RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 PF4P02776 101 aa7.49□□□□□ -1.21
HMGB3P6-201ENST00000444896 GARTP22102 1010 aa7.49□□□□□ -1.21
HMGB3P6-201ENST00000444896 GBP2P32456 591 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P6-201ENST00000444896 PTPN11Q06124 597 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P6-201ENST00000444896 LRRC14Q15048 493 aa7.49□□□□□ -1.21
HMGB3P6-201ENST00000444896 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.49□□□□□ -1.21
HMGB3P6-201ENST00000444896 MRPL18Q9H0U6 180 aaKnown RBP7.49□□□□□ -1.21
HMGB3P6-201ENST00000444896 PCDHGB7Q9Y5F8 929 aa7.49□□□□□ -1.21
HMGB3P6-201ENST00000444896 MEGF11A6BM72 1044 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 F8W735 103 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 MSTNO14793 375 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 ALX3O95076 343 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 LIG1P18858 919 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 CAMK2GQ13555 558 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 PWP1Q13610 501 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 PLA2G4EQ3MJ16 856 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 EXOSC6Q5RKV6 272 aaKnown RBP7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 MAP1SQ66K74 1059 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 LLGL2Q6P1M3 1020 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 ACAD11Q709F0 780 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 USP48Q86UV5 1035 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 AGGF1Q8N302 714 aaeCLIP7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 GPBAR1Q8TDU6 330 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 KCNB2Q92953 911 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 GAL3ST3Q96A11 431 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 TMPRSS13Q9BYE2 586 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 KRT82Q9NSB4 513 aa7.48□□□□□ -1.21
HMGB3P6-201ENST00000444896 C9orf172C9J069 976 aa7.47□□□□□ -1.21
HMGB3P6-201ENST00000444896 TRIM37O94972 964 aa7.47□□□□□ -1.21
HMGB3P6-201ENST00000444896 IGHA1P01876 353 aa7.47□□□□□ -1.21
HMGB3P6-201ENST00000444896 LMNB2Q03252 620 aa7.47□□□□□ -1.21
HMGB3P6-201ENST00000444896 RUSC1Q9BVN2 902 aa7.47□□□□□ -1.21
HMGB3P6-201ENST00000444896 KCNQ5Q9NR82 932 aa7.47□□□□□ -1.21
HMGB3P6-201ENST00000444896 ADAMTS1Q9UHI8 967 aa7.47□□□□□ -1.21
HMGB3P6-201ENST00000444896 ERCC5P28715 1186 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P6-201ENST00000444896 NRG1Q02297 640 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P6-201ENST00000444896 ADGRE1Q14246 886 aa7.46□□□□□ -1.22
HMGB3P6-201ENST00000444896 SCARA3Q6AZY7 606 aa7.46□□□□□ -1.22
HMGB3P6-201ENST00000444896 FBXL19Q6PCT2 694 aa7.46□□□□□ -1.22
HMGB3P6-201ENST00000444896 TRIM42Q8IWZ5 723 aa7.46□□□□□ -1.22
HMGB3P6-201ENST00000444896 WDR18Q9BV38 432 aa7.46□□□□□ -1.22
HMGB3P6-201ENST00000444896 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 GREM1O60565 184 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 AOC2O75106 756 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 NOS3P29474 1203 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 EIF4A3P38919 411 aaKnown RBP7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 CHRNA4P43681 627 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 FAM160A1Q05DH4 1040 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 SEPT6Q14141 434 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 PDE3AQ14432 1141 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 KIF4BQ2VIQ3 1234 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 CD163Q86VB7 1156 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 WFDC12Q8WWY7 111 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 TGIF2Q9GZN2 237 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 PCDHGC5Q9Y5F6 944 aa7.45□□□□□ -1.22
HMGB3P6-201ENST00000444896 ITGB2P05107 769 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 GATA4P43694 442 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 MBTPS1Q14703 1052 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 BNC2Q6ZN30 1099 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 Q6ZS46 218 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 ZNF654Q8IZM8 581 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 SMG8Q8ND04 991 aaKnown RBP7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 ZNF296Q8WUU4 475 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 RNF208Q9H0X6 261 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 MIR1-1HGQ9H1L0 117 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 ACBD3Q9H3P7 528 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 AKTIPQ9H8T0 292 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 SUGCTQ9HAC7 445 aa7.44□□□□□ -1.22
HMGB3P6-201ENST00000444896 FAM221AA4D161 298 aa7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 F13A1P00488 732 aa7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 IREB2P48200 963 aaKnown RBP7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 CDK8P49336 464 aa7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 CCDC84Q86UT8 332 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 GOLM1Q8NBJ4 401 aa7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 JARID2Q92833 1246 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 EAF1Q96JC9 268 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 PPP1R9AQ9ULJ8 1098 aa7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 SYNGAP1Q96PV0 1343 aa7.43□□□□□ -1.22
HMGB3P6-201ENST00000444896 TMPRSS2O15393 492 aa7.42□□□□□ -1.22
HMGB3P6-201ENST00000444896 TIAF1O95411 115 aa7.42□□□□□ -1.22
HMGB3P6-201ENST00000444896 INPP5AQ14642 412 aa7.42□□□□□ -1.22
HMGB3P6-201ENST00000444896 ZC3H12AQ5D1E8 599 aaKnown RBP7.42□□□□□ -1.22
HMGB3P6-201ENST00000444896 HP1BP3Q5SSJ5 553 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P6-201ENST00000444896 NUTM2GQ5VZR2 741 aa7.42□□□□□ -1.22
HMGB3P6-201ENST00000444896 UBL7Q96S82 380 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P6-201ENST00000444896 RAD18Q9NS91 495 aa7.42□□□□□ -1.22
HMGB3P6-201ENST00000444896 PCDHA4Q9UN74 947 aa7.42□□□□□ -1.22
HMGB3P6-201ENST00000444896 CILPO75339 1184 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 DRD2P14416 443 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 LMNB1P20700 586 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 TNNI2P48788 182 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 SOX4Q06945 474 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 SNAP47Q5SQN1 464 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 FBXO27Q8NI29 283 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 GATAD2BQ8WXI9 593 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 MEGF10Q96KG7 1140 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
HMGB3P6-201ENST00000444896 SPON2Q9BUD6 331 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms