnown RBP22.99■■□□□ 1.27
LMNB1-204ENST00000463908 PDE6AP16499 860 aa22.98■■□□□ 1.27
LMNB1-204ENST00000463908 RHBDL3P58872 404 aa22.98■■□□□ 1.27
LMNB1-204ENST00000463908 SLFNL1Q499Z3 407 aa22.98■■□□□ 1.27
LMNB1-204ENST00000463908 SLC9C2Q5TAH2 1124 aa22.98■■□□□ 1.27
LMNB1-204ENST00000463908 PRAMEF18Q5VWM3 479 aa22.98■■□□□ 1.27
LMNB1-204ENST00000463908 APOBEC3FQ8IUX4 373 aaKnown RBP22.98■■□□□ 1.27
LMNB1-204ENST00000463908 PPP4R2Q9NY27 417 aa22.98■■□□□ 1.27
LMNB1-204ENST00000463908 TCRBV5S4A2TA0A5A2 114 aa22.97■■□□□ 1.27
LMNB1-204ENST00000463908 TCP10L2B9ZVM9 353 aa22.97■■□□□ 1.27
LMNB1-204ENST00000463908 PPP4CP60510 307 aa22.97■■□□□ 1.27
LMNB1-204ENST00000463908 CST9Q5W186 159 aa22.97■■□□□ 1.27
LMNB1-204ENST00000463908 DEFB129Q9H1M3 183 aa22.97■■□□□ 1.27
LMNB1-204ENST00000463908 MYH2Q9UKX2 1941 aa22.96■■□□□ 1.27
LMNB1-204ENST00000463908 NFIAQ12857 509 aa22.96■■□□□ 1.27
LMNB1-204ENST00000463908 RASA3Q14644 834 aa22.96■■□□□ 1.27
LMNB1-204ENST00000463908 KBTBD3Q8NAB2 608 aa22.96■■□□□ 1.27
LMNB1-204ENST00000463908 ADD2P35612 726 aa22.95■■□□□ 1.26
LMNB1-204ENST00000463908 DYNLL1P63167 89 aaKnown RBP22.95■■□□□ 1.26
LMNB1-204ENST00000463908 CNTNAP1P78357 1384 aa22.95■■□□□ 1.26
LMNB1-204ENST00000463908 FKBP1CQ5VVH2 108 aa22.95■■□□□ 1.26
LMNB1-204ENST00000463908 DOCK2Q92608 1830 aa22.95■■□□□ 1.26
LMNB1-204ENST00000463908 CDCA5Q96FF9 252 aa22.95■■□□□ 1.26
LMNB1-204ENST00000463908 ZNF532Q9HCE3 1301 aa22.95■■□□□ 1.26
LMNB1-204ENST00000463908 AATFQ9NY61 560 aaKnown RBP eCLIP22.95■■□□□ 1.26
LMNB1-204ENST00000463908 WDHD1O75717 1129 aaPredicted RBP22.94■■□□□ 1.26
LMNB1-204ENST00000463908 TMED8Q6PL24 325 aaPredicted RBP22.94■■□□□ 1.26
LMNB1-204ENST00000463908 SKAP1Q86WV1 359 aa22.94■■□□□ 1.26
LMNB1-204ENST00000463908 FAM198AQ9UFP1 575 aa22.94■■□□□ 1.26
LMNB1-204ENST00000463908 CDAN1Q8IWY9 1227 aa22.93■■□□□ 1.26
LMNB1-204ENST00000463908 ZFPM1Q8IX07 1006 aa22.93■■□□□ 1.26
LMNB1-204ENST00000463908 MIGA1Q8NAN2 632 aa22.93■■□□□ 1.26
LMNB1-204ENST00000463908 SH3RF3Q8TEJ3 882 aaPredicted RBP22.93■■□□□ 1.26
LMNB1-204ENST00000463908 TEPSINQ96N21 525 aa22.93■■□□□ 1.26
LMNB1-204ENST00000463908 IDI2Q9BXS1 227 aa22.93■■□□□ 1.26
LMNB1-204ENST00000463908 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.93■■□□□ 1.26
LMNB1-204ENST00000463908 ECM29Q5VYK3 1845 aa22.92■■□□□ 1.26
LMNB1-204ENST00000463908 BAG3O95817 575 aa22.92■■□□□ 1.26
LMNB1-204ENST00000463908 UBE3CQ15386 1083 aa22.92■■□□□ 1.26
LMNB1-204ENST00000463908 FAM83AQ86UY5 434 aa22.92■■□□□ 1.26
LMNB1-204ENST00000463908 RIOK1Q9BRS2 568 aaKnown RBP22.92■■□□□ 1.26
LMNB1-204ENST00000463908 TMEM39BQ9GZU3 492 aa22.92■■□□□ 1.26
LMNB1-204ENST00000463908 DDX4Q9NQI0 724 aaKnown RBP22.92■■□□□ 1.26
LMNB1-204ENST00000463908 TMOD2Q9NZR1 351 aa22.92■■□□□ 1.26
LMNB1-204ENST00000463908 CELF2O95319 508 aaKnown RBP22.91■■□□□ 1.26
LMNB1-204ENST00000463908 TNFAIP1Q13829 316 aa22.91■■□□□ 1.26
LMNB1-204ENST00000463908 NBPF12Q5TAG4 269 aaPredicted RBP22.91■■□□□ 1.26
LMNB1-204ENST00000463908 EVI5LQ96CN4 794 aa22.91■■□□□ 1.26
LMNB1-204ENST00000463908 PPP2R3BQ9Y5P8 575 aa22.91■■□□□ 1.26
LMNB1-204ENST00000463908 MAST2Q6P0Q8 1798 aa22.91■■□□□ 1.26
LMNB1-204ENST00000463908 RFX7Q2KHR2 1363 aa22.9■■□□□ 1.26
LMNB1-204ENST00000463908 RNF113AO15541 343 aaKnown RBP22.9■■□□□ 1.26
LMNB1-204ENST00000463908 TNNI2P48788 182 aa22.9■■□□□ 1.26
LMNB1-204ENST00000463908 RGS3P49796 1198 aa22.9■■□□□ 1.26
LMNB1-204ENST00000463908 TCP10Q12799 353 aa22.9■■□□□ 1.26
LMNB1-204ENST00000463908 FAM151AQ8WW52 585 aa22.9■■□□□ 1.26
LMNB1-204ENST00000463908 ZNF408Q9H9D4 720 aa22.9■■□□□ 1.26
LMNB1-204ENST00000463908 TMEM88BA6NKF7 163 aa22.89■■□□□ 1.25
LMNB1-204ENST00000463908 CAPN15O75808 1086 aa22.89■■□□□ 1.25
LMNB1-204ENST00000463908 ZSCAN25Q6NSZ9 544 aa22.89■■□□□ 1.25
LMNB1-204ENST00000463908 NOL10Q9BSC4 688 aaKnown RBP22.89■■□□□ 1.25
LMNB1-204ENST00000463908 PUS7LQ9H0K6 701 aaKnown RBP22.89■■□□□ 1.25
LMNB1-204ENST00000463908 MAGEB6P1A0A0J9YX57 407 aa22.88■■□□□ 1.25
LMNB1-204ENST00000463908 ENTPD3O75355 529 aa22.88■■□□□ 1.25
LMNB1-204ENST00000463908 NPM3O75607 178 aaKnown RBP22.88■■□□□ 1.25
LMNB1-204ENST00000463908 SH3BP5LQ7L8J4 393 aa22.88■■□□□ 1.25
LMNB1-204ENST00000463908 TEX11Q8IYF3 940 aa22.88■■□□□ 1.25
LMNB1-204ENST00000463908 TNS4Q8IZW8 715 aa22.88■■□□□ 1.25
LMNB1-204ENST00000463908 FSD1Q9BTV5 496 aa22.88■■□□□ 1.25
LMNB1-204ENST00000463908 TRIM6-TRIM34B2RNG4 842 aa22.87■■□□□ 1.25
LMNB1-204ENST00000463908 GSPT1P15170 499 aaKnown RBP22.87■■□□□ 1.25
LMNB1-204ENST00000463908 PLCG2P16885 1265 aa22.87■■□□□ 1.25
LMNB1-204ENST00000463908 PICALMQ13492 652 aa22.87■■□□□ 1.25
LMNB1-204ENST00000463908 TTC22Q5TAA0 569 aa22.87■■□□□ 1.25
LMNB1-204ENST00000463908 TGFBRAP1Q8WUH2 860 aa22.87■■□□□ 1.25
LMNB1-204ENST00000463908 OSBP2Q969R2 916 aa22.87■■□□□ 1.25
LMNB1-204ENST00000463908 ZFYP08048 801 aaPredicted RBP22.86■■□□□ 1.25
LMNB1-204ENST00000463908 MOB2Q70IA6 237 aa22.86■■□□□ 1.25
LMNB1-204ENST00000463908 LCORLQ8N3X6 602 aa22.86■■□□□ 1.25
LMNB1-204ENST00000463908 RILPL2Q969X0 211 aa22.86■■□□□ 1.25
LMNB1-204ENST00000463908 ARMT1Q9H993 441 aa22.86■■□□□ 1.25
LMNB1-204ENST00000463908 CREBZFQ9NS37 354 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms