RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 APOBEC3HQ6NTF7 200 aaKnown RBP12.87□□□□□ -0.35
FN1-214ENST00000460217 ZNF589Q86UQ0 364 aaPredicted RBP12.87□□□□□ -0.35
FN1-214ENST00000460217 AIDAQ96BJ3 306 aa12.87□□□□□ -0.35
FN1-214ENST00000460217 STRBPQ96SI9 672 aaKnown RBP12.87□□□□□ -0.35
FN1-214ENST00000460217 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
FN1-214ENST00000460217 GPRC5DQ9NZD1 345 aa12.87□□□□□ -0.35
FN1-214ENST00000460217 RPAP1Q9BWH6 1393 aaPredicted RBP12.86□□□□□ -0.35
FN1-214ENST00000460217 WDR90Q96KV7 1748 aa12.86□□□□□ -0.35
FN1-214ENST00000460217 DDNO94850 711 aaPredicted RBP12.86□□□□□ -0.35
FN1-214ENST00000460217 REC8O95072 547 aa12.86□□□□□ -0.35
FN1-214ENST00000460217 MBD4O95243 580 aa12.86□□□□□ -0.35
FN1-214ENST00000460217 GNAT2P19087 354 aa12.86□□□□□ -0.35
FN1-214ENST00000460217 BTDP43251 543 aa12.86□□□□□ -0.35
FN1-214ENST00000460217 CFAP100Q494V2 611 aa12.86□□□□□ -0.35
FN1-214ENST00000460217 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
FN1-214ENST00000460217 MIGA1Q8NAN2 632 aa12.86□□□□□ -0.35
FN1-214ENST00000460217 ZBED3Q96IU2 234 aaPredicted RBP12.86□□□□□ -0.35
FN1-214ENST00000460217 NOL10Q9BSC4 688 aaKnown RBP12.86□□□□□ -0.35
FN1-214ENST00000460217 BACH2Q9BYV9 841 aa12.86□□□□□ -0.35
FN1-214ENST00000460217 AATFQ9NY61 560 aaKnown RBP eCLIP12.86□□□□□ -0.35
FN1-214ENST00000460217 CNOT7Q9UIV1 285 aaKnown RBP12.86□□□□□ -0.35
FN1-214ENST00000460217 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
FN1-214ENST00000460217 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
FN1-214ENST00000460217 RHBDL3P58872 404 aa12.85□□□□□ -0.35
FN1-214ENST00000460217 LCORLQ8N3X6 602 aa12.85□□□□□ -0.35
FN1-214ENST00000460217 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
FN1-214ENST00000460217 H7C1D1 291 aa12.84□□□□□ -0.35
FN1-214ENST00000460217 LMOD1P29536 600 aaPredicted RBP12.84□□□□□ -0.35
FN1-214ENST00000460217 DLGAP5Q15398 846 aa12.84□□□□□ -0.35
FN1-214ENST00000460217 CCDC129Q6ZRS4 1044 aa12.84□□□□□ -0.35
FN1-214ENST00000460217 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
FN1-214ENST00000460217 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
FN1-214ENST00000460217 DSCC1Q9BVC3 393 aa12.84□□□□□ -0.35
FN1-214ENST00000460217 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
FN1-214ENST00000460217 LSG1Q9H089 658 aaKnown RBP12.84□□□□□ -0.35
FN1-214ENST00000460217 ARMT1Q9H993 441 aa12.84□□□□□ -0.35
FN1-214ENST00000460217 ZMYM6O95789 1325 aa12.84□□□□□ -0.35
FN1-214ENST00000460217 BAZ2AQ9UIF9 1905 aaKnown RBP12.84□□□□□ -0.35
FN1-214ENST00000460217 DDX60LQ5H9U9 1706 aaKnown RBP12.83□□□□□ -0.36
FN1-214ENST00000460217 SHTN1A0MZ66 631 aa12.83□□□□□ -0.36
FN1-214ENST00000460217 PATL2C9JE40 543 aaKnown RBP12.83□□□□□ -0.36
FN1-214ENST00000460217 FOXP2O15409 715 aa12.83□□□□□ -0.36
FN1-214ENST00000460217 HSPD1P10809 573 aaKnown RBP12.83□□□□□ -0.36
FN1-214ENST00000460217 RBM5P52756 815 aaKnown RBP eCLIP12.83□□□□□ -0.364e-19■■□□□ 14.5
FN1-214ENST00000460217 DYNLL1P63167 89 aaKnown RBP12.83□□□□□ -0.36
FN1-214ENST00000460217 CDC42EP5Q6NZY7 148 aa12.83□□□□□ -0.36
FN1-214ENST00000460217 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
FN1-214ENST00000460217 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
FN1-214ENST00000460217 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.36
FN1-214ENST00000460217 NAV1Q8NEY1 1877 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 MYH1P12882 1939 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 IQCA1LA6NCM1 817 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 GSG1L2A8MUP6 293 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 WNT10BO00744 389 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 MYO1BO43795 1136 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 WDHD1O75717 1129 aaPredicted RBP12.82□□□□□ -0.36
FN1-214ENST00000460217 SEC24BO95487 1268 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 EPS15P42566 896 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 ALX1Q15699 326 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 KIF4BQ2VIQ3 1234 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 VPS53Q5VIR6 699 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 FKBP1CQ5VVH2 108 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 MAP4K1Q92918 833 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 IDI2Q9BXS1 227 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 ADARB2Q9NS39 739 aaKnown RBP12.82□□□□□ -0.36
FN1-214ENST00000460217 ATP8A2Q9NTI2 1148 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 USP40Q9NVE5 1235 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 MKRN1Q9UHC7 482 aaKnown RBP12.82□□□□□ -0.36
FN1-214ENST00000460217 PCDHAC2Q9Y5I4 1007 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 SLC4A4Q9Y6R1 1079 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 LAMA4Q16363 1823 aa12.82□□□□□ -0.36
FN1-214ENST00000460217 POLR2AP24928 1970 aaKnown RBP12.81□□□□□ -0.36
FN1-214ENST00000460217 EGFRP00533 1210 aa12.81□□□□□ -0.36
FN1-214ENST00000460217 PTH1RQ03431 593 aa12.81□□□□□ -0.36
FN1-214ENST00000460217 SAMD7Q7Z3H4 446 aa12.81□□□□□ -0.36
FN1-214ENST00000460217 TEX11Q8IYF3 940 aa12.81□□□□□ -0.36
FN1-214ENST00000460217 USP26Q9BXU7 913 aa12.81□□□□□ -0.36
FN1-214ENST00000460217 NACAP1Q9BZK3 213 aa12.81□□□□□ -0.36
FN1-214ENST00000460217 EPB41L4AQ9HCS5 686 aaPredicted RBP12.81□□□□□ -0.36
FN1-214ENST00000460217 DCP1AQ9NPI6 582 aaPredicted RBP12.81□□□□□ -0.36
FN1-214ENST00000460217 HACL1Q9UJ83 578 aa12.81□□□□□ -0.36
FN1-214ENST00000460217 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
FN1-214ENST00000460217 COL2A1P02458 1487 aaPredicted RBP12.8□□□□□ -0.36
FN1-214ENST00000460217 LAMB1P07942 1786 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 PRKAB2O43741 272 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 NBPF9Q3BBW0 867 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 TBC1D10BQ4KMP7 808 aaPredicted RBP12.8□□□□□ -0.36
FN1-214ENST00000460217 IFNL3Q8IZI9 196 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 TRPM4Q8TD43 1214 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 SDR42E1Q8WUS8 393 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 TDRD3Q9H7E2 651 aaKnown RBP12.8□□□□□ -0.36
FN1-214ENST00000460217 TMOD2Q9NZR1 351 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 ZNF70Q9UC06 446 aaPredicted RBP12.8□□□□□ -0.36
FN1-214ENST00000460217 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 FLT1P17948 1338 aa12.8□□□□□ -0.36
FN1-214ENST00000460217 POTECB2RU33 542 aa12.79□□□□□ -0.36
FN1-214ENST00000460217 FGAP02671 866 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms