RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SPC25Q9HBM1 224 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 SH2B1Q9NRF2 756 aaPredicted RBP6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 TRIM33Q9UPN9 1127 aa6.02□□□□□ -1.45
HMGN3P1-201ENST00000453847 UPK3BL1B0FP48 263 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 UPK3BL2E5RIL1 263 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 SOX1O00570 391 aaPredicted RBP6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 ST8SIA5O15466 376 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 GRIN3BO60391 1043 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 CPB1P15086 417 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 LARP1BQ659C4 914 aaKnown RBP6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 APPBP2Q92624 585 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 AAASQ9NRG9 546 aa6.01□□□□□ -1.45
HMGN3P1-201ENST00000453847 GPR25O00155 361 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 TRIM37O94972 964 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 EIF2AK2P19525 551 aaKnown RBP6□□□□□ -1.45
HMGN3P1-201ENST00000453847 ITGA6P23229 1130 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 MASP1P48740 699 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 RPL6Q02878 288 aaKnown RBP6□□□□□ -1.45
HMGN3P1-201ENST00000453847 LRRC14Q15048 493 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 FXNQ16595 210 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 C2orf27AQ580R0 203 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 GMCL1Q96IK5 515 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 UBE2OQ9C0C9 1292 aaKnown RBP6□□□□□ -1.45
HMGN3P1-201ENST00000453847 LACRTQ9GZZ8 138 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 CBX8Q9HC52 389 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 KLHL42Q9P2K6 505 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 SAMM50Q9Y512 469 aa6□□□□□ -1.45
HMGN3P1-201ENST00000453847 PRR36Q9H6K5 1346 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 DNAJA2O60884 412 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 SIN3BO75182 1162 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 SMNDC1O75940 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ECEL1O95672 775 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 GHRHP01286 108 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ACRP10323 421 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 IMPDH2P12268 514 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 EPHA1P21709 976 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 IBSPP21815 317 aaPredicted RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 PCBP4P57723 403 aaKnown RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 INPP5AQ14642 412 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ZNF468Q5VIY5 522 aaPredicted RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 TTC6Q86TZ1 520 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 FAM35AQ86V20 835 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 HOMER1Q86YM7 354 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ZCRB1Q8TBF4 217 aaKnown RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 LPIN3Q9BQK8 851 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 SMG9Q9H0W8 520 aaKnown RBP5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 PFDN2Q9UHV9 154 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 ZMYM5Q9UJ78 669 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 SLC6A14Q9UN76 642 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 LTBP3Q9NS15 1303 aa5.99□□□□□ -1.45
HMGN3P1-201ENST00000453847 MEIS3P2A8K0S8 358 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 PTPRAP18433 802 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 LMNB1P20700 586 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 ANAPC15P60006 121 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 TBC1D8BQ0IIM8 1120 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 IFRD2Q12894 506 aaPredicted RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 ZYXQ15942 572 aaKnown RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 PPP2R5EQ16537 467 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 MAP1SQ66K74 1059 aaPredicted RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 C6orf15Q6UXA7 325 aaPredicted RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 C16orf86Q6ZW13 317 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 FAM178BQ8IXR5 827 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 C19orf47Q8N9M1 422 aaKnown RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 THAP3Q8WTV1 239 aaPredicted RBP5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 TNFRSF25Q93038 417 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 NRSN2Q9GZP1 204 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 PRKAB1Q9Y478 270 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 CORINQ9Y5Q5 1042 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 KDM2BQ8NHM5 1336 aa5.98□□□□□ -1.45
HMGN3P1-201ENST00000453847 PARNO95453 639 aaKnown RBP5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 BPNT1O95861 308 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 GSTP1P09211 210 aaKnown RBP5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 NEUROD1Q13562 356 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 GRIK5Q16478 980 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 PLEKHG6Q3KR16 790 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 MTERF2Q49AM1 385 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 DALRD3Q5D0E6 543 aaKnown RBP5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 ARSHQ5FYA8 562 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 SCARA3Q6AZY7 606 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 GPBAR1Q8TDU6 330 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 EMILIN2Q9BXX0 1053 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 PRR12Q9ULL5 1215 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 PTCH2Q9Y6C5 1203 aa5.97□□□□□ -1.45
HMGN3P1-201ENST00000453847 ADARB2-AS1A8MUL3 147 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 TM4SF5O14894 197 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 PPP1R12AO14974 1030 aaPredicted RBP5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 DDAH1O94760 285 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 HTR3BO95264 441 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 CTSBP07858 339 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 VIL1P09327 827 aaKnown RBP5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 FAM153BP0C7A2 387 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 POU3F3P20264 500 aaPredicted RBP5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 BAG6P46379 1132 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 IKBKEQ14164 716 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 PCSK7Q16549 785 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 PKDCCQ504Y2 493 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 LRFN4Q6PJG9 635 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 VWA5B2Q8N398 1253 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 TM9SF2Q99805 663 aa5.96□□□□□ -1.46
HMGN3P1-201ENST00000453847 FAM126AQ9BYI3 521 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms