RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 TDRD7Q8NHU6 1098 aaKnown RBP15.7■□□□□ 0.1
TOP3B-213ENST00000457179 LRP2BPQ9P2M1 347 aa15.7■□□□□ 0.1
TOP3B-213ENST00000457179 CCDC152Q4G0S7 254 aa15.7■□□□□ 0.1
TOP3B-213ENST00000457179 TBC1D9BQ66K14 1250 aa15.7■□□□□ 0.1
TOP3B-213ENST00000457179 TMCO3Q6UWJ1 677 aa15.7■□□□□ 0.1
TOP3B-213ENST00000457179 NBPF5PQ86XG9 351 aaPredicted RBP15.7■□□□□ 0.1
TOP3B-213ENST00000457179 CCAR2Q8N163 923 aaKnown RBP15.7■□□□□ 0.1
TOP3B-213ENST00000457179 CCDC82Q8N4S0 544 aa15.7■□□□□ 0.1
TOP3B-213ENST00000457179 MAGEB6Q8N7X4 407 aa15.7■□□□□ 0.1
TOP3B-213ENST00000457179 THRAP3Q9Y2W1 955 aaKnown RBP15.7■□□□□ 0.1
TOP3B-213ENST00000457179 PARP4Q9UKK3 1724 aaKnown RBP15.69■□□□□ 0.1
TOP3B-213ENST00000457179 MYO1CO00159 1063 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 H2AFXP16104 143 aaPredicted RBP15.69■□□□□ 0.1
TOP3B-213ENST00000457179 HSPA1LP34931 641 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 SNW1Q13573 536 aaKnown RBP15.69■□□□□ 0.1
TOP3B-213ENST00000457179 ZMYM1Q5SVZ6 1142 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 TEX2Q8IWB9 1127 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 TXLNBQ8N3L3 684 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 CCDC34Q96HJ3 373 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 E7EWF7 191 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 NR1I2O75469 434 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 AIDAQ96BJ3 306 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 ZNF532Q9HCE3 1301 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 ERVV-1B6SEH8 477 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 TPM4P67936 248 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 KRT32Q14532 448 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 ZSCAN26Q16670 478 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 TFCP2L1Q9NZI6 479 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 DISP2A7MBM2 1401 aa15.69■□□□□ 0.1
TOP3B-213ENST00000457179 ADAMTS7Q9UKP4 1686 aa15.68■□□□□ 0.1
TOP3B-213ENST00000457179 DHX16O60231 1041 aaKnown RBP15.68■□□□□ 0.1
TOP3B-213ENST00000457179 RASGRF1Q13972 1273 aa15.68■□□□□ 0.1
TOP3B-213ENST00000457179 OTUD7BQ6GQQ9 843 aa15.68■□□□□ 0.1
TOP3B-213ENST00000457179 RALYLQ86SE5 291 aaKnown RBP15.68■□□□□ 0.1
TOP3B-213ENST00000457179 ZNF652Q9Y2D9 606 aa15.68■□□□□ 0.1
TOP3B-213ENST00000457179 ARFGEF2Q9Y6D5 1785 aa15.68■□□□□ 0.1
TOP3B-213ENST00000457179 BECN2A8MW95 431 aa15.68■□□□□ 0.1
TOP3B-213ENST00000457179 FAM193AP78312 1265 aa15.68■□□□□ 0.1
TOP3B-213ENST00000457179 CHRNDQ07001 517 aa15.68■□□□□ 0.1
TOP3B-213ENST00000457179 PUM3Q15397 648 aaKnown RBP15.68■□□□□ 0.1
TOP3B-213ENST00000457179 LEO1Q8WVC0 666 aaPredicted RBP15.68■□□□□ 0.1
TOP3B-213ENST00000457179 SETDB2Q96T68 719 aa15.68■□□□□ 0.1
TOP3B-213ENST00000457179 LOC102724159A0A0B4J2E5 919 aa15.67■□□□□ 0.1
TOP3B-213ENST00000457179 PWP2Q15269 919 aaKnown RBP15.67■□□□□ 0.1
TOP3B-213ENST00000457179 CELF1Q92879 486 aaKnown RBP15.67■□□□□ 0.1
TOP3B-213ENST00000457179 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
TOP3B-213ENST00000457179 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.67■□□□□ 0.12e-9■■■■□ 23.1
TOP3B-213ENST00000457179 ARMT1Q9H993 441 aa15.67■□□□□ 0.1
TOP3B-213ENST00000457179 EFCC1Q9HA90 598 aa15.67■□□□□ 0.1
TOP3B-213ENST00000457179 ZNF213O14771 459 aa15.67■□□□□ 0.1
TOP3B-213ENST00000457179 SLC5A1P13866 664 aa15.67■□□□□ 0.1
TOP3B-213ENST00000457179 IMMTQ16891 758 aaKnown RBP15.67■□□□□ 0.1
TOP3B-213ENST00000457179 ERCC4Q92889 916 aaPredicted RBP15.67■□□□□ 0.1
TOP3B-213ENST00000457179 GJB4Q9NTQ9 266 aa15.67■□□□□ 0.1
TOP3B-213ENST00000457179 RAI14Q9P0K7 980 aa15.67■□□□□ 0.1
TOP3B-213ENST00000457179 PRKAB2O43741 272 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 CCZ1BP86790 482 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 CCZ1P86791 482 aaPredicted RBP15.66■□□□□ 0.1
TOP3B-213ENST00000457179 C11orf57Q6ZUT1 292 aaPredicted RBP15.66■□□□□ 0.1
TOP3B-213ENST00000457179 HOMER1Q86YM7 354 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 ZKSCAN3Q9BRR0 538 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 EPC1Q9H2F5 836 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 GPR108Q9NPR9 543 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 OAS2P29728 719 aaKnown RBP15.66■□□□□ 0.1
TOP3B-213ENST00000457179 SPATA5Q8NB90 893 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 LPIN2Q92539 896 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 UBXN4Q92575 508 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 HELLSQ9NRZ9 838 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 ARGLU1Q9NWB6 273 aaPredicted RBP15.66■□□□□ 0.1
TOP3B-213ENST00000457179 TOGARAM1Q9Y4F4 1720 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 RFC4P35249 363 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 GPS2Q13227 327 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 DHX32Q7L7V1 743 aaKnown RBP15.66■□□□□ 0.1
TOP3B-213ENST00000457179 PGBD1Q96JS3 809 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 MYL10Q9BUA6 226 aa15.66■□□□□ 0.1
TOP3B-213ENST00000457179 RTCBQ9Y3I0 505 aaKnown RBP15.66■□□□□ 0.1
TOP3B-213ENST00000457179 PTPDC1A2A3K4 754 aa15.65■□□□□ 0.1
TOP3B-213ENST00000457179 LMAN1P49257 510 aa15.65■□□□□ 0.1
TOP3B-213ENST00000457179 GPR101Q96P66 508 aaPredicted RBP15.65■□□□□ 0.1
TOP3B-213ENST00000457179 CLSTN2Q9H4D0 955 aa15.65■□□□□ 0.1
TOP3B-213ENST00000457179 DDX19AQ9NUU7 478 aaKnown RBP15.65■□□□□ 0.1
TOP3B-213ENST00000457179 MINDY4BA8MYZ0 360 aa15.65■□□□□ 0.1
TOP3B-213ENST00000457179 MBD4O95243 580 aa15.65■□□□□ 0.1
TOP3B-213ENST00000457179 KLRK1P26718 216 aa15.65■□□□□ 0.1
TOP3B-213ENST00000457179 NOP2P46087 812 aaKnown RBP15.65■□□□□ 0.1
TOP3B-213ENST00000457179 FAM196AQ6ZSG2 479 aa15.65■□□□□ 0.1
TOP3B-213ENST00000457179 ANKRD18AQ8IVF6 992 aa15.65■□□□□ 0.1
TOP3B-213ENST00000457179 APPBP2Q92624 585 aa15.65■□□□□ 0.1
TOP3B-213ENST00000457179 NTSR2O95665 410 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 PDE6AP16499 860 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 CASQ1P31415 396 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 PLA2G12BQ9BX93 195 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 SCAND2PQ9GZW5 306 aaPredicted RBP15.64■□□□□ 0.09
TOP3B-213ENST00000457179 SMIM22K7EJ46 135 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 NEMFO60524 1076 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 CTDSPL2Q05D32 466 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 TRDNQ13061 729 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 BARGINQ6ZT62 677 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 MNS1Q8NEH6 495 aa15.64■□□□□ 0.09
TOP3B-213ENST00000457179 NKX2-3Q8TAU0 364 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms