RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 RCOR1Q9UKL0 485 aa21.84■■□□□ 1.09
PMPCB-204ENST00000444457 NUP98P52948 1817 aa21.84■■□□□ 1.09
PMPCB-204ENST00000444457 TPM1P09493 284 aa21.83■■□□□ 1.09
PMPCB-204ENST00000444457 ITGA6P23229 1130 aa21.83■■□□□ 1.09
PMPCB-204ENST00000444457 HAND2P61296 217 aa21.83■■□□□ 1.09
PMPCB-204ENST00000444457 ENGASEQ8NFI3 743 aa21.83■■□□□ 1.09
PMPCB-204ENST00000444457 TTLL11Q8NHH1 800 aa21.83■■□□□ 1.09
PMPCB-204ENST00000444457 SYTL4Q96C24 671 aaPredicted RBP21.83■■□□□ 1.09
PMPCB-204ENST00000444457 PUS7LQ9H0K6 701 aaKnown RBP21.83■■□□□ 1.09
PMPCB-204ENST00000444457 GREM2Q9H772 168 aa21.83■■□□□ 1.09
PMPCB-204ENST00000444457 CARMIL3Q8ND23 1372 aa21.83■■□□□ 1.08
PMPCB-204ENST00000444457 FGAP02671 866 aa21.83■■□□□ 1.08
PMPCB-204ENST00000444457 SFPQP23246 707 aaKnown RBP eCLIP21.83■■□□□ 1.08
PMPCB-204ENST00000444457 IRX3P78415 501 aaPredicted RBP21.83■■□□□ 1.08
PMPCB-204ENST00000444457 CEBPZQ03701 1054 aaKnown RBP21.83■■□□□ 1.08
PMPCB-204ENST00000444457 HSP90AB3PQ58FF7 597 aa21.83■■□□□ 1.08
PMPCB-204ENST00000444457 EFCAB8A8MWE9 144 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 KINO60870 393 aaKnown RBP21.82■■□□□ 1.08
PMPCB-204ENST00000444457 LDHAL6AQ6ZMR3 332 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 CCDC73Q6ZRK6 1079 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 DISP2A7MBM2 1401 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 BCL9O00512 1426 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 A0A087WWV3 80 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 CCP110O43303 1012 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 TBC1D8O95759 1140 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 OAS2P29728 719 aaKnown RBP21.82■■□□□ 1.08
PMPCB-204ENST00000444457 CTSWP56202 376 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 ZSCAN26Q16670 478 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 FTOQ9C0B1 505 aaKnown RBP eCLIP21.82■■□□□ 1.08
PMPCB-204ENST00000444457 RSPH14Q9UHP6 348 aa21.82■■□□□ 1.08
PMPCB-204ENST00000444457 PPFIA3O75145 1194 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 SASH3O75995 380 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 SEC31AO94979 1220 aaKnown RBP21.81■■□□□ 1.08
PMPCB-204ENST00000444457 CYP19A1P11511 503 aaPredicted RBP21.81■■□□□ 1.08
PMPCB-204ENST00000444457 MCAMP43121 646 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 FAM160A1Q05DH4 1040 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 ATL3Q6DD88 541 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 MB21D2Q8IYB1 491 aaPredicted RBP21.81■■□□□ 1.08
PMPCB-204ENST00000444457 SLC4A9Q96Q91 983 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 GPHNQ9NQX3 736 aaPredicted RBP21.81■■□□□ 1.08
PMPCB-204ENST00000444457 MYO5AQ9Y4I1 1855 aaKnown RBP21.81■■□□□ 1.08
PMPCB-204ENST00000444457 ANKRD18BA2A2Z9 1011 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 MYO1CO00159 1063 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 GPAA1O43292 621 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 NRDCO43847 1150 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 MNS1Q8NEH6 495 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 USP28Q96RU2 1077 aa21.81■■□□□ 1.08
PMPCB-204ENST00000444457 TMC6Q7Z403 805 aa21.8■■□□□ 1.08
PMPCB-204ENST00000444457 ZNF396Q96N95 335 aaPredicted RBP21.8■■□□□ 1.08
PMPCB-204ENST00000444457 XPO4Q9C0E2 1151 aaKnown RBP21.8■■□□□ 1.08
PMPCB-204ENST00000444457 DNAI1Q9UI46 699 aa21.8■■□□□ 1.08
PMPCB-204ENST00000444457 FDPSP14324 419 aaKnown RBP21.8■■□□□ 1.08
PMPCB-204ENST00000444457 TNNT3P45378 269 aaPredicted RBP21.8■■□□□ 1.08
PMPCB-204ENST00000444457 GUCY1B3Q02153 619 aa21.8■■□□□ 1.08
PMPCB-204ENST00000444457 HOMER1Q86YM7 354 aa21.8■■□□□ 1.08
PMPCB-204ENST00000444457 BPIFA3Q9BQP9 254 aa21.8■■□□□ 1.08
PMPCB-204ENST00000444457 CWC15Q9P013 229 aaKnown RBP21.8■■□□□ 1.08
PMPCB-204ENST00000444457 ZBTB1Q9Y2K1 713 aa21.8■■□□□ 1.08
PMPCB-204ENST00000444457 IRS4O14654 1257 aaPredicted RBP21.79■■□□□ 1.08
PMPCB-204ENST00000444457 PRC1O43663 620 aa21.79■■□□□ 1.08
PMPCB-204ENST00000444457 CC2D1AQ6P1N0 951 aaPredicted RBP21.79■■□□□ 1.08
PMPCB-204ENST00000444457 TRIM65Q6PJ69 517 aa21.79■■□□□ 1.08
PMPCB-204ENST00000444457 VGLL2Q8N8G2 317 aa21.79■■□□□ 1.08
PMPCB-204ENST00000444457 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.79■■□□□ 1.081e-6■■■■□ 20.5
PMPCB-204ENST00000444457 CNNM1Q9NRU3 951 aa21.79■■□□□ 1.08
PMPCB-204ENST00000444457 NOP2P46087 812 aaKnown RBP21.79■■□□□ 1.08
PMPCB-204ENST00000444457 SMC1AQ14683 1233 aaKnown RBP21.79■■□□□ 1.08
PMPCB-204ENST00000444457 ILDR1Q86SU0 546 aaPredicted RBP21.79■■□□□ 1.08
PMPCB-204ENST00000444457 PSD3Q9NYI0 1048 aa21.79■■□□□ 1.08
PMPCB-204ENST00000444457 LTBP4Q8N2S1 1624 aa21.78■■□□□ 1.08
PMPCB-204ENST00000444457 COL14A1Q05707 1796 aaKnown RBP21.78■■□□□ 1.08
PMPCB-204ENST00000444457 NCOA7Q8NI08 942 aa21.78■■□□□ 1.08
PMPCB-204ENST00000444457 ZNF512BQ96KM6 892 aaPredicted RBP21.78■■□□□ 1.08
PMPCB-204ENST00000444457 ZCCHC17Q9NP64 241 aaKnown RBP21.78■■□□□ 1.08
PMPCB-204ENST00000444457 PLCH1Q4KWH8 1693 aa21.78■■□□□ 1.08
PMPCB-204ENST00000444457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.77■■□□□ 1.08
PMPCB-204ENST00000444457 ADD2P35612 726 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 ANTXR2P58335 489 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 REXO1L1PQ8IX06 675 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 GOLGA5Q8TBA6 731 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 IFNKQ9P0W0 207 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 TRMT112Q9UI30 125 aaKnown RBP21.77■■□□□ 1.08
PMPCB-204ENST00000444457 ATRNO75882 1429 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 ZNF213O14771 459 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 FANCGO15287 622 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 SMC2O95347 1197 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 FBXO18Q8NFZ0 1043 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 LCMT1Q9UIC8 334 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 PARP3Q9Y6F1 533 aa21.77■■□□□ 1.08
PMPCB-204ENST00000444457 KLF18A0A0U1RQI7 1052 aa21.76■■□□□ 1.07
PMPCB-204ENST00000444457 RALYLQ86SE5 291 aaKnown RBP21.76■■□□□ 1.07
PMPCB-204ENST00000444457 IQUBQ8NA54 791 aa21.76■■□□□ 1.07
PMPCB-204ENST00000444457 EXOC4Q96A65 974 aa21.76■■□□□ 1.07
PMPCB-204ENST00000444457 CARD6Q9BX69 1037 aa21.76■■□□□ 1.07
PMPCB-204ENST00000444457 YY1AP1Q9H869 796 aa21.76■■□□□ 1.07
PMPCB-204ENST00000444457 GOLGA8BA8MQT2 603 aa21.76■■□□□ 1.07
PMPCB-204ENST00000444457 CASQ1P31415 396 aa21.76■■□□□ 1.07
PMPCB-204ENST00000444457 TTF1Q15361 905 aaPredicted RBP21.76■■□□□ 1.07
PMPCB-204ENST00000444457 AK7Q96M32 723 aa21.76■■□□□ 1.07
PMPCB-204ENST00000444457 HPS5Q9UPZ3 1129 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms