RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 FUT8Q9BYC5 575 aa15.49■□□□□ 0.07
SYNGAP1-204ENST00000449372 RPS6KA5O75582 802 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 PTH1RQ03431 593 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 LMBR1LQ6UX01 489 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 RPAINQ86UA6 219 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 DNAJC10Q8IXB1 793 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 ANO10Q9NW15 660 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 DTNBO60941 627 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 ATP5JP18859 108 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 LRRFIP1Q32MZ4 808 aaKnown RBP15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 TEX13AQ9BXU3 409 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 MYH3P11055 1940 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 SMC2O95347 1197 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 STX1AQ16623 288 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 FAM43BQ6ZT52 329 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 TADA2BQ86TJ2 420 aa15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
SYNGAP1-204ENST00000449372 SLIT2O94813 1529 aa15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 TCIRG1Q13488 830 aa15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 CEP57L1Q8IYX8 460 aa15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 SGSM3Q96HU1 749 aa15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 ZBTB3Q9H5J0 574 aa15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 ETF1P62495 437 aaKnown RBP15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 NECTIN1Q15223 517 aa15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 SPEF2Q9C093 1822 aa15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 PSDA5PKW4 1024 aaPredicted RBP15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 PPP2R5AQ15172 486 aa15.47■□□□□ 0.07
SYNGAP1-204ENST00000449372 RFX7Q2KHR2 1363 aa15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 SPATA31A1Q5TZJ5 1347 aa15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 CYP19A1P11511 503 aaPredicted RBP15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 MAP2K1Q02750 393 aaPredicted RBP15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 NBPF20Q3BBV1 942 aa15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 GPR161Q8N6U8 529 aaKnown RBP15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 ZNF831Q5JPB2 1677 aa15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 RBM43Q6ZSC3 357 aaKnown RBP15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 PLA2G12BQ9BX93 195 aa15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 RAI14Q9P0K7 980 aa15.46■□□□□ 0.07
SYNGAP1-204ENST00000449372 PPP1R12AO14974 1030 aaPredicted RBP15.46■□□□□ 0.06
SYNGAP1-204ENST00000449372 FAM227BQ96M60 508 aa15.46■□□□□ 0.06
SYNGAP1-204ENST00000449372 LLPHQ9BRT6 129 aaKnown RBP15.46■□□□□ 0.06
SYNGAP1-204ENST00000449372 GPR108Q9NPR9 543 aa15.46■□□□□ 0.06
SYNGAP1-204ENST00000449372 ZNF609O15014 1411 aa15.45■□□□□ 0.06
SYNGAP1-204ENST00000449372 A0A087WUV0 522 aaPredicted RBP15.45■□□□□ 0.06
SYNGAP1-204ENST00000449372 IQCB1Q15051 598 aa15.45■□□□□ 0.06
SYNGAP1-204ENST00000449372 TICAM2Q86XR7 235 aa15.45■□□□□ 0.06
SYNGAP1-204ENST00000449372 MAP4K1Q92918 833 aa15.45■□□□□ 0.06
SYNGAP1-204ENST00000449372 RPS6KB1P23443 525 aa15.45■□□□□ 0.06
SYNGAP1-204ENST00000449372 TRDNQ13061 729 aa15.45■□□□□ 0.06
SYNGAP1-204ENST00000449372 COL5A3P25940 1745 aaPredicted RBP15.45■□□□□ 0.06
SYNGAP1-204ENST00000449372 PHLPP2Q6ZVD8 1323 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 NMIQ13287 307 aaPredicted RBP15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 BOLA2Q9H3K6 86 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 PARD6BQ9BYG5 372 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 LRP5O75197 1615 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 A0A0D9SFI3 127 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 IRF6O14896 467 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 CIAO1O76071 339 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 LONRF2Q1L5Z9 754 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 FAM173BQ6P4H8 233 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 THRAP3Q9Y2W1 955 aaKnown RBP15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 MAP3K15Q6ZN16 1313 aa15.44■□□□□ 0.06
SYNGAP1-204ENST00000449372 CSF1RP07333 972 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 FERMT3Q86UX7 667 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 PDE11AQ9HCR9 933 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 NR1I2O75469 434 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 ME3Q16798 604 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 LEO1Q8WVC0 666 aaPredicted RBP15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 HAUS7Q99871 368 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 DBNDD2Q9BQY9 259 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 SLC27A2O14975 620 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 MCM6Q14566 821 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 LRRC31Q6UY01 552 aa15.43■□□□□ 0.06
SYNGAP1-204ENST00000449372 EXOC5O00471 708 aa15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 PCCAP05165 728 aaPredicted RBP15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 USP8P40818 1118 aa15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 GIGYF2Q6Y7W6 1299 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 C11orf57Q6ZUT1 292 aaPredicted RBP15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 PLEKHA4Q9H4M7 779 aa15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 APOBRQ0VD83 1088 aa15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 EDC3Q96F86 508 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 ERLIN2O94905 339 aa15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 SF3A1Q15459 793 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 HLFQ16534 295 aa15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 ADCK5Q3MIX3 580 aa15.42■□□□□ 0.06
SYNGAP1-204ENST00000449372 STARD3NLO95772 234 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 CALRP27797 417 aaKnown RBP15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 CCDC150Q8NCX0 1101 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 NEK1Q96PY6 1258 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 CDHR2Q9BYE9 1310 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 SFPQP23246 707 aaKnown RBP eCLIP15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 LRRC24Q50LG9 513 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 USPL1Q5W0Q7 1092 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 NECAB1Q8N987 351 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 CDCA7Q9BWT1 371 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 OSBPL5Q9H0X9 879 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 TFIP11Q9UBB9 837 aaKnown RBP15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 EYA2O00167 538 aa15.41■□□□□ 0.06
SYNGAP1-204ENST00000449372 SCP2P22307 547 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms