RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ABCC4O15439 1325 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 UBN2Q6ZU65 1347 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 SHTN1A0MZ66 631 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 HTATSF1O43719 755 aaKnown RBP2.85□□□□□ -1.95
NEDD1-204ENST00000457368 DXOO77932 396 aaKnown RBP2.85□□□□□ -1.95
NEDD1-204ENST00000457368 BMP8BP34820 402 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 RPIAP49247 311 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 PRMT2P55345 433 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 NEUROD1Q13562 356 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 ARHGEF6Q15052 776 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 DPP8Q6V1X1 898 aaPredicted RBP2.85□□□□□ -1.95
NEDD1-204ENST00000457368 R3HDMLQ9H3Y0 253 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 TRIM17Q9Y577 477 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 SSC5DA1L4H1 1573 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 PSMD14O00487 310 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 RAD17O75943 681 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 EGFRP00533 1210 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 ZBTB48P10074 688 aaPredicted RBP2.85□□□□□ -1.95
NEDD1-204ENST00000457368 GTF2E1P29083 439 aaPredicted RBP2.85□□□□□ -1.95
NEDD1-204ENST00000457368 GRAPQ13588 217 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 QPCTQ16769 361 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 TRIM46Q7Z4K8 759 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 GRAPLQ8TC17 118 aaPredicted RBP2.85□□□□□ -1.95
NEDD1-204ENST00000457368 TRIM47Q96LD4 638 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 NLRP3Q96P20 1036 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 COL25A1Q9BXS0 654 aaPredicted RBP2.85□□□□□ -1.95
NEDD1-204ENST00000457368 PRDM6Q9NQX0 595 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 GGA3Q9NZ52 723 aa2.85□□□□□ -1.95
NEDD1-204ENST00000457368 ZBTB7BO15156 539 aaPredicted RBP2.84□□□□□ -1.95
NEDD1-204ENST00000457368 ZIC2O95409 532 aaPredicted RBP2.84□□□□□ -1.95
NEDD1-204ENST00000457368 GNRH1P01148 92 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 JUNDP17535 347 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 TBC1D10BQ4KMP7 808 aaPredicted RBP2.84□□□□□ -1.95
NEDD1-204ENST00000457368 LCE2CQ5TA81 110 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 SUSD4Q5VX71 490 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 DLK2Q6UY11 383 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 PPP1R42Q7Z4L9 355 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 ZCCHC17Q9NP64 241 aaKnown RBP2.84□□□□□ -1.95
NEDD1-204ENST00000457368 COL3A1P02461 1466 aaPredicted RBP2.84□□□□□ -1.95
NEDD1-204ENST00000457368 TRIOBPQ9H2D6 2365 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 BTBD11A6QL63 1104 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 KCNQ3O43525 872 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 RELBQ01201 579 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 MTMR2Q13614 643 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 SCARF1Q14162 830 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 CTC1Q2NKJ3 1217 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 LRIT3Q3SXY7 679 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 FAM109BQ6ICB4 259 aaPredicted RBP2.84□□□□□ -1.95
NEDD1-204ENST00000457368 NBPF11Q86T75 865 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 MORC1Q86VD1 984 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 SPIRE2Q8WWL2 714 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 EYA3Q99504 573 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 EFCC1Q9HA90 598 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 NR2E3Q9Y5X4 410 aa2.84□□□□□ -1.95
NEDD1-204ENST00000457368 DDX60Q8IY21 1712 aaKnown RBP2.84□□□□□ -1.96
NEDD1-204ENST00000457368 ZNF646O15015 1829 aaPredicted RBP2.84□□□□□ -1.96
NEDD1-204ENST00000457368 ZMYND10O75800 440 aa2.84□□□□□ -1.96
NEDD1-204ENST00000457368 SF3B3Q15393 1217 aaKnown RBP2.84□□□□□ -1.96
NEDD1-204ENST00000457368 MSS51Q4VC12 460 aa2.84□□□□□ -1.96
NEDD1-204ENST00000457368 ANGEL2Q5VTE6 544 aaKnown RBP2.84□□□□□ -1.96
NEDD1-204ENST00000457368 RSBN1LQ6PCB5 846 aaPredicted RBP2.84□□□□□ -1.96
NEDD1-204ENST00000457368 ARMC9Q7Z3E5 817 aa2.84□□□□□ -1.96
NEDD1-204ENST00000457368 LRP10Q7Z4F1 713 aa2.84□□□□□ -1.96
NEDD1-204ENST00000457368 SHISA4Q96DD7 197 aa2.84□□□□□ -1.96
NEDD1-204ENST00000457368 ZBED3Q96IU2 234 aaPredicted RBP2.84□□□□□ -1.96
NEDD1-204ENST00000457368 HTATIP2Q9BUP3 242 aa2.84□□□□□ -1.96
NEDD1-204ENST00000457368 CUL9Q8IWT3 2517 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 UBE2Q2LH0YL09 131 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 DIAPH1O60610 1272 aaKnown RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 MMP16P51512 607 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 SP3Q02447 781 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 TCIRG1Q13488 830 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 SLC51AQ86UW1 340 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 ZNF511Q8NB15 262 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 UTP14AQ9BVJ6 771 aaKnown RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 TBC1D2Q9BYX2 928 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 SENP2Q9HC62 589 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 MTMR10Q9NXD2 777 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 NXF1Q9UBU9 619 aaKnown RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 ZNF330Q9Y3S2 320 aaPredicted RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 PPP2R3BQ9Y5P8 575 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 ANKRD36CQ5JPF3 1778 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 KIAA0100Q14667 2235 aaKnown RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 CFAP99D6REC4 459 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 IGF2BP3O00425 579 aaKnown RBP eCLIP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 SOX1O00570 391 aaPredicted RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 ECE2O60344 883 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 UPP2O95045 317 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 ADH1CP00326 375 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 NF2P35240 595 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 INSM1Q01101 510 aaPredicted RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 PTPN12Q05209 780 aaKnown RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 CBLBQ13191 982 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 WASHC4Q2M389 1173 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 HSP90AB3PQ58FF7 597 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 OTUD7BQ6GQQ9 843 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 MRPL14Q6P1L8 145 aaKnown RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 KIF6Q6ZMV9 814 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 PNISRQ8TF01 805 aaKnown RBP2.83□□□□□ -1.96
NEDD1-204ENST00000457368 WNK4Q96J92 1243 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms