RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 CCDC186Q7Z3E2 898 aa23.36■■□□□ 1.33
CSPG5-203ENST00000456150 MAP7D2Q96T17 732 aa23.36■■□□□ 1.33
CSPG5-203ENST00000456150 WWC3Q9ULE0 1092 aa23.36■■□□□ 1.33
CSPG5-203ENST00000456150 CHD4Q14839 1912 aa23.36■■□□□ 1.33
CSPG5-203ENST00000456150 POLR3DP05423 398 aaPredicted RBP23.36■■□□□ 1.33
CSPG5-203ENST00000456150 STRBPQ96SI9 672 aaKnown RBP23.36■■□□□ 1.33
CSPG5-203ENST00000456150 CLIC4Q9Y696 253 aa23.36■■□□□ 1.33
CSPG5-203ENST00000456150 SPTLC2O15270 562 aa23.35■■□□□ 1.33
CSPG5-203ENST00000456150 EIF5P55010 431 aaKnown RBP23.35■■□□□ 1.33
CSPG5-203ENST00000456150 KIF23Q02241 960 aaPredicted RBP23.35■■□□□ 1.33
CSPG5-203ENST00000456150 MAP3K12Q12852 859 aa23.35■■□□□ 1.33
CSPG5-203ENST00000456150 CYB5R4Q7L1T6 521 aa23.35■■□□□ 1.33
CSPG5-203ENST00000456150 CEP57L1Q8IYX8 460 aa23.35■■□□□ 1.33
CSPG5-203ENST00000456150 SPATA5Q8NB90 893 aa23.35■■□□□ 1.33
CSPG5-203ENST00000456150 NAT10Q9H0A0 1025 aaKnown RBP23.35■■□□□ 1.33
CSPG5-203ENST00000456150 CLIP2Q9UDT6 1046 aa23.35■■□□□ 1.33
CSPG5-203ENST00000456150 BECN2A8MW95 431 aa23.34■■□□□ 1.33
CSPG5-203ENST00000456150 RAB11FIP4Q86YS3 637 aa23.34■■□□□ 1.33
CSPG5-203ENST00000456150 MPHOSPH8Q99549 860 aa23.34■■□□□ 1.33
CSPG5-203ENST00000456150 KCNQ4P56696 695 aa23.34■■□□□ 1.33
CSPG5-203ENST00000456150 SDF4Q9BRK5 362 aa23.34■■□□□ 1.33
CSPG5-203ENST00000456150 APOA5Q6Q788 366 aa23.33■■□□□ 1.33
CSPG5-203ENST00000456150 HELBQ8NG08 1087 aaPredicted RBP23.33■■□□□ 1.33
CSPG5-203ENST00000456150 MRFAP1L1Q96HT8 127 aa23.33■■□□□ 1.33
CSPG5-203ENST00000456150 UTP14AQ9BVJ6 771 aaKnown RBP23.33■■□□□ 1.33
CSPG5-203ENST00000456150 CCDC87Q9NVE4 849 aa23.33■■□□□ 1.33
CSPG5-203ENST00000456150 B4E1Z4 1266 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 PATL2C9JE40 543 aaKnown RBP23.32■■□□□ 1.32
CSPG5-203ENST00000456150 PARP10Q53GL7 1025 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 SUSD4Q5VX71 490 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 ANO1Q5XXA6 986 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 SMARCC1Q92922 1105 aaPredicted RBP23.32■■□□□ 1.32
CSPG5-203ENST00000456150 NHSQ6T4R5 1651 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 A0A1B0GVL5 298 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 CHAF1AQ13111 956 aaPredicted RBP23.32■■□□□ 1.32
CSPG5-203ENST00000456150 INTS5Q6P9B9 1019 aaKnown RBP23.32■■□□□ 1.32
CSPG5-203ENST00000456150 MTERF4Q7Z6M4 381 aaKnown RBP23.32■■□□□ 1.32
CSPG5-203ENST00000456150 ALG1Q9BT22 464 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 FAM13BQ9NYF5 915 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 LAMB2P55268 1798 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 TIAM2Q8IVF5 1701 aa23.32■■□□□ 1.32
CSPG5-203ENST00000456150 BTAF1O14981 1849 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 NDUFA8P51970 172 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 RBM10P98175 930 aaKnown RBP23.31■■□□□ 1.32
CSPG5-203ENST00000456150 SGMS1Q86VZ5 419 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 NAPBQ9H115 298 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 CNNM2Q9H8M5 875 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 RREB1Q92766 1687 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 NEDD4P46934 1319 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 KIF28PB7ZC32 967 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 ZBTB43O43298 467 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 GTF2F1P35269 517 aaKnown RBP eCLIP23.31■■□□□ 1.32
CSPG5-203ENST00000456150 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
CSPG5-203ENST00000456150 RASGRF1Q13972 1273 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 ZRSR1Q15695 479 aaKnown RBP23.31■■□□□ 1.32
CSPG5-203ENST00000456150 CCDC152Q4G0S7 254 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 MAGEB6Q8N7X4 407 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 DENND2AQ9ULE3 1009 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 ECM29Q5VYK3 1845 aa23.31■■□□□ 1.32
CSPG5-203ENST00000456150 NFXL1Q6ZNB6 911 aa23.3■■□□□ 1.32
CSPG5-203ENST00000456150 DHX40Q8IX18 779 aaKnown RBP23.3■■□□□ 1.32
CSPG5-203ENST00000456150 IFNL3Q8IZI9 196 aa23.3■■□□□ 1.32
CSPG5-203ENST00000456150 IGDCC4Q8TDY8 1250 aa23.3■■□□□ 1.32
CSPG5-203ENST00000456150 NRBP1Q9UHY1 535 aa23.3■■□□□ 1.32
CSPG5-203ENST00000456150 RTL9Q8NET4 1388 aa23.3■■□□□ 1.32
CSPG5-203ENST00000456150 MBD4O95243 580 aa23.29■■□□□ 1.32
CSPG5-203ENST00000456150 LIFRP42702 1097 aa23.29■■□□□ 1.32
CSPG5-203ENST00000456150 GNAT2P19087 354 aa23.29■■□□□ 1.32
CSPG5-203ENST00000456150 TMEM67Q5HYA8 995 aa23.29■■□□□ 1.32
CSPG5-203ENST00000456150 MICU3Q86XE3 530 aa23.29■■□□□ 1.32
CSPG5-203ENST00000456150 LY9Q9HBG7 655 aa23.29■■□□□ 1.32
CSPG5-203ENST00000456150 GJB4Q9NTQ9 266 aa23.29■■□□□ 1.32
CSPG5-203ENST00000456150 KIAA1468Q9P260 1216 aa23.29■■□□□ 1.32
CSPG5-203ENST00000456150 CICQ96RK0 1608 aaPredicted RBP23.29■■□□□ 1.32
CSPG5-203ENST00000456150 GOLGA8AA7E2F4 631 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 NEMFO60524 1076 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 CMA1P23946 247 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 IGHMBP2P38935 993 aaKnown RBP23.28■■□□□ 1.32
CSPG5-203ENST00000456150 GLIPR1L2Q4G1C9 344 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 KRT23Q9C075 422 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 EPB41L4AQ9HCS5 686 aaPredicted RBP23.28■■□□□ 1.32
CSPG5-203ENST00000456150 SBF2Q86WG5 1849 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 IARSP41252 1262 aaKnown RBP23.28■■□□□ 1.32
CSPG5-203ENST00000456150 GNL2Q13823 731 aaKnown RBP23.28■■□□□ 1.32
CSPG5-203ENST00000456150 TRIM29Q14134 588 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 SLC39A14Q15043 492 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 KRT40Q6A162 431 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 VPS37DQ86XT2 251 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 JMYQ8N9B5 988 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 BRWD3Q6RI45 1802 aa23.28■■□□□ 1.32
CSPG5-203ENST00000456150 CAMTA2O94983 1202 aa23.27■■□□□ 1.32
CSPG5-203ENST00000456150 CDC27P30260 824 aa23.27■■□□□ 1.32
CSPG5-203ENST00000456150 LINC00116Q8NCU8 138 aa23.27■■□□□ 1.32
CSPG5-203ENST00000456150 BPIFA3Q9BQP9 254 aa23.27■■□□□ 1.32
CSPG5-203ENST00000456150 NACAP1Q9BZK3 213 aa23.27■■□□□ 1.32
CSPG5-203ENST00000456150 MYH14Q7Z406 1995 aaKnown RBP23.27■■□□□ 1.32
CSPG5-203ENST00000456150 STK36Q9NRP7 1315 aa23.27■■□□□ 1.32
CSPG5-203ENST00000456150 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.26■■□□□ 1.31
CSPG5-203ENST00000456150 LRMPQ12912 555 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 AXDND1Q5T1B0 1012 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms