RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 IGDCC4Q8TDY8 1250 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 TMEM87BQ96K49 555 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 EPB41L4AQ9HCS5 686 aaPredicted RBP21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 POLR3EQ9NVU0 708 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 CLIC4Q9Y696 253 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 NEDD4P46934 1319 aa21.42■■□□□ 1.02
SEMA3B-209ENST00000456560 B4E1Z4 1266 aa21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 YEATS4O95619 227 aa21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 ZNF75DP51815 510 aa21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 MYSM1Q5VVJ2 828 aa21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 FMR1NBQ8N0W7 255 aaPredicted RBP21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 LAMB2P55268 1798 aa21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 KIF28PB7ZC32 967 aa21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 KINO60870 393 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 KIF23Q02241 960 aaPredicted RBP21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 MRPS27Q92552 414 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 SENP2Q9HC62 589 aa21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 GJB4Q9NTQ9 266 aa21.41■■□□□ 1.02
SEMA3B-209ENST00000456560 MBD4O95243 580 aa21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 POLR3DP05423 398 aaPredicted RBP21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 METAP2P50579 478 aaKnown RBP eCLIP21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 STX1AQ16623 288 aa21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 APOA5Q6Q788 366 aa21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 KIAA1524Q8TCG1 905 aa21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 C11orf57Q6ZUT1 292 aaPredicted RBP21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 SGMS1Q86VZ5 419 aa21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 KCNG4Q8TDN1 519 aa21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 NIP7Q9Y221 180 aaKnown RBP eCLIP21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 TACC3Q9Y6A5 838 aa21.4■■□□□ 1.02
SEMA3B-209ENST00000456560 IGHMBP2P38935 993 aaKnown RBP21.39■■□□□ 1.01
SEMA3B-209ENST00000456560 STK38Q15208 465 aa21.39■■□□□ 1.01
SEMA3B-209ENST00000456560 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.39■■□□□ 1.01
SEMA3B-209ENST00000456560 C17orf53Q8N3J3 647 aaPredicted RBP21.39■■□□□ 1.01
SEMA3B-209ENST00000456560 LY9Q9HBG7 655 aa21.39■■□□□ 1.01
SEMA3B-209ENST00000456560 GSG1L2A8MUP6 293 aa21.39■■□□□ 1.01
SEMA3B-209ENST00000456560 CDKL5O76039 1030 aa21.39■■□□□ 1.01
SEMA3B-209ENST00000456560 BCAMP50895 628 aa21.39■■□□□ 1.01
SEMA3B-209ENST00000456560 ARMT1Q9H993 441 aa21.39■■□□□ 1.01
SEMA3B-209ENST00000456560 TIAM2Q8IVF5 1701 aa21.38■■□□□ 1.01
SEMA3B-209ENST00000456560 CDC27P30260 824 aa21.38■■□□□ 1.01
SEMA3B-209ENST00000456560 MYRIPQ8NFW9 859 aa21.38■■□□□ 1.01
SEMA3B-209ENST00000456560 GJD4Q96KN9 370 aaPredicted RBP21.38■■□□□ 1.01
SEMA3B-209ENST00000456560 INCENPQ9NQS7 918 aa21.38■■□□□ 1.01
SEMA3B-209ENST00000456560 PYCARDQ9ULZ3 195 aa21.38■■□□□ 1.01
SEMA3B-209ENST00000456560 SPTLC2O15270 562 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 NTRK3Q16288 839 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 ARID3AQ99856 593 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 TRIM5Q9C035 493 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 NAPBQ9H115 298 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 FAM217BQ9NTX9 383 aaPredicted RBP21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 PNPLA7Q6ZV29 1317 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 LIFRP42702 1097 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 CTDSPL2Q05D32 466 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 FAM182BQ5T319 152 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 ANO1Q5XXA6 986 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 AIFM3Q96NN9 605 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 ALG1Q9BT22 464 aa21.37■■□□□ 1.01
SEMA3B-209ENST00000456560 A0A1B0GVL5 298 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 ZBTB43O43298 467 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 CHRNDQ07001 517 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 SARM1Q6SZW1 724 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 BCORQ6W2J9 1755 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 RXRAP19793 462 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 PTGS1P23219 599 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 NDUFA8P51970 172 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 SF3A1Q15459 793 aaKnown RBP21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 TMEM67Q5HYA8 995 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 SYNE3Q6ZMZ3 975 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 QTRT2Q9H974 415 aaKnown RBP21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 ANO10Q9NW15 660 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 ZSWIM5Q9P217 1185 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 CHD4Q14839 1912 aa21.36■■□□□ 1.01
SEMA3B-209ENST00000456560 COL4A1P02462 1669 aa21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 PRKAB2O43741 272 aa21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 GNAT2P19087 354 aa21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 CDC25BP30305 580 aa21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 AXDND1Q5T1B0 1012 aaPredicted RBP21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 AKNAD1Q5T1N1 836 aa21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 KRT40Q6A162 431 aa21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 CPLX2Q6PUV4 134 aaKnown RBP21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 LCORLQ8N3X6 602 aa21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 SMARCC1Q92922 1105 aaPredicted RBP21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 PRIMPOLQ96LW4 560 aa21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 CNNM2Q9H8M5 875 aa21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 TRPC5Q9UL62 973 aaPredicted RBP21.35■■□□□ 1.01
SEMA3B-209ENST00000456560 CCDC186Q7Z3E2 898 aa21.34■■□□□ 1.01
SEMA3B-209ENST00000456560 MICU3Q86XE3 530 aa21.34■■□□□ 1.01
SEMA3B-209ENST00000456560 KRT23Q9C075 422 aa21.34■■□□□ 1.01
SEMA3B-209ENST00000456560 COL5A3P25940 1745 aaPredicted RBP21.34■■□□□ 1.01
SEMA3B-209ENST00000456560 ECM29Q5VYK3 1845 aa21.34■■□□□ 1.01
SEMA3B-209ENST00000456560 GOLGA8AA7E2F4 631 aa21.33■■□□□ 1.01
SEMA3B-209ENST00000456560 RANBP6O60518 1105 aaKnown RBP21.33■■□□□ 1.01
SEMA3B-209ENST00000456560 NID2Q14112 1375 aa21.33■■□□□ 1.01
SEMA3B-209ENST00000456560 SLC39A14Q15043 492 aa21.33■■□□□ 1.01
SEMA3B-209ENST00000456560 CLEC4GQ6UXB4 293 aa21.33■■□□□ 1.01
SEMA3B-209ENST00000456560 NFXL1Q6ZNB6 911 aa21.33■■□□□ 1.01
SEMA3B-209ENST00000456560 DHX40Q8IX18 779 aaKnown RBP21.33■■□□□ 1.01
SEMA3B-209ENST00000456560 STAG1Q8WVM7 1258 aa21.33■■□□□ 1.01
SEMA3B-209ENST00000456560 PHKBQ93100 1093 aa21.33■■□□□ 1.01
SEMA3B-209ENST00000456560 GOLGA6L19H0YKK7 550 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms