RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 GPC2Q8N158 579 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 NECAB1Q8N987 351 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 TCEANC2Q96MN5 208 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 RRAGCQ9HB90 399 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 ARAP2Q8WZ64 1704 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 ZNF646O15015 1829 aaPredicted RBP12.7□□□□□ -0.38
PKP4-206ENST00000452162 POTECB2RU33 542 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 PSMD14O00487 310 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 ZNF445P59923 1031 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 FAM84BQ96KN1 310 aaPredicted RBP12.7□□□□□ -0.38
PKP4-206ENST00000452162 PANK2Q9BZ23 570 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 COA1Q9GZY4 146 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 LAMA4Q16363 1823 aa12.7□□□□□ -0.38
PKP4-206ENST00000452162 AKAP11Q9UKA4 1901 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 M0R2C6 588 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 ZSCAN23Q3MJ62 389 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 STOX1Q6ZVD7 989 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 PODNQ7Z5L7 613 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 CD209Q9NNX6 404 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 MYH7P12883 1935 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 MBD3O95983 291 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
PKP4-206ENST00000452162 HSPD1P10809 573 aaKnown RBP12.69□□□□□ -0.38
PKP4-206ENST00000452162 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
PKP4-206ENST00000452162 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 ZNF512BQ96KM6 892 aaPredicted RBP12.69□□□□□ -0.38
PKP4-206ENST00000452162 MTMR6Q9Y217 621 aa12.69□□□□□ -0.38
PKP4-206ENST00000452162 SCN4AP35499 1836 aa12.68□□□□□ -0.38
PKP4-206ENST00000452162 F13A1P00488 732 aa12.68□□□□□ -0.38
PKP4-206ENST00000452162 ZAP70P43403 619 aa12.68□□□□□ -0.38
PKP4-206ENST00000452162 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
PKP4-206ENST00000452162 ZNF804AQ7Z570 1209 aa12.68□□□□□ -0.38
PKP4-206ENST00000452162 LPIN2Q92539 896 aa12.68□□□□□ -0.38
PKP4-206ENST00000452162 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
PKP4-206ENST00000452162 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
PKP4-206ENST00000452162 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
PKP4-206ENST00000452162 HIBADHP31937 336 aaKnown RBP12.67□□□□□ -0.38
PKP4-206ENST00000452162 BCAMP50895 628 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 SCNN1DP51172 638 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 TNIP1Q15025 636 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 FBXO33Q7Z6M2 555 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
PKP4-206ENST00000452162 MYH13Q9UKX3 1938 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 KIF3CO14782 793 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 SLC5A1P13866 664 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 IL1R1P14778 569 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 MCAMP43121 646 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 GMPSP49915 693 aaPredicted RBP12.67□□□□□ -0.38
PKP4-206ENST00000452162 PI16Q6UXB8 463 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 MXD3Q9BW11 206 aa12.67□□□□□ -0.38
PKP4-206ENST00000452162 USP17L3A6NCW0 530 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 USP17L4A6NCW7 530 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 FOXP2O15409 715 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 DTNBO60941 627 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 VIL1P09327 827 aaKnown RBP12.66□□□□□ -0.38
PKP4-206ENST00000452162 USP17L1Q7RTZ2 530 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 IQSEC3Q9UPP2 1182 aaPredicted RBP12.66□□□□□ -0.38
PKP4-206ENST00000452162 JAG2Q9Y219 1238 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 SHTN1A0MZ66 631 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
PKP4-206ENST00000452162 VEGFAP15692 232 aaPredicted RBP12.66□□□□□ -0.38
PKP4-206ENST00000452162 GTF2IP78347 998 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 FOXD4L6Q3SYB3 417 aaPredicted RBP12.66□□□□□ -0.38
PKP4-206ENST00000452162 CAVIN4Q5BKX8 364 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 TTLL5Q6EMB2 1281 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 FOXD4L3Q6VB84 417 aaPredicted RBP12.66□□□□□ -0.38
PKP4-206ENST00000452162 Q6ZUG5 572 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 USP48Q86UV5 1035 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 APPBP2Q92624 585 aa12.66□□□□□ -0.38
PKP4-206ENST00000452162 TCHHQ07283 1943 aa12.65□□□□□ -0.38
PKP4-206ENST00000452162 ARID4AP29374 1257 aaPredicted RBP12.65□□□□□ -0.38
PKP4-206ENST00000452162 EPS15P42566 896 aa12.65□□□□□ -0.38
PKP4-206ENST00000452162 TDRD7Q8NHU6 1098 aaKnown RBP12.65□□□□□ -0.38
PKP4-206ENST00000452162 GTF3C6Q969F1 213 aa12.65□□□□□ -0.38
PKP4-206ENST00000452162 GDPD2Q9HCC8 539 aa12.65□□□□□ -0.38
PKP4-206ENST00000452162 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.38
PKP4-206ENST00000452162 DACT2Q5SW24 774 aa12.65□□□□□ -0.38
PKP4-206ENST00000452162 STRIP1Q5VSL9 837 aa12.65□□□□□ -0.38
PKP4-206ENST00000452162 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
PKP4-206ENST00000452162 DHX32Q7L7V1 743 aaKnown RBP12.65□□□□□ -0.38
PKP4-206ENST00000452162 CNPY2Q9Y2B0 182 aa12.65□□□□□ -0.38
PKP4-206ENST00000452162 ATP6V1DQ9Y5K8 247 aa12.65□□□□□ -0.38
PKP4-206ENST00000452162 E7EWF7 191 aa12.64□□□□□ -0.39
PKP4-206ENST00000452162 GADD45BO75293 160 aaPredicted RBP12.64□□□□□ -0.39
PKP4-206ENST00000452162 EXOSC10Q01780 885 aaKnown RBP12.64□□□□□ -0.39
PKP4-206ENST00000452162 AGXT2Q9BYV1 514 aa12.64□□□□□ -0.39
PKP4-206ENST00000452162 TAF1DQ9H5J8 278 aaPredicted RBP12.64□□□□□ -0.39
PKP4-206ENST00000452162 GPRC5DQ9NZD1 345 aa12.64□□□□□ -0.39
PKP4-206ENST00000452162 HACL1Q9UJ83 578 aa12.64□□□□□ -0.39
PKP4-206ENST00000452162 IQCA1LA6NCM1 817 aa12.64□□□□□ -0.39
PKP4-206ENST00000452162 PHKA1P46020 1223 aa12.64□□□□□ -0.39
PKP4-206ENST00000452162 CCDC102BQ68D86 513 aa12.64□□□□□ -0.39
PKP4-206ENST00000452162 GMLQ99445 158 aa12.64□□□□□ -0.39
PKP4-206ENST00000452162 PUS7LQ9H0K6 701 aaKnown RBP12.64□□□□□ -0.39
PKP4-206ENST00000452162 CNOT7Q9UIV1 285 aaKnown RBP12.64□□□□□ -0.39
PKP4-206ENST00000452162 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms