RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 UVSSAQ2YD98 709 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 NBPF10Q6P3W6 841 aaKnown RBP12.19□□□□□ -0.46
TOP3B-210ENST00000444502 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 CCAR2Q8N163 923 aaKnown RBP12.19□□□□□ -0.46
TOP3B-210ENST00000444502 NBPF15Q8N660 670 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 WASF1Q92558 559 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 EYA3Q99504 573 aa12.19□□□□□ -0.46
TOP3B-210ENST00000444502 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.19□□□□□ -0.46
TOP3B-210ENST00000444502 V9GYY5 206 aaPredicted RBP12.19□□□□□ -0.46
TOP3B-210ENST00000444502 TPM1P09493 284 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 LIG1P18858 919 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 GTF2IP78347 998 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 DOK7Q18PE1 504 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 NLRP10Q86W26 655 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 FAM200AQ8TCP9 573 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 GJD4Q96KN9 370 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-210ENST00000444502 TCP10Q12799 353 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 TEX11Q8IYF3 940 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 ERCC4Q92889 916 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-210ENST00000444502 LEO1Q8WVC0 666 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-210ENST00000444502 APPBP2Q92624 585 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 C16orf45Q96MC5 204 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-210ENST00000444502 ANO10Q9NW15 660 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 HDAC9Q9UKV0 1011 aa12.18□□□□□ -0.46
TOP3B-210ENST00000444502 ATF5Q9Y2D1 282 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-210ENST00000444502 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
TOP3B-210ENST00000444502 GTF2A1P52655 376 aaPredicted RBP12.17□□□□□ -0.46
TOP3B-210ENST00000444502 MYL10Q9BUA6 226 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 DENND2AQ9ULE3 1009 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
TOP3B-210ENST00000444502 PHKA1P46020 1223 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 PDIA6Q15084 440 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 CCDC186Q7Z3E2 898 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 SPATA5Q8NB90 893 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 CCDC194A0A1B0GVG4 234 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 A0A1B0GVL5 298 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
TOP3B-210ENST00000444502 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
TOP3B-210ENST00000444502 SERPINB2P05120 415 aa12.16□□□□□ -0.46
TOP3B-210ENST00000444502 CHRNDQ07001 517 aa12.16□□□□□ -0.46
TOP3B-210ENST00000444502 MYCNP04198 464 aaPredicted RBP12.16□□□□□ -0.46
TOP3B-210ENST00000444502 PRKG1Q13976 671 aa12.16□□□□□ -0.46
TOP3B-210ENST00000444502 TMEM132AQ24JP5 1023 aa12.16□□□□□ -0.46
TOP3B-210ENST00000444502 SUSD4Q5VX71 490 aa12.16□□□□□ -0.46
TOP3B-210ENST00000444502 CCDC102BQ68D86 513 aa12.16□□□□□ -0.46
TOP3B-210ENST00000444502 KAZALD1Q96I82 304 aa12.16□□□□□ -0.46
TOP3B-210ENST00000444502 H7C1W4 665 aa12.16□□□□□ -0.46
TOP3B-210ENST00000444502 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
TOP3B-210ENST00000444502 POLR3GO15318 223 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-210ENST00000444502 HSP90AA4PQ58FG1 418 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 KRT23Q9C075 422 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 PPIP5K2O43314 1243 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 FGAP02671 866 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 DDIT3P35638 169 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 MFSD14BQ5SR56 506 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 C2CD5Q86YS7 1000 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 KIAA0825Q8IV33 1275 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 FAM177A1Q8N128 213 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-210ENST00000444502 TTC14Q96N46 770 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 TRMT1Q9NXH9 659 aaKnown RBP12.15□□□□□ -0.46
TOP3B-210ENST00000444502 OGFRQ9NZT2 677 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 TAF6LQ9Y6J9 622 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 CYP2E1P05181 493 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-210ENST00000444502 RTN1Q16799 776 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 MAPKAPK5Q8IW41 473 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 NLGN1Q8N2Q7 840 aa12.15□□□□□ -0.46
TOP3B-210ENST00000444502 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-210ENST00000444502 THRAP3Q9Y2W1 955 aaKnown RBP12.15□□□□□ -0.46
TOP3B-210ENST00000444502 KIF5BP33176 963 aa12.15□□□□□ -0.47
TOP3B-210ENST00000444502 SCRN1Q12765 414 aa12.15□□□□□ -0.47
TOP3B-210ENST00000444502 C10orf67Q8IYJ2 551 aa12.15□□□□□ -0.47
TOP3B-210ENST00000444502 ZNF526Q8TF50 670 aaPredicted RBP12.15□□□□□ -0.47
TOP3B-210ENST00000444502 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.47
TOP3B-210ENST00000444502 NCAPD2Q15021 1401 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 MROH5Q6ZUA9 1318 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 PDE8BO95263 885 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 MMP10P09238 476 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 SCNN1DP51172 638 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 SKIDA1Q1XH10 827 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 TEX35Q5T0J7 233 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 GOLGA6L1Q8N7Z2 621 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 PHKBQ93100 1093 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 OSBP2Q969R2 916 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 GPR101Q96P66 508 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-210ENST00000444502 DSCC1Q9BVC3 393 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 JCADQ9P266 1359 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 SALL3Q9BXA9 1300 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 SPTLC2O15270 562 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 CTAGE5O15320 804 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 ZYXQ15942 572 aaKnown RBP12.14□□□□□ -0.47
TOP3B-210ENST00000444502 STX1AQ16623 288 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 CFAP100Q494V2 611 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 KLHL10Q6JEL2 608 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-210ENST00000444502 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-210ENST00000444502 MAST3O60307 1309 aa12.14□□□□□ -0.47
TOP3B-210ENST00000444502 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms