RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PTPRCP08575 1304 aa9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 MROH5Q6ZUA9 1318 aa9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 RPAP1Q9BWH6 1393 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 DOCK3Q8IZD9 2030 aa9.96□□□□□ -0.81
CDC42BPA-210ENST00000462553 CACNB3P54284 484 aa9.96□□□□□ -0.82
CDC42BPA-210ENST00000462553 SP3Q02447 781 aa9.96□□□□□ -0.82
CDC42BPA-210ENST00000462553 INTS3Q68E01 1043 aaKnown RBP9.96□□□□□ -0.82
CDC42BPA-210ENST00000462553 OTUD7BQ6GQQ9 843 aa9.96□□□□□ -0.82
CDC42BPA-210ENST00000462553 FAM43AQ8N2R8 423 aa9.96□□□□□ -0.82
CDC42BPA-210ENST00000462553 EFCC1Q9HA90 598 aa9.96□□□□□ -0.82
CDC42BPA-210ENST00000462553 SNCAIPQ9Y6H5 919 aa9.96□□□□□ -0.82
CDC42BPA-210ENST00000462553 DOCK1Q14185 1865 aa9.96□□□□□ -0.82
CDC42BPA-210ENST00000462553 CCL15-CCL14A0A0B4J2E2 113 aa9.95□□□□□ -0.82
CDC42BPA-210ENST00000462553 SPDYE5A6NIY4 337 aa9.95□□□□□ -0.82
CDC42BPA-210ENST00000462553 HDLBPQ00341 1268 aaKnown RBP9.95□□□□□ -0.82
CDC42BPA-210ENST00000462553 CHAF1AQ13111 956 aaPredicted RBP9.95□□□□□ -0.82
CDC42BPA-210ENST00000462553 CCL15Q16663 113 aa9.95□□□□□ -0.82
CDC42BPA-210ENST00000462553 KLHDC4Q8TBB5 520 aa9.95□□□□□ -0.82
CDC42BPA-210ENST00000462553 ZNF333Q96JL9 665 aa9.95□□□□□ -0.82
CDC42BPA-210ENST00000462553 COL6A3P12111 3177 aa9.95□□□□□ -0.82
CDC42BPA-210ENST00000462553 ATAD5Q96QE3 1844 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 KIF16BQ96L93 1317 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 EN2P19622 333 aaPredicted RBP9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 FGFR2P21802 821 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 GTF2A2P52657 109 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 MAP3K9P80192 1104 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 TAF1CQ15572 869 aaPredicted RBP9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 APOBEC3HQ6NTF7 200 aaKnown RBP9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 TEKT1Q969V4 418 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 ZDHHC15Q96MV8 337 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 ARHGAP39Q9C0H5 1083 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 NOB1Q9ULX3 412 aaKnown RBP9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 PTCH2Q9Y6C5 1203 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 ALPK3Q96L96 1907 aa9.94□□□□□ -0.82
CDC42BPA-210ENST00000462553 PDE8BO95263 885 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 RFX5P48382 616 aaPredicted RBP9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 TNNI2P48788 182 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 BCAMP50895 628 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 METTL24Q5JXM2 366 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 FAM83AQ86UY5 434 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 TBC1D22AQ8WUA7 517 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 WRNIP1Q96S55 665 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 TNNQ9UQP3 1299 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 CSADQ9Y600 493 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 CDK5RAP2Q96SN8 1893 aa9.93□□□□□ -0.82
CDC42BPA-210ENST00000462553 ADGRA2Q96PE1 1338 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 BTBD19C9JJ37 291 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 IRF6O14896 467 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 BCAR3O75815 825 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 HABP4Q5JVS0 413 aaKnown RBP9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 FKBP1CQ5VVH2 108 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 VPS37DQ86XT2 251 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 ZKSCAN4Q969J2 545 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 GCC1Q96CN9 775 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 USP44Q9H0E7 712 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 ZFYVE28Q9HCC9 887 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 ZCCHC17Q9NP64 241 aaKnown RBP9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 LAMA2P24043 3122 aaKnown RBP9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 A0A0C4DFX4 3053 aa9.92□□□□□ -0.82
CDC42BPA-210ENST00000462553 LOC285556D6RIA3 1793 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 RFX7Q2KHR2 1363 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 ATRNL1Q5VV63 1379 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 MAST3O60307 1309 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 TLR2O60603 784 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 CTGFP29279 349 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 LACTBP83111 547 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 PPIL2Q13356 520 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 MOGSQ13724 837 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 PUM3Q15397 648 aaKnown RBP9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 SLC9C1Q4G0N8 1177 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 CAVIN4Q5BKX8 364 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 HHIPL2Q6UWX4 724 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 ERO1BQ86YB8 467 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 MRIQ9BWK5 157 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 SUGT1Q9Y2Z0 365 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 DNAH12Q6ZR08 3092 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 SIPA1L1O43166 1804 aa9.91□□□□□ -0.82
CDC42BPA-210ENST00000462553 MYO5AQ9Y4I1 1855 aaKnown RBP9.9□□□□□ -0.82
CDC42BPA-210ENST00000462553 CETPP11597 493 aa9.9□□□□□ -0.82
CDC42BPA-210ENST00000462553 INPP5BP32019 993 aa9.9□□□□□ -0.82
CDC42BPA-210ENST00000462553 ATG9AQ7Z3C6 839 aa9.9□□□□□ -0.82
CDC42BPA-210ENST00000462553 ARHGAP45Q92619 1136 aa9.9□□□□□ -0.82
CDC42BPA-210ENST00000462553 API5Q9BZZ5 524 aaKnown RBP9.9□□□□□ -0.82
CDC42BPA-210ENST00000462553 DAGLAQ9Y4D2 1042 aa9.9□□□□□ -0.82
CDC42BPA-210ENST00000462553 FOCADQ5VW36 1801 aa9.9□□□□□ -0.82
CDC42BPA-210ENST00000462553 EYA2O00167 538 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 FRAT2O75474 233 aaPredicted RBP9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 IFIT1P09914 478 aaKnown RBP9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 TRIM27P14373 513 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 PRDX5P30044 214 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 FXR1P51114 621 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 PPATQ06203 517 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 NFIAQ12857 509 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 SNAPC2Q13487 334 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 DIXDC1Q155Q3 683 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 C17orf99Q6UX52 265 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 MIGA2Q7L4E1 593 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 SH3TC2Q8TF17 1288 aa9.89□□□□□ -0.83
CDC42BPA-210ENST00000462553 SHISA4Q96DD7 197 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms