RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 ZNF697Q5TEC3 545 aa7.1□□□□□ -1.27
TM9SF3-202ENST00000443638 RUFY4Q6ZNE9 571 aa7.1□□□□□ -1.27
TM9SF3-202ENST00000443638 RNF180Q86T96 592 aa7.1□□□□□ -1.27
TM9SF3-202ENST00000443638 JARID2Q92833 1246 aaPredicted RBP7.1□□□□□ -1.27
TM9SF3-202ENST00000443638 CCDC136Q96JN2 1154 aa7.1□□□□□ -1.27
TM9SF3-202ENST00000443638 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
TM9SF3-202ENST00000443638 TMEM39AQ9NV64 488 aa7.1□□□□□ -1.27
TM9SF3-202ENST00000443638 TLR7Q9NYK1 1049 aaKnown RBP7.1□□□□□ -1.27
TM9SF3-202ENST00000443638 TCEAL9Q9UHQ7 104 aa7.1□□□□□ -1.27
TM9SF3-202ENST00000443638 J3QL48 77 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 KIF3BO15066 747 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 TSPAN6O43657 245 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 ALDH1L1O75891 902 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 MAP3K6O95382 1288 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 MYCLP1P12525 358 aaPredicted RBP7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 GNALP38405 381 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 EPHB1P54762 984 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 C21orf62-AS1Q17RA5 79 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 PRICKLE2Q7Z3G6 844 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 TTC6Q86TZ1 520 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 NCAPG2Q86XI2 1143 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 SLC39A13Q96H72 371 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 PCGF6Q9BYE7 350 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 CYP8B1Q9UNU6 501 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 PCDHB14Q9Y5E9 798 aa7.09□□□□□ -1.27
TM9SF3-202ENST00000443638 GSG1L2A8MUP6 293 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 GDF9O60383 454 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 FAM157BP0CG42 384 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 RARAP10276 462 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 CNGA1P29973 690 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 UBE4AQ14139 1066 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 PPP2R5EQ16537 467 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 MAP9Q49MG5 647 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 ZC3H12BQ5HYM0 836 aaKnown RBP7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 LYSMD3Q7Z3D4 306 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 KRT25Q7Z3Z0 450 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 LINC00528Q8N1L1 170 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 TAB3Q8N5C8 712 aaPredicted RBP7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 SLC26A8Q96RN1 970 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 SPOCK3Q9BQ16 436 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 SPATA9Q9BWV2 254 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 GPN3Q9UHW5 284 aaPredicted RBP7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 GJA3Q9Y6H8 435 aa7.08□□□□□ -1.28
TM9SF3-202ENST00000443638 NME2P22392 152 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 GUCY2CP25092 1073 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 SOX5P35711 763 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 SFSWAPQ12872 951 aaKnown RBP7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 TTF1Q15361 905 aaPredicted RBP7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 PERM1Q5SV97 790 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 HGSNATQ68CP4 663 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 EEPD1Q7L9B9 569 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 AFAP1L2Q8N4X5 818 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 ZBTB38Q8NAP3 1195 aaPredicted RBP7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 STK35Q8TDR2 534 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 RPS6KC1Q96S38 1066 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 TM9SF2Q99805 663 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 ANTXR1Q9H6X2 564 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 SAMM50Q9Y512 469 aa7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.07□□□□□ -1.28
TM9SF3-202ENST00000443638 PRR36Q9H6K5 1346 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 WASHC2CQ9Y4E1 1318 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 FAM187AA6NFU0 413 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 IRS4O14654 1257 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 PDE8AO60658 829 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 BPNT1O95861 308 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 PSAPP07602 524 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 RPL6Q02878 288 aaKnown RBP7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 PABPC4Q13310 644 aaKnown RBP eCLIP7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 BIRC2Q13490 618 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 CBX2Q14781 532 aaPredicted RBP7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 SLC10A6Q3KNW5 377 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 AKAP4Q5JQC9 854 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 SCARA3Q6AZY7 606 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 APBA2Q99767 749 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 RUBCNLQ9H714 662 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 MCM8Q9UJA3 840 aa7.06□□□□□ -1.28
TM9SF3-202ENST00000443638 CCDC163A0A0D9SF12 145 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 TNFRSF10AO00220 468 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 PDE2AO00408 941 aaPredicted RBP7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 CREB3O43889 395 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 B3GALT4O96024 378 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 RHOQP17081 205 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 SMPD1P17405 629 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 LMNB1P20700 586 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 NFKB2Q00653 900 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 PLAURQ03405 335 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 PTPN11Q06124 597 aaPredicted RBP7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 PPP2R3AQ06190 1150 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 MCL1Q07820 350 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 ZNF252P-AS1Q0IIN9 211 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 LRRC14Q15048 493 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 GRIN3AQ8TCU5 1115 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 EVI5LQ96CN4 794 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 MUC3BQ9H195 1237 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 EPN3Q9H201 632 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 EFCC1Q9HA90 598 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 HCN2Q9UL51 889 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 MAPRE3Q9UPY8 281 aa7.05□□□□□ -1.28
TM9SF3-202ENST00000443638 NFKB1P19838 968 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 NCAPHQ15003 741 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms